Anastrepha ludens (Mexican fruit fly): 128858116
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Entry
128858116 CDS
T10909
Name
(RefSeq) probable ATP-dependent RNA helicase DDX10
KO
K14776
ATP-dependent RNA helicase DDX10/DBP4 [EC:
5.6.2.7
]
Organism
alud Anastrepha ludens (Mexican fruit fly)
Brite
KEGG Orthology (KO) [BR:
alud00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
alud03009
]
128858116
Enzymes [BR:
alud01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
128858116
Ribosome biogenesis [BR:
alud03009
]
Eukaryotic type
90S particles
Helicases
128858116
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
Helicase_C_2
Ca_bind_SSO6904
DRY_EERY
Motif
Other DBs
NCBI-GeneID:
128858116
NCBI-ProteinID:
XP_053950081
LinkDB
All DBs
Position
3:complement(66302694..66305057)
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AA seq
714 aa
AA seq
DB search
MKSKTKKGNKAISNIQNNNNEIEELKKKYDSMPTETEIKKFMDMPLSQKTQKGLSESKYI
VPTDIQRKSILPALLGKDVMGTAITGSGKTLAFLIPVIEHLYVNKWSRTDGVCAIVISPT
RELAYQIFETLKRIGKYHDFSAGLIIGGKNLKFERRRMDQCNILICTPGRLLQHMDENPL
FNASTLEVLVLDEADRCLDMGFEETLNSIVENFPTERQSLLFSATQTKSVKDILRLNLRD
PIFIGNEKTKSEDIIPVLLQQNYVVIELEDKITMLWSFLKNHLKQKIIVFFSSCKQVKYI
FEIFCKLRPGTSLLALYGTLHQDRRIAIYNDFTRKSNVVLFATDIASRGLDFPTLNWVVQ
MDCPEDATQYIHRAGRTARNQARGESLLVLTPFEEPGMIKELQSRNIQIQKIHIDPQKLF
SPRLKIEAALAQNTELKATAQRAFVSYIKSIFLMRNKDIFDVFKLNLESYAKSLGLAVTP
RVRFLERLLKKTSSISTTLAEPNGFIQEDSDNEDFFKVKRIDHELANDTNDIVVDLPKKS
KVLSKAAVAKKAIRKKIQANEKINFDDDGNVVIDKRKQLQSELPTEYENNAGGINIEVAR
KILSEEDKFDKERFRELVKNRHKKQKDKLKKLVDENSQSDFEDSESDNDVDLSWLPDPDK
VYNSNQKTDESKETPESDSEEDIEEPSHKKVKLTAKLTLNDAESIAAQLLANKM
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgaagagtaaaactaaaaaaggaaataaggcaattagtaatatccagaacaacaataat
gaaatcgaagaactcaaaaagaagtatgattcgatgccgactgaaactgaaattaaaaaa
tttatggatatgccgctctctcaaaagactcaaaaaggattgtcggaatccaaatatatt
gttccaacagatatacagcggaaaagtatattgccagcattactcggaaaggatgtaatg
ggaactgcgataactggaagtggaaaaacactggccttcctcatccccgttattgaacat
ttatacgtgaacaaatggtcacgtaccgatggcgtatgcgcgattgttatttcaccaacg
cgcgagttggcgtatcaaatattcgagacattgaagcggattggaaaataccatgatttt
tctgctggactcatcattggtgggaaaaacctgaagtttgaacgaagaagaatggatcag
tgcaatatattaatatgtacgcctggcagactgctgcaacatatggatgaaaatccatta
tttaatgcaagtactcttgaagttttggtattggacgaggctgacagatgtttggatatg
ggatttgaggagacccttaactccattgttgaaaatttcccaacagagcgccaatcattg
ttattttctgctacccaaactaaatctgtaaaagatattttgcgacttaatttacgtgac
ccaatttttattggtaatgaaaaaactaagtctgaggacataataccggtattattacaa
caaaactatgttgtaattgaattggaggataaaattacaatgttgtggtcatttttaaaa
aatcaccttaagcaaaagattattgtatttttttccagttgtaaacaggtgaaatatatc
tttgaaatattttgtaaacttcggcctggcaccagtttgctggctctgtacggcactctt
catcaagatcgaagaattgcaatatacaatgattttacacgcaaaagcaatgttgtatta
tttgctaccgatattgcatcgcgtggtttggattttccaacactaaattgggttgtgcaa
atggattgcccagaagacgcaacacaatatatacatagagctggaagaacagcgagaaac
caggcgcgtggagaaagtctccttgtcttgacacctttcgaggagccaggcatgataaaa
gagctgcaaagccgaaatatacaaattcaaaagatacatattgatccacagaaactgttt
tcaccaagattgaagatagaagccgctttagcacaaaatacagaactgaaagcaaccgcg
caacgtgcctttgtatcatatattaaatctatattccttatgagaaacaaagatatattc
gatgtgttcaaattaaatcttgaaagctacgccaaatcacttggactcgctgttactccg
cgagtacgttttctagagcggctattaaagaaaacctcttccatatcaacaactttggct
gagccaaacggttttatacaagaagattctgataatgaggatttctttaaagttaaacga
attgatcacgaacttgcaaatgacacaaatgatattgttgtagatcttcctaaaaaaagc
aaagtcttatccaaagctgctgtggcgaaaaaagcgataagaaaaaaaattcaagcaaat
gaaaaaattaatttcgatgacgatggcaatgttgtaattgataagagaaagcaactgcaa
tctgaactgcctacggaatatgaaaataatgctggaggaataaatattgaggttgcaaga
aaaattttgtcagaagaagataaatttgataaagaacgattcagagaacttgttaaaaat
cgtcataagaaacaaaaagataagttgaaaaaacttgttgacgaaaattcccaaagcgat
ttcgaggatagtgaaagcgataatgacgtggatttatcctggttaccagatcctgataaa
gtgtacaactcaaaccaaaagacagatgaatcaaaagaaacacctgaaagtgatagcgag
gaagacattgaagagccttcccataaaaaagtgaagttgactgcgaagctaacattaaat
gatgctgaatcgatagctgcacaacttttagctaataaaatgtag
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