Aspergillus luchuensis: AKAW2_51720S
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Entry
AKAW2_51720S CDS
T08060
Symbol
RSE1
Name
(RefSeq) pre-mRNA-splicing factor rse1
KO
K12830
splicing factor 3B subunit 3
Organism
aluc
Aspergillus luchuensis
Pathway
aluc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aluc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
AKAW2_51720S (RSE1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aluc03021
]
AKAW2_51720S (RSE1)
03041 Spliceosome [BR:
aluc03041
]
AKAW2_51720S (RSE1)
03036 Chromosome and associated proteins [BR:
aluc03036
]
AKAW2_51720S (RSE1)
Transcription machinery [BR:
aluc03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
AKAW2_51720S (RSE1)
Spliceosome [BR:
aluc03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
AKAW2_51720S (RSE1)
Complex B
AKAW2_51720S (RSE1)
Complex C
U2 SnRNP specific factors
AKAW2_51720S (RSE1)
Chromosome and associated proteins [BR:
aluc03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
AKAW2_51720S (RSE1)
TFTC complex
AKAW2_51720S (RSE1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
CPSF_A
Beta-prop_RSE1_2nd
Motif
Other DBs
NCBI-GeneID:
64962700
NCBI-ProteinID:
XP_041545141
UniProt:
A0A146FUQ6
LinkDB
All DBs
Position
5:join(5243772..5244015,5244190..5246263,5246454..5247738,5247791..5247817)
Genome browser
AA seq
1209 aa
AA seq
DB search
MATTSHMFMYSLTIQPPTAITQAILGQFAGTKEQQIVTASGSKLTIHRPDPTQGKVTPLF
SQDVFGIIRSLAAFRLAGSSKDYIIIGSDSGRITIIEYVPSQNRFNRIHLETFGKSGVRR
VIPGQYLAVDPKGRACIIASVEKNKLVYVLNRNSQAELTISSPLEAHKPQTLVFAMTALD
VGYENPVFAALEVDYSESDQDPTGQAFEELEKHLVYYELDLGLNHVVRKWSDPVDRTASL
LFQVPGGADGPSGVLVCAEDSVTYRHSNQDAFRVPIPRRSGATENPERKRSITAGVMHKM
RGAFFFLIQTEDGDLFKLTIDMVEDDNGQLTGEVKRLKIKYFDTVPLASSLLILKSGFLY
VASEAGNHHFYQFEKLGDDDEEIEFTSEAFSADPSVPCDPIYFRPRGAENLNLVETINSL
NPLIDSKVVNITEDDAPQIYTISGAGARSSFRTLKHGLEVSEIVESELPSVPSAVWTTKL
TRSDEFDAYIILSFANGTLVLSIGETVEEVTDTGFLSTAPTLAVQQLGEDSLIQIHPRGI
RHILADRRVNEWPAPQHRSIVAAATNERQVAVALSSGEIVYFEMDSDGSLAEYDERRQMS
GTVTCLSLGEVPEGRVRSSFLAVGCDDSTVRILSLDPDSTLENKSVQALTAAPSALNIMS
MADSSSGGTTLYLHIGLYSGVYLRTVLDEVTGELSDTRTRFLGSKAVKLFQVSVKGQTAV
LGLSSRPWLGYSDVQTKGFMLTPLDYVGLEWGWNFSSEQCVEGMVGIQGQNLRIFSIEKL
DNNMLQQSIPLSYTPRRFLKHPEQPLFYVIESDNNVLSPSTRAKLLEDSKSRGGDETVLP
PEDFGYPRATGHWASCIQVVDPLDAKAVVHTIELEENEAAISIAAVPFTSQDDETFLVVG
TAKDMSVNPPKSAGGYIHIYRFQEDGRELEFIHKTKVEEPPLALLGFQGRLVAGIGSLLR
IYDLGMKQLLRKCQAPVVPKTIVGLQTQGSRIVVSDVRESVTYVVYKYQENVLIPFVDDS
VSRWTTATTMVDYETTAGGDKFGNLWLLRCPKKTSEEADEDGSGAHLIHERGYLQGTPNR
LELMIHVYTQDIPTSLHKTQLVAGGRDILVWTGFQGTIGMLVPFIGREDVDFFQNLEMQL
AAQHPPLAGRDHLIYRSYYAPVKGVIDGDLCEMYFLLPNDTKMMIAAELDRSVREIERKI
SDMRTRVAY
NT seq
3630 nt
NT seq
+upstream
nt +downstream
nt
atggcgactacttcgcacatgttcatgtactccttgacgatccagcctccaactgcgatc
acccaggccattctcggtcaatttgctgggaccaaggagcagcagattgtcaccgcgtcc
ggatcgaagctcacgatccatcgtcccgatcccacccagggcaaggtcacgccgctcttt
tcccaagatgtctttggcatcatccgctcgctggcagccttcagactggccggtagtagc
aaagattacatcatcattggctcggattcgggacgcatcactatcattgagtatgtgccg
tctcagaaccggttcaaccggattcatctcgagacatttggcaagtcgggtgtccgccgt
gtcatcccaggccagtatttggctgtggatcccaagggccgtgcgtgtattatcgcttct
gttgagaagaacaagcttgtatacgtcctgaatcgaaactcgcaggccgagctgacgatc
tcgtccccgcttgaagcccacaagccgcagacactggtgtttgccatgacggcgttggat
