Anastrepha ludens (Mexican fruit fly): 128854820
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Entry
128854820 CDS
T10909
Name
(RefSeq) SKI2 subunit of superkiller complex protein
KO
K12599
antiviral helicase SKI2 [EC:
5.6.2.6
]
Organism
alud Anastrepha ludens (Mexican fruit fly)
Pathway
alud03018
RNA degradation
Brite
Enzymes [BR:
alud01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
128854820
Messenger RNA biogenesis [BR:
alud03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
128854820
mRNA degradation factors
3'-5' decay
Ski complex
128854820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
128854820
NCBI-ProteinID:
XP_053945206
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Position
2:96628647..96632961
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AA seq
1192 aa
AA seq
DB search
MDENIQKLQNYIISPELPIHNPLPEIIPRQCDTTRLMHLPKGATSTKLVPRRDFITGEII
EFVEVDLVDVGANACNSTSMRREPGLLMEATRGSAMNFPFWPGGFDEPPREIMKPNIDLD
LGTELLTVPPGFQKGYNFEDSMLKVISGGTVLGGSNNVNLLKNLEKDLDVQEWLKLAEQP
TEADSVTDFNNSGEFKDVEEQIMSADLKPVLEISNTNTKSAFSSEWAEMVDISQPITNFK
DKIPCPAMTYPFELDVFQKQAIIKLEERQYVFVAAHTSAGKTVVAEYAIALSQRDLTRTI
YTSPIKALSNQKYRDFKKTFKDVGLITGDLQIDPTASCLIMTTEILRSMLYCGSEITRDL
EYVIFDEVHYINNPERGHVWEEVIILLPDHVNIIMLSATVPNTLELADWVGSTKKRKVYV
ISTLKRPVPLMHYLYTGCGGKSKDDIYLLVDADGNYLQKNYERAVERKKEMQSKSKGGQS
GGPPAKNFVSAKQDQNMWIGLIDFLKRNQKMPVVAFTLSRNRCDINLQALQSVDLNTARE
KGSVQKFFQQCLQKLKPPDRQLPQVLTMKDSLERGIGVHHSGILPILKEIVEMLFQSGLV
KLLFATETFAMGVNMPARTVIFDSHRKYDGIEVRNLKPGEYIQMAGRAGRRGHDENGTVI
LLCKAQVPPSMDLRSMILGQPEKLQSQFILRYAVILTCLRIESIKVEDIIQFSFKEFNQK
LQIPAQKKQLEVAQDKFSQLPELGEHLQPLCRFYELAQEYLTERQRLMKFLLSQPKIAKE
LKVGRVLVVTQGRHYNKLGIILSIKSTPGKDTIYRLLVLQHQFKAIDQKDNFHRSEMYYK
IVSLTPQHKFFQPEGIGGHDVIDVKAVDIVEITKSTIKVDGDVIIRNWEQRQIERFRDTP
PGATVVKAVSELQQLNQNYIDKPETLKFMNISKEINLSQENELAQIRYTEHLWKQLLAVL
PHTNIAGYEQEFATVYERKVLERRIEELKFKNSTKNLSLYPDYCNKLKVLRALKYIDDLD
EVTLKGKVACEMGQNELLITELILCNMFNDLQPAEIAALLSGLVFQGKIQGEPVIPEKLK
KCVKEFEDINDTILAEELRHQTIVESDNRLNFGLLEVVYEWARNKPFAEIMKLTEVQEGI
IVRCIQQLDETLRDVKTAAIRIGNPTLQSKMEEASTAIKRDIVFTASLYTAL
NT seq
3579 nt
NT seq
+upstream
nt +downstream
nt
atggatgaaaatatacaaaaattgcaaaattatattataagtccggaattgccaatacat
aatcccttgccggaaataataccgcgacaatgtgatacaactcgtctgatgcatttaccg
aaaggtgctaccagcaccaaactggtgccacgtcgtgactttatcacaggcgagatcatt
gagtttgttgaggttgatttagtagatgtgggagcgaatgcatgcaattctacctcaatg
cgacgagaacccggactgcttatggaagcaactcgaggttccgctatgaactttcctttc
tggccgggtggattcgacgagcctccacgagaaatcatgaaaccgaacattgacttggat
ttaggcacagagttgctgacagtgccaccaggatttcaaaaaggctataattttgaggat
agcatgttgaaagtgatttcgggaggtacagtgttaggagggagtaataatgtcaaccta
ttaaaaaacctggaaaaagatcttgatgttcaggaatggctcaaactggcagaacaacca
acggaagcggattctgtaactgattttaataactcaggcgaatttaaagatgttgaagag
cagattatgagcgcagacctgaaacccgtacttgaaatatcgaatacaaatactaaatcg
gcatttagcagcgaatgggctgaaatggtagatatttcacagcctattacgaacttcaaa
gataagattccgtgtcccgccatgacctacccatttgagttggatgtatttcagaagcag
