Anastrepha ludens (Mexican fruit fly): 128855052
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Entry
128855052 CDS
T10909
Name
(RefSeq) cytotoxic granule associated RNA binding protein TIA1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
alud Anastrepha ludens (Mexican fruit fly)
Brite
KEGG Orthology (KO) [BR:
alud00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
alud03019
]
128855052
03041 Spliceosome [BR:
alud03041
]
128855052
Messenger RNA biogenesis [BR:
alud03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
128855052
Spliceosome [BR:
alud03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
128855052
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_3
RRM_7
RRM_5
Motif
Other DBs
NCBI-GeneID:
128855052
NCBI-ProteinID:
XP_053945615
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All DBs
Position
2:136947916..137142110
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AA seq
401 aa
AA seq
DB search
MVCNNSSFICLRLASSADHHQRSYIQHQHQHQHQQHSSPTCDRCTVQERLPTQLLFIEQF
HIFVGDLSSEIETQQLREAFTPFGEISDCRVVRDPQTLKSKGYGFVSFVKKSEAESAITA
MNGQWLGSRSIRTNWATRKPPASKENIKPLTFDEVYIQSSPSNCTVYVGGVNSALTALSE
EILQKTFSPYGSIQEIRVFKDKGYAFVRFSTKEAATHAIVGVHNTEINAQPVKCSWGKES
GDPNNAQTIASQALNPAAAAAAGFPYSVGAAAAAAAAYGQQLAATGCWYSPTPTYSASST
TAAVTPAAAASAAAVQNQFLQGIQGYHFGQYGGYQQGYMGMGVQIPATWQGVATQAQISP
AQQLATGVPGAAIPQAAGVVAYPIQQFQVSPQVYPLLLQAQ
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atggtatgcaataactcttcattcatttgcttgcgcttggcctcttctgctgaccaccat
cagcgttcttatattcagcatcagcatcagcatcagcatcagcaacattcatcgccaaca
tgcgatcgttgcaccgtccaggagcggctgccaacacaacttctgttcatcgaacaattt
catatttttgtgggcgatttgagctcagaaatcgagacccaacaattacgcgaagctttt
acgccatttggtgaaatttctgattgtcgcgttgtacgcgatccacaaacattaaaatca
aagggttatggatttgtgtcatttgtcaaaaaatcggaggctgaaagcgccatcacagct
atgaatggacaatggctcggctcgcgttcgattcgaacgaattgggccacacgaaaaccg
ccagcgagtaaagagaacatcaaaccattgacattcgacgaggtctacattcaaagcagc
ccctcaaattgcaccgtttatgtgggtggtgtcaacagcgccttaactgcgctcagcgag
gaaatcctacagaagaccttttcgccatacggttcgatacaagagatacgcgtctttaag
gataagggctacgcatttgtgcgcttttcaaccaaggaagccgccacacatgccattgtc
ggcgtacacaatacggaaatcaatgcgcaacctgttaagtgttcgtggggcaaggagagc
ggtgatccgaataatgcacagacaatcgccagtcaggcgcttaatcccgcagcagctgct
gcagccggtttcccgtacagtgttggggcagccgcagctgctgcagccgcctatgggcaa
cagctggccgccaccggttgctggtattcaccaacgccaacgtattccgcttcgtcgacc
acagcggccgtaacaccggctgctgccgcctccgcagccgcggtgcagaatcaattcttg
caaggcattcagggatatcacttcggacagtatggtggctatcagcaaggatatatgggc
atgggcgtacaaatacccgccacttggcaaggcgttgctacccaagcgcaaatatctccc
gctcaacagttggcgacgggcgtgcctggtgctgccataccgcaagctgccggcgtggtc
gcctatccgattcagcaatttcaagtgagcccacaggtttatcctttacttttgcaggca
cagtaa
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