Anastrepha ludens (Mexican fruit fly): 128858322
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Entry
128858322 CDS
T10909
Name
(RefSeq) exosome complex component CSL4
KO
K07573
exosome complex component CSL4
Organism
alud Anastrepha ludens (Mexican fruit fly)
Pathway
alud03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
alud00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
128858322
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
alud03019
]
128858322
Messenger RNA biogenesis [BR:
alud03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
128858322
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
128858322
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GFIT
Motif
Pfam:
EXOSC1
ECR1_N
S1_RRP4
ECR1_N_2
Peptidase_S26
Motif
Other DBs
NCBI-GeneID:
128858322
NCBI-ProteinID:
XP_053950468
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Position
3:complement(84445263..84446417)
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AA seq
218 aa
AA seq
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MELQSSLATSSNLEDIKEVVCLPGQRICLSEETIVAGQGTYERGGYIYATLAGTVRVKEK
DKCKYIEVKCAGSQTIVPVAGDVITARVLQVNQRFAKCSIICIGDHILERTYRGIVRKED
VRATEKDRVEMYKSFRAGDVILARVLPQTELSCYQLSTAENELGVVVATSSESGASGPPM
VPVSWTEMQCPDTLVKEPRKVAKIVAESSLKTELPQEK
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atggaacttcagtccagtcttgctacctcaagtaatttagaggatataaaagaggttgta
tgtttaccgggacaaagaatatgtctttccgaggagaccatagttgcaggtcaaggcaca
tatgaacggggcggttacatttacgctacattggctggtaccgtgcgggttaaagaaaag
gacaagtgtaaatatatcgaagtaaaatgtgctggcagtcagactattgtacctgtagca
ggcgatgtaataacggcgcgtgtcctccaagtgaatcaacgttttgcaaagtgttccata
atctgcatcggagaccacatacttgaacgtacgtatagaggaattgtacgaaaggaagat
gttcgtgccaccgaaaaggatcgtgtcgaaatgtataaatcatttcgtgcgggcgatgtc
atactagcccgagtgcttcctcaaacagagttatcctgttatcaactaagtactgcggaa
aatgaattaggcgtagtggttgcgacttctagtgaaagtggtgcgagtggaccaccaatg
gtgcctgttagttggacggaaatgcaatgtcccgatacattagtaaaggaacctcggaaa
gttgcgaaaatagttgcagaaagttccttaaaaacagagctgccacaagagaagtag
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