Anastrepha ludens (Mexican fruit fly): 128855865
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Entry
128855865 CDS
T10909
Name
(RefSeq) endoribonuclease Dcr-1
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
alud Anastrepha ludens (Mexican fruit fly)
Brite
Chromosome and associated proteins [BR:
alud03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
128855865
microRNA pathway
RISC loading complex
128855865
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GFIT
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NCBI-GeneID:
128855865
NCBI-ProteinID:
XP_053947052
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Position
2:173024616..173041404
Genome browser
AA seq
2343 aa
AA seq
DB search
METTKRTNRPLHRQMFLNSNCVVFYATKMSFHWCDNIHTTIFTPRDYQIELLSAAFERNV
MICLGHKSSKEFIALKLLQELARPARIAEKINLYLTCEQNAPSITTMIEHLTDLKVYKEE
RTGATDKQEIHIPKDFQLYVLHPRTCLAALRCGNLSMTNVHLLILEDCHEAEVYRDLRQI
FQYHFNVSGKDMPKVLGLAGPLHSAECSLEELSAMLNTLEDSVHCKAETASDIVTVLRYC
AKPSEYIVQCTPYPRDELTAVLEEVICTRKAFLIDHRYDPFEIYCTEEYMEELKDIPDPK
EEPMEFLEIMLFVLYEMGPWCADRVAVNMFHRIEKQKIKTPHERHYILLCVVNTALLEFH
AICEQTFKKFNNHKELVERYSSPKVFRLLEILRLFKPEELLTKNETIQKMSQDLDQMDFQ
KLSRSIEYSCQNVENVTTKLQLESRSIMDNLDPIVKSPTTDVAKQQTLQANTTHKTESSA
STNRRHGVGGSHGRFKRRPFSRRQMRDNGDALDTLCAIIFCNSNYTARVLFDLLSEMSRH
DPELKFLKCQFTTDRVADPITEPKEAEVEHRRQEEVLKRFRMHDCNVLIGTSVLEEGIDL
PKCNLVVRWDAPTTYRSYVQCKGRARAAPAYHVILVSPAYNAILCENEQLSDQSHRYLCK
LEVGQDDVIDTDSCSDDEEECNDKSNKFTIGSSKGIVKILNPEVITSKPPTKCEITLKEI
KDELPAIKGIENEDTNTIDLVEIESELAPITERQNETSSIKEVKTKSVANESLHDCFDVL
DLSDMISDMSSNNSSRILLEETATTPASASVTPKQKKEKRRFRCICENENCAQHGSETGL
DATINQIELTTNKIVEQLAEYREIEKMLLQKCANTEPSEAEHQLADYFNKCVKRYKPCEH
LLTGASVDLTSSIALVNKYCSKLPSDTFTKLTALWRCTKTIRCGVEMYQYTIRLPINSPL
KYDIVGLPMSSNILARRMAALQACIELHKTGELDDNLLPIGKEGFRAMEPDWENFDLEEE
DDKIVLENSEPRPGTTKRRQYYYKRIASEFSDCRPTAGVPCYLYLIDLTLQCPIPEEQNT
RGRKIYPPEDAQQGFGILTLKRIPKVSSFPIFTRSGEVKVSIVLAKERVVLTETQIRCIN
TFLNYTFTNVLRLQKFLMLFDPDSTENCVFIVPTVKRDGGKVIDWDFLELIERNASMMPT
PVPEDMRKSIDFDANKFKDAVVMPWYRNQDQPQYFYVAEICPQLSPQSCFPGENYRTFKH
YYFLKYGLTIQNVKQPLLDVDHTSARLNFLTPRYVNRKGVALPTSSEETKRAKRENLEQK
QILVPELCTVHPFPASLWRTAVCLPCILYRINGLLLADDIRKKVSLDIGLGQQEIPDDFE
WPMLDFGWSLSEVLKRSKENNASSDKKTEEQKEKEANNKQSNGFAKDIGVNGEFCAEDNQ
TKAKSANEIIIEGEKKLKDSNFIEIGTWSNDMANDINFNKYSDSLDDDEEECLKYFPSNV
SFCDQQMRYGSPTFWDVKESQLNKKPDDCAQSKNTIDTNNFRKNSFAYYDSDDSFASSYD
GNEPTNYSEDEDDECGPLRIAFTSRNEAETIETDQEIEKRNKKLSIIQATNANERNYQKT
KNLLVGYNFEDLKPNIEAELCDSIAKFTASTRLLKANIEQSGMLVKYNQPVMLARKERTT
NESAAQSEAATTEAFLKLLPYADKDVLMSILSKQANVLTIADIARLNADYLKSHPLELFE
IQGCGDIFDNFNDKGMLKLEGWGEGYKKLIKLNFERKAGATGCVSLIDVKQESKNVQGNT
FSFDRQPDLAGHPGPSPSIILQGLTMSNANDGINLERLETIGDSFLKYAITTYLYITYEN
