Anastrepha ludens (Mexican fruit fly): 128857984
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Entry
128857984 CDS
T10909
Name
(RefSeq) histone deacetylase 6 isoform X1
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
alud Anastrepha ludens (Mexican fruit fly)
Brite
KEGG Orthology (KO) [BR:
alud00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
alud01009
]
128857984
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
alud03019
]
128857984
04131 Membrane trafficking [BR:
alud04131
]
128857984
03036 Chromosome and associated proteins [BR:
alud03036
]
128857984
Enzymes [BR:
alud01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
128857984
Protein phosphatases and associated proteins [BR:
alud01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
128857984
Messenger RNA biogenesis [BR:
alud03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
128857984
Membrane trafficking [BR:
alud04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
128857984
Chromosome and associated proteins [BR:
alud03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
128857984
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
Motif
Other DBs
NCBI-GeneID:
128857984
NCBI-ProteinID:
XP_053949833
LinkDB
All DBs
Position
3:54799980..54815392
Genome browser
AA seq
1083 aa
AA seq
DB search
MSSPIVTRRGAQKAKIQTRAMVKSAVAASKPSAALVEAKRKAKLLKMQEQSQQDQVVKDI
FQNAVSAKTIIKKPTGIVYDESMAQHRCLWDENHPERPERFTRVLERCKELHLIEQCQRI
PSRRATKDEILLLHSVEHYDLLQRTSGVQDEASMEDLSSKFDSIYIHPSTFELSLLATGS
TIDLIENVIAGNVQNGMAIIRPPGHHAMKAEFNGYCFFNNVAIATQYAIDILKLSKIMIV
DWDIHHGQGTQRFFYNDPRVLYFSIHRFEHGTFWPYLKESDFDAIGNGNGTGYNFNVPLN
KTKMGNGDYLAIFQQLLIPVAVEYQPELIIISAGYDAALGCPEGEMEVTPAFYAHLLNSL
MKLAQSRVAVILEGGYCLDSLSEGAALTLRTLLGGTCPALVEKLEPPGEVIQDTILNCIY
AHRPYWRCLQIQPIYTMEELNNVNPQPKLHKVSRLFIGGEPLPERFPTRGTAPVMLPEVV
AQNEKRLKFLKHETKLLTPHVRVCYVYDDIMLQHSNTFEDGHPEQPARIKRIYEMHIDYK
LTERMKQLPPRIATTDEICLAHTRAHVNFIRRISDKDELQRMGEKYNSVYFHPKTFDCAT
LAAGSVLQVVDKVLSGEARSGVCIVRPPGHHAESDVPHGFCIFNNVAIAAQYALRDHGLK
RVLIVDWDVHHGNGTQHIFESQSNVLYISMHRYDNGTFFPKSKDADFDVVGKAAGVGFNV
NIPWNKKGMGDMEYVMAFQQLVMPIAYEFDPELVLVSAGFDAAIGDPLGGCKVTPEAYGL
FTHWLSGLAGGRIILCLEGGYNVNSISYSMTMCSKSLLGDPIPPIQVNGNTARNLSAAYT
SCVETIQNCLSVQQRYWKSLVFNKRLPQFASENNNEDFLSATMQNLAIKTDEERCVIGCE
NAADTEVALEPSGSKPKVKVKTLTEFLTENLEALQNNEMFAVVPLKTCPHLKQLRPEEAP
KIIDSNAPCENCLSTVENWMCLSCYQILCGRYVMEHMLLHSIATSHPFALSFSDLSVWCY
SCEAYVDNSKLHTYKNLLHRHKFGEDMVWSYPVSNCNDNVDDDADYDGDYDANAFSIQLE
PNN
NT seq
3252 nt
NT seq
+upstream
nt +downstream
nt
atgagctctcctattgttactcgtcgtggggcgcaaaaagctaaaatacaaactcgtgca
atggttaagtctgcagtcgcagcaagcaagccgagcgcagcgttagtcgaagctaaacgc
aaagcaaaattactcaaaatgcaagaacaaagccaacaagatcaagttgtgaaagatata
ttccaaaatgcggtcagcgcaaaaacaattattaaaaaacctactggcatagtatacgat
gaatctatggcgcagcaccgttgcctttgggatgaaaatcaccctgagaggccagaacgc
ttcacccgagtgttggagaggtgcaaggaactgcatctcatagaacagtgccaaagaatt
ccatcacggcgtgcaacaaaggatgaaatactcctgttgcatagcgttgagcactatgat
