Aspergillus luchuensis: AKAW2_61162A
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Entry
AKAW2_61162A CDS
T08060
Symbol
SUB2
Name
(RefSeq) suppressor of the cold-sensitive snRNP biogenesis mutant brr1-1
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
aluc
Aspergillus luchuensis
Pathway
aluc03013
Nucleocytoplasmic transport
aluc03015
mRNA surveillance pathway
aluc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aluc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
AKAW2_61162A (SUB2)
09122 Translation
03013 Nucleocytoplasmic transport
AKAW2_61162A (SUB2)
03015 mRNA surveillance pathway
AKAW2_61162A (SUB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aluc03019
]
AKAW2_61162A (SUB2)
03041 Spliceosome [BR:
aluc03041
]
AKAW2_61162A (SUB2)
Enzymes [BR:
aluc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AKAW2_61162A (SUB2)
Messenger RNA biogenesis [BR:
aluc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
AKAW2_61162A (SUB2)
Spliceosome [BR:
aluc03041
]
Complex C
Other components
EJC/TREX
AKAW2_61162A (SUB2)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
AKAW2_61162A (SUB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Orbi_VP6
Motif
Other DBs
NCBI-GeneID:
64964219
NCBI-ProteinID:
XP_041546660
LinkDB
All DBs
Position
6:complement(join(3343427..3343472,3343525..3343782,3343833..3344193,3344246..3344656,3345256..3345502))
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AA seq
440 aa
AA seq
DB search
MSHEEDLIDYSDEELQTTDAAATTAAPASNGEAKKGDLTVSGGRPDKKGSYVGIHSTGFR
DFLLKEELLRAITDCGFEHPSEVQQVCIPTAILNVDVLCQAKSGLGKTAVFVLTTLHQLE
PVPGECSILVMCHTRELAYQIKNEYARFSKYLPDVKTAVFYGGTPIQKDVELLSNKESYP
NIVVGTPGRLNALVRDKKLSLRNVKAFVLDECDKMLDQIDMRRDVQEIFRATPADKQVMM
FSATLSQDIRPVCKKFMRNPLEVYVDDDTKLTLHGLQQYYIKLSEAEKNRKLNELLDSLE
FNQVIIFVKSTLRANELDKLLRECNFPSIAVHSGVSQEERIKRYKEFKEFNKRICVATDV
FGRGIDIERINLAINYDLPADADSYLHRVGRAGRFGTKGLSISFVSTEDDEKVLKDIEKR
FEVALPEYPEGGVDSSTYMA
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgtctcacgaagaggatctcatcgactactccgacgaggagcttcagaccactgacgcg
gcggccaccaccgctgcccccgcctctaacggagaggctaagaagggcgacttgacagtt
tctggcggccgtccggacaagaagggtagttacgtcggtattcattcgaccggtttccgc
gactttttgctcaaagaggaactcctacgtgccatcaccgattgcggtttcgaacatcca
tcggaggtccagcaagtctgcattcctaccgctatcctgaacgtcgatgttctctgccag
gccaagtctggtctcggaaagaccgcggtcttcgttttgaccaccctgcaccagctggaa
ccggttcctggcgagtgctctatccttgttatgtgccacacccgcgagttggcataccag
atcaagaacgagtacgctcgtttcagcaagtaccttcccgatgtcaagactgccgtcttc
tacggaggtacccccatccagaaggacgttgagttgctctccaacaaggagtcctacccc
aacattgttgtcggtactcccggtcgtctgaacgccttggtccgcgacaagaagctttct
ctgcgcaacgtcaaggctttcgttctcgatgagtgtgataagatgctggaccagattgac
atgcgtcgtgatgtccaggagattttccgtgccacccctgccgacaagcaggtcatgatg
ttcagtgccactctttctcaggatatccgccccgtgtgcaagaagttcatgaggaaccct
ctcgaagtctacgtcgatgacgacacgaagcttacgctgcacggtctgcagcaatactac
atcaagctcagcgaagcggagaagaaccgcaagctgaacgagctcctggacagcctggag
ttcaaccaggttatcatcttcgttaagagcaccctgcgtgcgaatgagctcgacaagctg
ttgcgcgaatgcaacttccctagtatcgcggtgcactctggtgtcagccaggaggagcgt
atcaaacgctacaaggagttcaaggaattcaacaagcgtatctgtgtcgccactgacgtg
ttcggacgtggtatcgatattgagcgtatcaaccttgccatcaactacgacttgccggct
gatgccgactcctacctgcaccgtgtcggtcgtgcgggtcgtttcggtaccaagggtctg
tcgatctccttcgtcagcaccgaggatgacgagaaggtgctcaaggatattgagaagcgc
ttcgaggttgcccttcctgaataccccgagggcggtgttgactcgagcacttacatggcc
tag
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