VHEGKLSHLRSKQVANLNLYRLGRRKKLGEYMIATKFEPHDNWLPPCYYVPKELEKELIE
AKIPPHHWKLVDLANIKKLNSAEICALVREKADKLGLFGDEYNCSEDASAVDEIAEGNDF
SCFIPYNLVTQHSIPDKSVADCVEALIGAYLIECGPRGALLFMAWLGIRVLPFVRKPYNP
QEPRIPGSSNPDVNGEITVYGEWTAPKSPLLHYSPNAPQELESMLEGFDEFENTLGYKFR
DRSYLLQAMTHASYSPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHSPGALTDLRSA
LVNNTIFASLAVRHGFHKYFRHLSPGLNEVIDRFVRIQNENGHSISEEYYLLSEEECDDA
EDVEVPKALGDVFESIAGAIFLDSNMSLDVVWQVYSNMMKPEIEQFSNSVPKSPIRELLE
LEPETAKFGKPEKLADGRRVRVTVDVFCKGTFRGIGRNYRIAKCTAAKCALRQLKKQGLI
KKD
NT seq
7032 nt
NT seq
+upstream
nt +downstream
nt
atggaaacaacaaagcgtacaaaccgccctcttcaccggcaaatgtttttaaattcaaat
tgtgttgtgttttatgccaccaaaatgtcgttccactggtgtgataacattcacaccaca
atttttacccctcgtgattatcaaatcgaattgctatctgccgcgttcgagcgtaatgta
atgatatgcctcggtcacaaatcatccaaggagtttattgccttaaagctcctacaggag
ctggcacgaccagcacgaattgcggaaaagattaatttatacctgacttgtgaacaaaac
gctccatctataacaaccatgatagagcacttgactgacttgaaagtgtacaaagaggag
agaacgggggcgacggataagcaggaaattcatataccaaaagactttcaactttacgta
cttcatccacgtacttgtctggcagccttgagatgtggaaacctaagtatgacgaatgtg
catttgttaatactggaagactgtcatgaagcggaggtgtatagagacttgcgtcaaatc
tttcaataccatttcaatgtttccggcaaagacatgccgaaagtgttgggcttagctgga
ccacttcacagcgctgaatgctcgctagaagagctcagtgcaatgctgaatactttggag
gatagtgtgcactgcaaagcagagactgccagtgatatcgtaacagtattaaggtattgc
gccaaacctagtgagtatatagtgcaatgcacgccatatccgcgagatgagctgaccgct
gtactagaggaggtaatttgcacgagaaaagcgtttttaatagatcaccgttacgaccct
ttcgaaatatactgtacagaagaatatatggaggaattaaaggatattcccgatccgaaa
gaagaacccatggaatttttggaaatcatgctctttgtgctctacgaaatgggcccgtgg
tgtgcagatcgtgttgctgtcaacatgtttcaccgcatagagaaacagaaaataaaaacg
ccacatgaacgccattacattttgctttgcgttgtgaatacagcgcttctagaatttcat
gctatttgcgaacaaacattcaaaaaatttaataatcataaagaattagtggaacgctat
tcgagccctaaagtttttcgtttgctggaaattttacgcttattcaagccggaagaatta
ttgaccaaaaacgaaactattcagaaaatgagtcaggatttggatcagatggattttcaa
aaactcagccgaagtatcgaatatagttgccagaatgtggaaaatgtgactacaaaacta
caactcgaatcacgctcgattatggataatttagatccaattgtaaaatcgcccacaact
gatgtggcaaaacagcagacattgcaagcgaacacaacgcacaaaacggaaagttccgcc
agtacaaaccgacgccatggtgtcggtggttcacatggccgtttcaaacggcgacctttt
agccgccgacaaatgcgtgacaacggtgatgccttggatacgctctgcgctattattttc
tgcaactccaattacacggcacgtgtgctttttgatttactgagcgaaatgagccgccac
gatccggaactgaaattccttaaatgtcagttcacaactgaccgtgtcgctgatcctata
accgaacccaaggaagctgaggtcgagcataggcgtcaggaagaggtattgaaacggttt
cgtatgcacgactgcaatgtcttaattggcacctcagtgctagaggagggcattgatttg
ccaaagtgtaatttagtagtgcgctgggatgcacctacaacatatcgtagctatgtgcaa
tgtaaagggcgtgcgcgagcagcacctgcttaccatgtgatactagtatcgccagcttat
aatgcaattctttgtgaaaacgaacagttaagtgaccagagccataggtatttatgtaaa
