Anastrepha ludens (Mexican fruit fly): 128855767
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Entry
128855767 CDS
T10909
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
alud Anastrepha ludens (Mexican fruit fly)
Pathway
alud03020
RNA polymerase
alud03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
alud00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
128855767
09124 Replication and repair
03420 Nucleotide excision repair
128855767
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
alud03021
]
128855767
03400 DNA repair and recombination proteins [BR:
alud03400
]
128855767
Enzymes [BR:
alud01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
128855767
Transcription machinery [BR:
alud03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
128855767
DNA repair and recombination proteins [BR:
alud03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
128855767
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
DUF5817
Motif
Other DBs
NCBI-GeneID:
128855767
NCBI-ProteinID:
XP_053946911
LinkDB
All DBs
Position
2:complement(164643693..164647967)
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AA seq
1176 aa
AA seq
DB search
MMYEDDEMYEEENAEEISHELWQEACWIVINAYFDEKGLVRQQLDSFDEFIQMSVQRIVE
DSPAIDLQAEAQHTSGEIETPPRFLLKFEQIYLSKPTHWEKDGSPSPMMPNEARLRNLTY
SAPLYVDITKTKIVEGADPVETQHQKTFIGKIPIMLRSTYCLLSQLTDRDLTELNECPLD
PGGYFIINGSEKVLIAQEKMATNTVYVFSMKDGKYAYKSEIRSCLEHSSRPTSTLWVNMM
ARGSQNIKKSAIGQRIIAILPYIKQEIPIMIVFRALGFVADRDILEHIIYDFDDPEMMEM
VKPSLDEAFVVQEQNVALNFIGARGARPGVTKDKRIKYAKEILQKEMLPHVGVSDFCETK
KAYFLGYMVHRLLLASLGRRELDDRDHYGNKRLDLAGPLLAFLFRGLFKNLMKEVRMYTQ
KFIDRGKDFNLELAIKTNIITDGLRYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTLS
HLRRVNSPIGRDGKLAKPRQLHNTLWGMLCPAETPEGAAVGLVKNLALMAYISVGSQPSP
ILEFLEEWSMENLEEIAPSAIADATKIFVNGCWVGIHRDPEQLMATLRKLRRQMDIIVSE
VSMIRDIRDREIRIYTDAGRICRPLLIVENGSLLLKKTHVDMLKERDYNNYSWQVLVASG
VVEYIDTLEEETVMIAMSPYDLKQDKDYAYCTTYTHCEIHPAMILGVCASIIPFPDHNQS
PRNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPMKPLVTTRSMEYLRFRELPAGINSI
VAILCYTGYNQEDSVILNASAVERGFFRSVFYRSYKDSENKRIGDQEENFEKPNRQTCQG
MRNAHYDKLDDDGIIAPGIRVSGDDVVIGKTITLPENDDELDGTTKRFTKRDASTFLRNS
ETGIVDQVMLTLNSEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMAFTCE
GLAPDIIINPHAIPSRMTIGHLIECLQGKLGSNKGEIGDATPFNDAVNVQKISTFLQEYG
YHLRGNEVMYNGHTGRKINAQVFLGPTYYQRLKHMVDDKIHSRARGPVQILVRQPMEGRA
RDGGLRFGEMERDCQISHGAAQFLRERLFEVSDPYRVHICNFCGLIAIANLRNNTFECKG
CKNKTQISQVRLPYAAKLLFQELMSMNIAPRLMVVQ
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atgatgtacgaagatgatgaaatgtacgaggaagaaaatgcggaggaaatctcccatgag
ttgtggcaggaagcttgctggattgttattaacgcatatttcgacgaaaagggtttggtg
cgtcagcaattggacagttttgacgaatttatacaaatgtccgtccagcgtattgtagaa
gactcgccagcaattgatttgcaagccgaagcgcaacacacttctggtgaaatcgagaca
cctccgcgttttctactcaaattcgagcaaatttacctatccaagcccacacattgggaa
aaggatggttctccaagccctatgatgccgaacgaagcacgtttgcgcaaccttacatac
tcggcaccactctatgtggacattacaaaaactaaaatagtcgaaggggccgacccagtg
gagacacaacatcagaaaacgttcattggcaaaattcccattatgttgcgttccacatac
tgtctgctctcacagctcacggatcgtgatttgacagagttaaatgaatgcccgctagat