gctattattaaattagaagagcgacaatatgtctttgttgcagcgcatacatctgccggt
aaaacagtagtggcagagtatgcaatagccttgtcacaacgggacctaacgcgcacaata
tacacttcacctattaaagcgctgtcaaatcaaaaatatcgagactttaagaaaactttt
aaagacgttggactaataaccggtgatttacaaattgatcccactgcttcgtgccttatt
atgaccacggagattctacggtcaatgctttattgcggtagtgaaataacacgagacctc
gaatacgtaatttttgacgaagtacactatataaacaatcctgagcgcggtcatgtgtgg
gaagaggtaataatattactcccagaccatgtaaatataatcatgttgagcgctactgtg
ccgaacacgttagaattggccgactgggttggcagcaccaaaaaaagaaaagtctatgtg
ataagcacacttaaacgtccagtcccacttatgcattacctttacaccggctgtggtgga
aaaagtaaagacgacatatatttactagtagacgctgatggtaactatctgcagaaaaat
tacgagcgggcggtagagcgcaaaaaagaaatgcaatccaaatcaaagggtggtcagagt
ggtggtccgccagcaaaaaatttcgtaagcgctaagcaagatcaaaacatgtggattggg
ctgatagactttctgaaacgcaatcaaaaaatgcccgtcgtcgcatttacattatcacgc
aatcgctgtgacattaatttacaggctttgcaatcagttgacttaaatactgcccgcgaa
aaaggttctgttcaaaaattctttcagcaatgcttacaaaagcttaaaccgccagaccgt
caattaccacaagttcttacaatgaaagactcacttgagcgcggaatcggcgttcaccac
agtgggatacttcccatactaaaggagattgtggagatgctctttcaatccggtttggtt
aaactactcttcgcgacggaaacttttgcaatgggtgtcaatatgcctgctcgtacagtt
atatttgattcgcaccgcaaatatgatggaattgaggtgcgaaatctgaagccaggcgaa
tatatccaaatggccggacgtgccggtcgtcgaggacatgatgaaaacggcactgtgata
ttattgtgcaaagcacaggtgccgccttcgatggatctgcgctcaatgatactaggccaa
ccagaaaagttacaatcgcaatttatattgcgttatgccgtcatattaacttgcctgcgc
attgaaagcattaaagtagaggacataattcagttcagtttcaaagagtttaatcaaaag
cttcaaataccagcgcagaagaaacaactggaagtggcgcaagacaagttttcccaacta
cccgaactgggtgaacacctacagccactatgtcgattctacgaactcgctcaggaatat
ctcactgagcggcaacgtctcatgaaatttttgttatcgcaacctaaaatagcgaaagaa
ttgaaagttggtagggtgcttgtggttacacaaggcagacactacaacaagttgggtata
atactttctataaaatctactccaggaaaagatacaatatacagattattagtattgcaa
catcagtttaaagcaattgaccagaaggataactttcatcgcagtgaaatgtactacaaa
atagtgtcattaactccacagcacaagttcttccagcccgagggtatcggtggccatgac
gtaatcgatgtaaaagccgtcgatatagttgagattacgaaaagcaccataaaagttgat
ggcgatgtaataattcgcaattgggagcaacgtcaaatcgaacgtttcagggatacccca
ccaggtgcaactgtggtgaaggcagtaagtgagttacaacaactcaaccaaaattacata
gacaaaccggaaacgttgaaattcatgaacatctcaaaagagattaatttaagtcaggag
aatgaattagcgcaaattcgctacacggagcatttgtggaagcagcttctcgcagtattg
cctcatacgaacattgctggttatgaacaagaattcgccactgtttatgagcgcaaagtg
ttggaacggcgtatagaggagttgaagtttaaaaattcgactaaaaatctctcactttat
ccggattactgcaataaattgaaggtgttgcgtgctcttaagtacatcgatgatttggac
gaggttaccttaaaaggcaaagttgcttgtgaaatggggcagaacgagctattaataacc
gaattaatactgtgtaatatgttcaatgatctccaacccgcggaaattgcggctctgctt
tctggtctagtatttcaaggaaaaatccaaggagaaccggtgattccggagaagttgaaa
aaatgtgttaaggaattcgaggatatcaacgatacaattttagccgaagaactgcgccat
caaacaatagtagaatcagataatcgcctcaactttggattacttgaagttgtgtacgaa
tgggcccgaaataagccatttgctgaaataatgaaattaactgaagtgcaagaaggtata
atcgtgcgttgcatacaacaattggatgaaactctacgtgacgttaaaacagctgccatt
cgtattggcaatccaacattgcagagcaaaatggaagaagcatcaaccgccattaaacga
gacatagtcttcaccgcaagtttgtacaccgcattatga
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