ttagaggttggccaggacgacgttatcgatacggattcatgtagcgatgatgaggaggaa
tgcaatgacaagagtaacaaatttacaatcggttcttcaaagggaatcgtaaaaatatta
aatcccgaagtgattaccagtaagccaccaacaaaatgcgagattacgctcaaggaaatc
aaggacgaattgccggccattaaaggcatagaaaatgaagatactaataccattgattta
gtagaaattgaaagcgagttggctcctattacggaacggcaaaatgaaacatcttcaata
aaggaagttaaaacgaagtcagtggccaacgagtcgctacatgattgtttcgatgtgctc
gatcttagcgacatgatttcagacatgagcagtaataactcttctagaattttattggaa
gaaacagcaacaacaccggcttcagcatcagttacaccaaagcaaaaaaaggagaagcgt
cggtttcgctgtatctgtgaaaatgaaaactgtgcacaacacggttcggaaaccggcctc
gatgctactatcaaccaaatagaactcacaactaataaaatagtggagcaattggcagag
tatcgggaaatagagaagatgctcctacaaaaatgcgctaatactgagccatcggaagca
gaacaccaactggcggactatttcaacaaatgcgtgaagcgttacaaaccctgtgaacat
ctgctgacaggtgcttctgtggatctcacttcatccatcgcgttagtcaacaaatactgc
tccaagttgccaagcgacacatttacaaaactcactgcgctctggcgttgcacaaaaacc
attcgatgtggtgtcgaaatgtaccaatacacaatacgtcttccgataaattcgccatta
aaatatgatatagttgggcttccaatgtcttcgaatatattggcgcgtagaatggccgct
ttgcaagcatgcatagagctgcataaaactggcgagctggacgacaacctgctgccaata
ggaaaagagggattccgtgctatggaacccgattgggagaactttgacttggaggaagaa
gatgacaagatcgtacttgaaaactctgagccgcgtccaggcactacaaaacgcagacag
tattactataagcgaattgcctcggagtttagtgattgccgcccgacagccggtgttcct
tgctatctgtatttaatcgacttgactctccagtgccctattccagaggagcaaaataca
cgtggccgtaaaatatacccgcctgaagacgcgcaacaaggttttggtatacttacctta
aagcgtataccaaaagtcagttcatttcctatatttacacgttccggcgaggtaaaagta
tccattgtgctcgctaaagagcgggtggtgctcaccgaaacacaaatacgctgcatcaat
acattcctcaattatacattcacaaacgtattgcgtctgcagaagttccttatgctcttt
gatcctgactccacggaaaattgtgtattcatagtgccgacagtgaagcgagatggcggc
aaggtgatcgactgggacttccttgagttaattgaacgaaatgcaagtatgatgccaact
ccagtgccagaagacatgcgcaaatccatagattttgatgctaacaagttcaaggatgcc
gtcgttatgccttggtatcgcaatcaagatcagccgcaatacttttacgtggccgagatt
tgtccgcagttatcaccgcaaagttgttttcctggcgaaaactaccgcacatttaagcat
tactatttccttaaatacggcttaaccatacagaatgtgaaacagccactgttggatgtg
gatcacacaagtgcgcgtttgaattttctaacgccgcgttatgtaaatcgaaaaggagtt
gccttgccaaccagctcggaagaaacgaaacgtgccaaacgtgagaacctcgaacaaaag
caaattcttgtgcctgaactgtgcaccgtacatccatttccggcctcactgtggcgcact
gctgtttgcttgccctgcattctgtaccgcataaacggattgctgttagctgatgacata
cgcaagaaggtgtcgttggatatagggttgggacagcaagaaattcccgacgactttgag
tggccaatgctggactttggctggagtttgtcggaggtgctaaagcgatcaaaagaaaat
aatgcgtcgtcggacaagaaaacggaagaacaaaaggaaaaggaggcaaataacaaacaa
agtaacggttttgcgaaagatattggcgtcaatggtgaattttgcgcagaagataatcaa
actaaagcaaagagcgcaaacgaaattattatagaaggcgaaaagaagttgaaggatagt
aattttatagaaataggcacctggtccaacgacatggcgaatgatatcaattttaataag
tactcggactcattagacgacgatgaggaggaatgtttgaaatattttccatcgaatgtc
agtttttgcgaccagcagatgcgttatggctcgcccacgttctgggatgttaaggaatcc