cttcttcagcgcacttcgggcgtgcaagacgaagcatcaatggaagaccttagctctaaa
ttcgattcaatttatatacatccgtccacatttgaattgtctctactggcgacaggttcc
accatagacttaattgaaaacgtaatagccggcaatgtgcaaaatggtatggcgatcata
cgaccacccggtcatcacgcgatgaaagctgaattcaatggttactgtttcttcaacaat
gtggccattgcaacacaatatgcgattgacattttgaagttaagcaaaataatgattgtt
gattgggacatacatcacggacaaggcacgcagcgcttcttctacaacgatccaagggtg
ctttatttttcaatacatcgttttgaacatggcaccttttggccatatcttaaagaatcg
gattttgatgctattggtaatggcaacggcacgggttacaattttaatgtacctttgaat
aaaactaaaatggggaatggagactatttggcaattttccaacagttgcttatacccgtt
gcagttgaatatcaaccagagttgattattatatcggccggctatgatgctgctttaggc
tgtcccgaaggcgaaatggaagtcacacccgcattctatgcacatttgctgaattcgctt
atgaagctggcacaatcacgtgttgccgtcatattggaaggtggttactgcctcgattcc
ttatcggagggtgcggcactcaccctgcgcaccttgctgggcggcacatgcccagcgctg
gtagagaaattggagccaccaggcgaagtcatacaggacacaatactcaattgcatttat
gctcaccgtccgtactggcggtgcctgcaaatccaaccaatatacaccatggaggagcta
aataacgtaaatccacaaccaaagttgcataaagttagtcgactatttatcggcggtgaa
ccgctgcccgaacgtttccccaccagaggcacggcaccggttatgctacccgaagttgtg
gcacagaacgagaaacgcttgaaattcctaaaacatgaaaccaaactattgacgccgcac
gtacgcgtttgctatgtttacgacgatattatgctgcagcatagcaacacctttgaggat
ggccatccagagcaacctgcgcgcattaaacgcatctatgaaatgcacatagactataag
ctcaccgaacgtatgaaacagctgccaccgcgcatagcaacaaccgatgagatttgcttg
gcgcatacgcgtgcacatgtcaatttcatacgccgcataagcgacaaggatgagctacag
aggatgggtgagaaatataattctgtctattttcatccgaagaccttcgattgtgccacc
ttggcagcgggctcagtgctgcaagtggtggacaaagtgctgagtggtgaggcgcgcagc
ggtgtttgcatagtgcgtccacctggccaccatgccgagtccgatgtgccacacggcttt
tgtatattcaataatgttgcaattgccgcgcaatatgccctacgtgaccacggccttaaa
agagtgttaattgttgattgggatgtgcatcatggcaatggcacgcagcacatcttcgaa
tcgcagtcgaatgtactctatattagtatgcatcgctacgacaacggcacctttttcccc
aaaagcaaagacgctgatttcgatgtggttggtaaagccgccggtgtgggtttcaatgtg
aatataccgtggaataaaaaaggcatgggcgatatggaatatgtgatggctttccaacaa
ctcgtaatgccaattgcatatgaattcgatccggaattggtgcttgtatcggctggcttc
gatgccgctatcggcgatccactcggtggctgtaaggtaacccccgaagcgtacggcctt
ttcacgcactggctttctggcttagccggcggccgtataattttatgcctagaaggcggc
tacaatgtaaattccatttcctactctatgacaatgtgcagcaaatcactgttgggtgat
ccgattccacccatacaagttaatggcaacactgcacgcaaccttagcgcggcatatacg
agctgtgtggaaaccatacaaaactgcttgagtgtacagcagcgttattggaagagtttg
gtgttcaacaagcggctgccacaattcgctagcgaaaataacaatgaggattttctttct
gctactatgcaaaatttagctatcaaaacggatgaggagagatgcgtgattggctgtgaa
aatgccgccgatacagaggtggctttggaaccgagcggcagtaagccgaaggtaaaagtt
aaaaccctaacagaatttctcaccgaaaatctagaggctttacaaaataatgaaatgttc
gccgttgttccattaaaaacatgtcctcatttaaaacagttgcgtcctgaggaggcgccg
aaaatcatagatagcaatgctccatgcgagaattgcttgtcaacggtcgagaactggatg
tgtctgagctgctatcaaatactctgcggtcgttacgtcatggaacacatgctcctgcac
agcatcgcaacatcacacccctttgcgcttagctttagtgatttatcggtttggtgttac
tcttgcgaggcatatgtcgacaatagcaaattacacacctacaaaaatcttctgcaccga
cataaattcggcgaggacatggtgtggtcgtatcccgttagtaattgtaacgacaacgtt
gatgatgatgcggattatgatggtgattacgatgcaaatgcatttagcattcaacttgaa
ccaaacaactga
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