KEGG   Anastrepha ludens (Mexican fruit fly): 128856896
Entry
128856896         CDS       T10909                                 
Name
(RefSeq) cleavage stimulation factor subunit 1
  KO
K14406  cleavage stimulation factor subunit 1
Organism
alud  Anastrepha ludens (Mexican fruit fly)
Pathway
alud03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:alud00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    128856896
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:alud03019]
    128856896
Messenger RNA biogenesis [BR:alud03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage stimulation factor (CSTF) complex
     128856896
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_THOC3 WD40_Prp19 Beta-prop_WDR3_1st WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 WDR55 Beta-prop_WDR3_2nd CSTF1_dimer Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_1st EIF3I WD40_Gbeta Beta-prop_WDR36-Utp21_2nd ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR75_1st Beta-prop_EML Beta-prop_VPS8 WD40_RFWD3 Beta-prop_RIG_2nd NBCH_WD40 Beta-prop_SCAP Beta-prop_IFT140_1st WD40_MABP1-WDR62_1st Beta-prop_Aladin Beta-prop_TEP1_C WDR90_beta-prop_4th Beta-prop_IFT122_1st Beta-prop_WDR19_1st Beta-prop_Vps41 Ge1_WD40 Beta-prop_HPS5 Beta-prop_NUP159_NUP214 Beta-prop_DCAF4 Beta-prop_SPT8 WDR54 Beta-prop_WDR35_TULP_N Beta-prop_WDR75_2nd Beta-prop_NWD2_C PEP5_VPS11_N Beta-prop_EDC4L Beta-prop_LRRK2 VID27
Other DBs
NCBI-GeneID: 128856896
NCBI-ProteinID: XP_053948306
LinkDB
Position
2:25288700..25290453
AA seq 425 aa
MRDIEILDPRNLVKNREILYRLIISQLMYDGLEKFAMELSMLVKADECAPSERLLHVMIA
GMQATTEKSTTPKDDVLPGIDLEFEPEASALAPEPASYETAYVTSHKQSCRAGAFSHDGT
LVATGSVDASIKILDVDRMLAKSAPEDIEPGREQQGHPVIRTLYDHTDEVAYLEFHPKEH
ILASGSRDGTVKLFDIAKPSVKKAHKVFTDCEPVTCLSFHPTGDYMAIGTEHFVLRVYDV
HTSQCFVSAIPSQQHKGAVTCVKFAPTAKLYATGSLDGAIKIWDGVSGRCINTIPEAHAG
AEICSLEFTRNGKYLLSSGKDSLVYLWELCTSRPVQTYTGAGTTGKQEHNTQAVFNHTED
YVLFPDEATTSLCSWNSRNGARLNLMSLGHNGPVRFITHSPNSPAFLTCSDDFRARFWYR
RSTNQ
NT seq 1278 nt   +upstreamnt  +downstreamnt
atgcgcgacattgagattttagatccccgaaatttagtgaaaaatcgtgaaatactttac
aggcttattataagccagttgatgtacgatggcctggaaaagttcgctatggagctttct
atgctagtcaaagcagatgaatgtgctccaagtgaacgcttgttacatgtcatgatcgcc
ggtatgcaggcaactactgagaagtccaccacacctaaagatgatgtgttgcctggcatt
gatttggagttcgagcctgaagcatctgcacttgcgcccgaacccgcctcctatgaaact
gcttatgttacatcgcataagcagtcttgtcgcgctggtgcatttagccatgatggcaca
ttagttgcaacgggcagtgtagacgcaagtataaagattttggatgtcgatcggatgttg
gctaaatcggcaccagaagacatagaaccagggcgggaacagcaaggccatccggttata
cgtacactctatgatcacacagatgaggttgcttatctggaattccatccgaaagaacac
atattagcttctggttcgcgggatggcacagtaaaactcttcgatatagccaaaccttca
gtgaaaaaggcgcacaaggtgttcaccgattgtgaaccggtgacttgcttgtcatttcat
cctaccggtgattatatggccattggcaccgaacattttgtgctacgtgtttatgacgtg
cacacctctcaatgtttcgtaagtgcaataccatcacaacaacacaagggagcagtgaca
tgtgttaaattcgcaccaacagcaaaattatatgccacaggcagtttagatggtgccata
aaaatatgggatggggtcagtggacgttgcatcaataccataccggaagcacatgcaggt
gcagaaatttgttctctggaattcacaaggaatggaaaatatttactttcatctggaaaa
gactcgttggtctatttgtgggaactttgcaccagccgacccgtacaaacttacactggc
gccggtactactggcaaacaggaacacaatacgcaagcggtattcaatcacactgaagat
tatgtgctatttcctgatgaggcgactacttctctgtgttcttggaattcacgcaatggt
gcgcgtttgaatctgatgtccttgggccacaatggtccagtgcgttttataacgcattct
ccaaactcacctgcattcttaacatgttcagacgattttcgagcacgtttttggtatcgt
cgttcaacgaatcagtga

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