Anastrepha ludens (Mexican fruit fly): 128856891
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Entry
128856891 CDS
T10909
Name
(RefSeq) regulator of nonsense transcripts 1 homolog
KO
K14326
regulator of nonsense transcripts 1 [EC:
5.6.2.5
5.6.2.3
]
Organism
alud Anastrepha ludens (Mexican fruit fly)
Pathway
alud03013
Nucleocytoplasmic transport
alud03015
mRNA surveillance pathway
Brite
Enzymes [BR:
alud01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
128856891
5.6.2.5 RNA 5'-3' helicase
128856891
Messenger RNA biogenesis [BR:
alud03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
128856891
mRNA cycle factors
Common to processing body (P body) and stress granule
128856891
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GFIT
Other DBs
NCBI-GeneID:
128856891
NCBI-ProteinID:
XP_053948289
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Position
3:complement(5360080..5365931)
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AA seq
1213 aa
AA seq
DB search
MSVDAYGPGSQTLTFLDTEENDLIGADTQASDFDFRDFTLPSQSQTQASQLEGISGGGTT
HSKLNALANNLAELQFEEEDDDTSLAVKELPTHACKYCGIHDPGTVVMCNNCKKWFCNGR
GSTSGSHIVNHLVRAKHREVTLHSEGPLGETILECYSCGVRNVFVLGFIPAKADSVVVLL
CRQPCAAQNSLKDMNWDQEQWKPLITDRSFLPWLVKIPTEQEQLRARQISAAQINKLEEL
WKENIDATFQDLEKPGIDTEPSQVLLRYEDGYQYEKVFGPLVRLEAEYDKKLKESQTQEG
IEVRWDVGLNKKTIAYFTLAKTDSDMKLMHGDELRLRYVGELHKPWSEIGHVIKVPDNYG
EDVGLELKCSAGAPVKCTSNFAVDFIWKCTSFDRMTRALKVFAMDRSSVSNYIYARLLGH
GRHDGSDELLFRGPIPKLFSAPNLPDLNRSQVYAVKHALQRPLSLIQGPPGTGKTVTSAT
IVYQLVKQHGGTVLVCAPSNTAVDQLTEKIHRTNLKVVRLCAKSREAIDSPVSFLALHNQ
IRNMDTNIELKKLQQLKDETGELSSADEKRYRTLKRAAEHQLLEAADVICCTCVSAGDVR
LARIKFTSILIDESMQSTEPECMVPVVLGAKQLILVGDHCQLGPVVMCKKAARAGLSQSL
FERLVVLGIRPFRLEVQYRMHPELSQFPSNFFYEGSLQNGVCAEDRKLKIDFPWPQPDRP
MFFLVTQGQEEIAGSGTSYLNRTEAANVEKITTRFLKAGVKPEQIGIITPYEGQRAYLVQ
YMQYQGSLHSRLYQEIEIASVDAFQGREKDIIIMSCVRSNERQGIGFLNDPRRLNVALTR
SKYGTIIVGNPKVLSKQPLWNHLLNFYKDRKVLVEGSLNNLKESLIQFQKPKKIVNTLNM
GAHFMTTMMADAKEAMIPGSIYDRSGQYGYSSGAMNTSNYNNSGLGLGLGFGGSNNLGYG
GGSAAAQMQAAAAAAAHNLNNFMSGNFGAIGARNSGPTSTAAPANAHQWNHHHDSISYIS
PERAQAAMNNMPVPVGMFMNMSNIPPRFYNQHQQAIQAAAKQGRRTGTGLGATGLVSNNS
SSGISKLFNNYNASTNEVANKIQNLKPRTSIPAPPSTTSVTTSANDIASVLIGTGATSSQ
HNVLPLTQQNMSQQMSQPGGFTLSQQPELSQDFGQISQIDNILSQDVNFNADNLNTNRLN
LGLNSQSQFSQPY
NT seq
3642 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtggatgcctacggccctggttcgcagactttgacgttcctggacacggaggaa
aatgacttgattggcgccgatacgcaggcatcggattttgattttcgtgattttacgctg
ccttcgcaatcccaaacgcaggcatctcaacttgagggtattagtggcggcggaacaaca
catagtaaattaaatgccctggcaaataatttggctgagctgcaatttgaggaagaggat
gatgatacatcattagccgtaaaagaattgcctacgcatgcttgcaagtattgtggcatt
cacgaccctggtactgttgtcatgtgcaataactgcaaaaaatggttttgtaatggacgt
ggtagtacatccgggtcgcatattgttaatcaccttgtgcgtgctaaacatcgtgaggtt
acgcttcattctgagggccctcttggagaaactattctggagtgttattcttgtggtgtt
cgtaatgtctttgtattaggatttattccggcaaaagctgattctgtagtggtgttgttg
tgtcgccaaccatgcgcggctcaaaattctttgaaagatatgaattgggatcaggaacaa
tggaaaccgcttataactgatcgttcattcttgccatggttggtgaagatacccaccgaa
caagaacaattgcgtgcgcgccaaatatcggcagctcagataaacaaactggaggagttg