caactaaataaaaaaccggacgattgcgcgcaaagcaaaaacaccatcgatacgaacaat
tttcgcaaaaattcatttgcctattacgactccgacgactcattcgcatccagttacgat
ggtaatgagccaaccaactatagtgaggatgaagatgatgagtgtggtcctttgcgtata
gccttcacctctagaaatgaggctgaaaccatcgaaaccgatcaggagatcgaaaagcgc
aataaaaaactgtccatcattcaagcgaccaatgcaaatgagcgcaattatcagaaaacc
aaaaacctgcttgtgggctataactttgaggacttaaaaccgaatatagaagcagaattg
tgcgactccattgccaagttcactgcatctacacgcctactgaaagcgaacattgaacag
tccggtatgcttgtgaaatacaaccagccagtgatgttggcacgtaaagagcggaccaca
aacgagtcggctgcacagagcgaggcggcaactactgaagcgtttttgaaacttttgccc
tatgctgataaagatgtgctaatgtctattttgagcaagcaggcaaatgtgctgaccatt
gcagatattgcgcgtttaaatgctgactatttgaaatcgcatccattggagctattcgaa
attcaaggttgtggtgatatttttgataatttcaatgataagggcatgttgaagttggag
ggatggggcgaaggatataagaagttgattaagttgaattttgagagaaaagcaggtgca
acaggctgcgttagcttaatagatgtgaaacaggagagtaaaaacgtgcaaggcaatacg
tttagcttcgaccgccaaccggatttggctggccacccaggacctagcccaagcatcatt
ctgcaaggtttaacaatgtcgaatgccaatgatggcatcaatttagaacgtctggagacg
attggcgactcatttctgaaatatgcgattaccacatatttgtatataacatacgaaaac
gtgcacgaaggcaagctaagtcatttgagatcgaaacaagtggccaacttgaatctatat
cgactagggcgccggaaaaagctgggcgaatatatgatagcgacgaaattcgaaccacac
gacaattggttgccgccctgctactatgtgcccaaagagctcgagaaggaactgatcgag
gcaaagataccgccacatcactggaagctggttgatttggctaacattaaaaagttgaac
agcgccgagatatgcgcattggtgcgtgaaaaggcggacaaattgggactcttcggtgat
gaatacaattgcagcgaggatgctagcgctgtcgatgaaatcgctgaaggcaatgacttt
tcctgctttattccttacaatcttgtgactcaacacagcattccagataaatcggttgcc
gattgtgttgaagcgttaatcggcgcatatctcatcgaatgcggtccgcgtggcgctctg
ttgtttatggcgtggcttggcatacgtgtgctgccgttcgtgcgcaaaccatataatcca
caagagccccgtataccgggcagctctaatccggatgtgaatggtgaaataactgtatat
ggcgagtggacagcgccaaaaagtccactgctccactattcgccgaacgccccacaggag
ctggagtctatgttggagggtttcgatgagtttgaaaatacattgggttataaatttcgt
gatcgttcctatctactgcaagccatgacccatgccagctactcgccaaatcgtttgaca
gattgctaccaacgcttagagtttctgggtgatgctgtgttggattatctaattactcgt
cacctttacgaagatcccaggcagcactcgccgggtgcattgaccgacttgcgctcggcg
ttagtaaataatactatatttgcgtcactggctgtgcgacatggtttccacaaatatttt
cgacatctatcgccgggtttaaatgaagtcatcgatcgttttgtacgcatacagaacgaa
aatggtcatagcataagcgaagaatattatctactctcggaggaagagtgcgacgatgct
gaagatgttgaagtgccaaaagcgttgggtgatgtgttcgagtcaatagcaggcgccatc
ttcctggactccaatatgtctttggacgttgtatggcaggtgtatagtaatatgatgaag
ccagagatagaacaatttagcaactcagtgccaaaatcccctattagagaattgctggaa
ctggaaccggagaccgccaaatttggaaaaccggagaaactggctgatgggcgtcgggtg
cgcgtcaccgttgatgtcttctgcaaaggcacattccgtggtattggccgtaactatcgt
atagcgaaatgcacggcagctaaatgcgcattacgtcaattaaagaagcaaggtttgata
aagaaggactaa
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integrated database retrieval system
