Aspergillus luchuensis: AKAW2_80923A
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Entry
AKAW2_80923A CDS
T08060
Symbol
RRP4
Name
(RefSeq) exosome non-catalytic core subunit rrp4
KO
K03679
exosome complex component RRP4
Organism
aluc
Aspergillus luchuensis
Pathway
aluc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aluc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AKAW2_80923A (RRP4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aluc03019
]
AKAW2_80923A (RRP4)
Messenger RNA biogenesis [BR:
aluc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
AKAW2_80923A (RRP4)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
AKAW2_80923A (RRP4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
S1_RRP4
ECR1_N
KH_6
RRP40_S1
Motif
Other DBs
NCBI-GeneID:
64966443
NCBI-ProteinID:
XP_041548884
UniProt:
A0A146FST5
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Position
8:complement(join(2588614..2589565,2589626..2589846))
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AA seq
390 aa
AA seq
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MAITILPPVVEDVDVPYSDSEDDAMSVDSDGGVDLAAGDATRPSKRVRLVEGTNIGAGVL
TPGEIVTDDPQWMRGHGTYTNPLSTSIIATVAGTVQKTNKLLSVQPLRARYTPEIGDLVV
GRIVEVQSRRWKVDVAAPLLAQLPLSAINLPGGILRRRTSADELQIRTFFSEGDLVVAEV
QSVHSDGGASLHTRSLKYGKLRNGVFLAVTGTGGSGASSSSVKGTSGASATGAGAGGAAG
AGGVVRSRRQVWTINTANGGGDVDVILGVNGYIWISKHADGAAAASSTTENVSITRMEEM
VSSSIYSSQNDDIPPQTRREIARLAQCIRVLVNGGVRVDEETVMGAYEASLQVDLEVGDE
EDEEDRGKEGREYLEGDKARRILDLVLQQL
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atggccattactattcttcctccggttgtggaggatgtcgacgttccttactccgattcg
gaggacgatgccatgtccgtggattcagatggaggagtcgatctagcagcgggagatgcc
acaagacctagcaagcgggttcgcttagtggagggaacaaatattggcgctggagttctc
acaccgggtgagatcgtaacagacgacccgcaatggatgagaggacacggcacgtacaca
aacccactatccacctccatcattgccaccgtcgccggtacggttcagaagaccaacaaa
ctgctctccgtccagcccctacgcgcccgctatacgcctgagatcggtgacctggtggtg
gggcgcattgtcgaggtgcagtctcgccgatggaaggttgatgtcgctgctccccttctc
gcacagcttcccctctccgctatcaacttgcctggtggtatcttgcgtcgacgaacgagc
gccgatgaactacaaatccgaaccttcttcagcgagggtgacctcgtcgttgctgaagtc
cagtcggtacattcggacggaggcgcctcgctgcacacccggtcgctgaagtatggtaaa
ttgaggaacggcgtgtttcttgcggtgacggggacgggtggcagtggtgcgtccagctcg
tcggtcaaaggtacttcgggagcgagtgctacgggagcgggagccggaggtgcagcgggt
gctggtggagtggttcggtcgcgcagacaggtctggacgatcaataccgccaatggaggt
ggggatgtggatgtgattttgggagttaatggatacatctggatttctaagcacgccgat
ggagcggctgctgcatcgtcgacaacggagaatgtgtcaatcacgcgcatggaggaaatg
gtgtcgagttccatctactcgagtcagaacgatgacatcccgccacagacgcgtcgggaa
attgcccggttggcgcagtgcattcgggtgcttgtcaacggaggagtccgggtggacgag
gagacggtgatgggagcctacgaagccagcttacaggtggatctggaggtgggagatgaa
gaggatgaggaagatcggggcaaggagggcagagaatacctggagggcgacaaggctcgt
cggattctggatttggtgctacaacaactatag
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