gtcgggtatgaaaacccggtcttcgcagcgcttgaggtcgactactcagagtctgatcag
gaccccactggccaggctttcgaggagctggagaagcatctggtctactatgagctggat
cttggactcaatcatgtagtccgcaagtggtccgatcccgttgatcgcacggcttctctt
ctcttccaggtccctggaggcgcagacggtcccagtggtgtgttggtgtgtgcggaggac
agtgttacctaccgtcactccaaccaagatgcgttccgagtgccaattcctcggcgcagc
ggtgccactgagaacccggagcgtaagcgttccatcacggccggtgtgatgcacaagatg
aggggtgctttcttctttctcattcagactgaagacggtgatctcttcaagctcaccatc
gacatggttgaagatgacaacggtcagctcacgggtgaagtcaagcgactgaaaatcaag
tactttgacactgttccgctggcttccagcttgttgatcctgaagagtggtttcctctat
gttgccagtgaggctggtaaccatcatttctaccagtttgagaagctgggtgacgatgat
gaggagattgagttcacgagcgaggctttctccgctgatccatcagtcccttgtgacccc
atttatttccggccaagaggtgcagagaacctcaaccttgttgaaaccatcaactccctc
aacccattgattgacagcaaggtggtcaacatcaccgaggacgatgcgcctcaaatctac
actatttctggcgctggcgctcggagcagtttcaggacgctcaagcatggcttggaagta
tccgaaattgtcgaatcagagctgcccagtgtgccttctgcggtctggacgaccaagctc
accagatccgatgagtttgatgcttacatcattctctcctttgccaacggaactcttgtg
ctcagcattggcgagaccgtcgaggaagttaccgacactggtttcctatccaccgcacca
accttggctgttcagcagctcggcgaggactctttgattcaaatccaccccaggggtatc
cgtcacattctcgcagatcgtcgggtgaatgagtggcctgcccctcagcatcggtcgatt
gtcgcagccgcaaccaacgagcgtcaagtcgccgttgctctcagttccggcgagatcgtc
tactttgagatggactctgacgggtccttggctgagtatgacgagcgccgtcaaatgtca
ggcacggttacctgtctcagtctgggcgaagttcccgaaggtcgtgttcggagctcgttc
ttggctgtcggctgtgacgactcgactgtccgtattctgagcttggaccctgactctact
ctggagaacaagtcggttcaagccctgaccgctgctccttcggccctgaacatcatgtca
atggctgattccagttccggaggaactaccttgtatttgcacattggtctgtattccggt
gtctacctgcggacagttctggacgaggtcaccggtgaactctcggatactcgcacgcgt
tttctgggatctaaagctgtgaagcttttccaggtgtctgtcaagggacaaacggcagtg
ctgggcctgagctcgcgtccctggcttgggtattctgatgttcaaacgaagggcttcatg
cttactccactcgattacgttgggctcgaatggggctggaacttttcaagtgaacagtgc
gtggagggcatggtcggtatccagggacaaaatctacggattttctctatcgagaagctg
gacaacaacatgttgcaacagtcgattccgctctcgtatactccacgccgcttcctgaag
catcctgagcagccgttgttctacgttattgaatctgacaacaatgttctgtctccctct
accagagccaagctgctggaggattcaaagtcccgtggcggtgacgaaaccgttcttcca
cccgaagacttcggatacccccgggccacagggcattgggcttcttgtattcaagtggtt
gatcccttggatgccaaggcagttgttcataccatcgagctggaagagaatgaagcggcg
attagcattgctgcagtcccattcaccagccaggatgatgagacgttcctggtggtagga
acagccaaagacatgagtgtcaacccgcccaaatccgccggtggctatatccacatttac
cgcttccaggaggatggaagagagctggagttcatccacaagaccaaggtcgaggaacca
cctcttgcgttgctgggattccagggccgcctggttgctggtatcgggtcattgcttcgc
atttatgatcttggcatgaaacagctccttcgtaagtgtcaggcgccggttgtgccaaag
accatcgttggtctgcagacccagggatctcgcattgtcgtcagcgacgttcgcgaaagt
gtcacgtatgtcgtgtacaagtatcaagagaacgtgttgattccgtttgtggatgattcc
gtgtctcgctggaccactgccaccactatggttgactatgaaaccactgccggtggtgac
aagtttggcaacctttggctcctccgttgcccgaagaagacgtctgaagaggcggatgag
gatggatcgggcgcgcatttgattcacgaacgcggctatctccagggcactcccaatcgc
ttggagctgatgatccatgtgtatactcaggacatcccaacgagcttgcacaagactcaa
cttgtagcaggtggtcgggacatcctcgtctggactggtttccagggcacgattggtatg
ttggtgccattcatcggccgagaggatgtggacttcttccaaaacctggagatgcagtta
gctgcacagcaccctcctctcgctggacgggaccacctgatctaccgcagttactatgcg
ccggtcaagggtgtcattgacggagacctgtgcgagatgtactttttattgcctaatgat
acgaagatgatgatcgcagcggaactggaccgttctgtccgggaaatcgagcgcaagatt
tcggacatgcggaccagggtggcgtattaa
DBGET
integrated database retrieval system