ccaggcggttatttcatcattaacggttcggaaaaagtgctgattgctcaagagaaaatg
gccaccaatactgtctatgtattcagcatgaaagatggaaaatatgcatacaaatcggaa
attcgttcgtgtctcgaacacagctccagaccgacgtccacgttgtgggttaatatgatg
gcgcgtggttcacaaaatatcaaaaaatcggccattggtcaacgcataatcgccatttta
ccgtacatcaaacaagaaattccaattatgattgttttccgtgctttgggtttcgtagca
gatcgtgacattttggaacacatcatatatgactttgatgatcccgaaatgatggaaatg
gtaaaaccatcacttgacgaagccttcgttgtgcaagaacagaatgtggcgctcaatttt
attggcgcgcgcggtgcacgaccaggtgtaacaaaagataaacgtattaaatacgcaaag
gaaattttacaaaaagaaatgttgccacatgtaggcgtgtccgatttctgtgaaaccaag
aaagcatactttttgggctatatggtgcatcgactgctcttggcgtctttaggacgacgc
gagttggatgatcgtgatcactacggtaacaagcgtttggatctagccggtccgctattg
gccttcctcttccgtgggctattcaaaaatttgatgaaagaggtgcgcatgtacacacag
aaattcatcgatcgtggaaaggacttcaacttggagttggccatcaaaacgaatatcatt
actgatggtttgcgttactctttggccactggcaactggggtgatcagaagaaggcacat
caggcccgtgctggcgtctctcaggtgttaaatcgcctcactttcgcttcgacgttgtca
catttacggcgtgtcaattcaccaattggacgtgatggtaaactggccaaaccacgtcag
ctacacaatactttgtggggcatgttatgtcctgccgagacaccggaaggtgccgctgtc
ggtctggtaaagaatttggcgcttatggcgtacatttctgttggttcgcagccttcgccc
attctagagttcttggaggaatggtctatggaaaatttggaggaaatcgcaccctctgcc
atcgccgatgcaacgaaaattttcgtcaacggttgttgggttggcatacatcgtgacccc
gaacaattgatggcaactctgcgcaaattgcgtcgtcaaatggatatcatcgtctcggaa
gtgtcaatgattcgcgatattcgtgatcgtgaaataagaatttacacagatgcgggacgc
atttgtcgtccgctgttgattgtagaaaatggttcgctactgcttaagaagacgcatgtg
gacatgttaaaggaacgtgattacaataattatagttggcaagttttggtcgcttcgggt
gtggtggagtatatcgatacactggaagaggagactgtgatgattgccatgtcgccatac
gatttgaaacaggataaagattatgcctattgtacgacttacacgcattgcgaaatccat
ccggctatgattctaggtgtatgcgcatctattattccattccccgatcacaaccagagt
ccacgtaacacctatcaaagcgctatgggtaaacaagctatgggtgtttacatcactaac
ttccacgtgcggatggacactttggcgcacgtactctactatcccatgaagcctttggtc
actacacgttccatggagtatctacgtttcagagagttgccagctggcattaattcaata
gtagccattttgtgttacactggttacaatcaggaagattctgtcatcttgaatgcctca
gctgtggagcgtggcttcttccgttccgttttctaccgttcatataaagattctgaaaac
aagcgcattggcgatcaggaagaaaactttgaaaagccaaatcgtcaaacttgccaaggc
atgcgtaatgctcactatgacaagttggatgacgatggtattatcgcccctggtattcgt
gtgtccggtgatgatgtggtcataggtaaaacgattactttgcccgaaaatgatgacgag
ctcgatggcactacaaaacgcttcactaagcgagatgcttccacttttctacgtaattcc
gaaactggtattgtggatcaggttatgttaacgctaaatagtgagggctataagttctgt
aagattcgtgtgcgttcagtgcgcataccacaaattggtgacaagtttgcctcacgtcac
gggcagaagggtacttgcggtatccaatatcgccaggaagacatggcgtttacatgtgag
ggactggcccccgatattataattaaccctcacgccattccatctcgtatgaccattggc
catttaatcgaatgtctgcaaggaaaattgggctcaaacaaaggcgaaatcggtgacgct
acacccttcaacgatgctgtcaacgtacaaaaaatctccactttcctgcaagagtatggc
tatcatctccgcggcaacgaagtgatgtacaacggccatacaggtcgcaaaatcaatgcc
caagtatttttagggcctacctattatcaacgtctcaagcacatggtggatgataaaatt
cactcccgtgctcgcggtcccgtacagattttggtgcgccaacctatggagggtagggcg
cgtgatggtggtctacgtttcggtgagatggaacgtgattgtcagatatcgcacggtgcc
gcgcaattcctgcgcgaacgtctcttcgaagtctccgatccttatcgcgtgcacatttgc
aatttctgcggtctcatcgctattgctaatttgcgcaataatacttttgagtgcaaaggt
tgcaaaaataaaacacaaatatcgcaagtccgcttgccgtacgccgccaagctgttattc
caggaacttatgtcgatgaatattgcaccgcgtctcatggttgtccaatag
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