tggaaagagaatattgatgcgacatttcaagacttagaaaaacctggtatcgacacggag
ccctcacaagtacttttacgatacgaagatggttatcaatatgaaaaagtgtttggtcct
ttggtgcggcttgaagcggaatacgataaaaaattgaaagaatcgcaaacacaggaaggt
atagaagtgcgttgggacgttggcctcaacaaaaaaaccatagcatattttacgctggct
aaaaccgattcggacatgaaacttatgcatggtgatgaattaagactgcgctacgtggga
gagcttcataaaccatggagtgaaattggtcacgttattaaagtgcctgataattacggc
gaagatgtggggctggaactaaaatgctcagcgggagcgccagtcaaatgtacttccaac
tttgccgtggattttatttggaagtgcacttcttttgatcggatgacccgggcactaaaa
gttttcgctatggaccgcagctccgtctctaactacatatacgcaagacttctggggcat
ggtcgacacgatggcagcgatgaactattatttcgaggtccaataccaaaactttttagt
gcgccgaatttgcctgacttaaatcgatcgcaggtttatgctgtaaaacatgctttgcaa
cgaccgttgagcttgattcaaggtccgccaggtaccggaaaaactgtaacctctgcaaca
atagtttatcaattggtgaagcaacatggcggcaccgtgcttgtatgcgcgcccagcaat
actgccgtagaccagctaacagaaaaaatccatcgcacgaacttgaaagtggtgcgtctt
tgcgccaagtctcgtgaagctatcgatagtcctgtgagcttcttagccttacataatcag
atccgtaatatggacacaaatattgagttgaaaaaattgcaacagctcaaagacgagact
ggtgaattaagttcggcagatgagaagcgatatcgcacattgaaacgcgccgctgagcat
caactgctcgaggctgctgatgttatttgctgcacatgtgttagcgccggtgacgttcgt
cttgcacgcataaaatttacttcaatcctgatagatgaatctatgcagtctaccgaacca
gagtgcatggtcccggtggtgttgggcgctaagcaattgattcttgtgggtgaccactgc
caattgggaccggtagtcatgtgcaaaaaggcagccagggctggtctttcgcaaagtttg
tttgaacgtctggtagtattaggtattcgcccttttcgcctcgaagttcagtatcgaatg
catccagaattgtcacaatttccttcgaacttcttttatgagggatcattgcagaacggt
gtttgcgctgaagatcgtaaattaaaaattgacttcccgtggccacaaccagataggcca
atgttcttccttgtgactcaaggacaagaagaaatcgcgggctcaggaacttcttatttg
aatcgaactgaagcggctaatgtagaaaaaataacaacacgattcctaaaagccggtgtt
aaaccagaacagattggcataattacgccgtacgaaggccagcgcgcgtacttagtacaa
tacatgcagtaccaaggcagtttgcactcaagattgtatcaggaaatcgagattgccagc
gtcgatgctttccaaggaagagaaaaagacattattattatgtcctgcgtacgttcaaac
gagcgccaaggtatcggcttccttaatgaccctcgtcggttgaacgttgcattaacgcgc
tcaaaatatggtacaatcattgtgggcaatcccaaggtgttgtccaagcagcccctttgg
aatcatttgcttaatttctacaaggatcgcaaagttttggtggaaggttcattaaataat
ttgaaagaatcgttaatacaattccaaaagcccaaaaaaattgtcaataccttgaatatg
ggtgcccactttatgaccacaatgatggccgatgctaaagaagccatgattcctggttcc
atttacgaccgttctggtcaatatggatattcatcgggcgctatgaatacgtcgaactat
aacaatagtggtctgggcctaggcttgggatttgggggcagcaacaatttaggttacggc
ggtggatcagcagcagcacaaatgcaagcggcggcagcagctgcagcacataatttgaac
aatttcatgagtggaaacttcggcgcgattggggcccgcaacagcggccctacttcaact
gcagcgcctgctaatgcacaccaatggaatcatcatcatgactcgatcagttacatttca
cctgagcgtgctcaagcagcaatgaacaacatgccagtgcctgtgggcatgtttatgaac
atgagcaatattccgccacgtttctacaatcaacatcagcaggcgattcaggcagcggca
aaacagggccgacgtaccggcactggtctgggtgctaccggactggttagtaacaacagc
agcagtggaataagcaaactatttaataactacaatgcatccaccaatgaggtggcaaat
aaaattcaaaatttaaaaccacgcaccagcataccagctcctccaagcacaacatcagta
acaacaagtgccaacgacattgctagtgtgctcattggaacaggtgcaacctcgtctcag
cataatgtcttgccgctcacccagcaaaatatgtcgcaacaaatgagccagcctggtggc
ttcacgttgtcacaacagcctgagctatcacaggactttggccaaatctcgcaaatagat
aatattctttcacaggacgtaaattttaacgcggacaatcttaacacgaatcggctaaac
ttgggcctgaatagccagagtcaattctcgcagccctattga
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