Anastrepha ludens (Mexican fruit fly): 128858897
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Entry
128858897 CDS
T10909
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC1
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
alud Anastrepha ludens (Mexican fruit fly)
Pathway
alud03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
alud00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
128858897
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
alud03021
]
128858897
Enzymes [BR:
alud01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
128858897
Transcription machinery [BR:
alud03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
128858897
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_binding
Motif
Other DBs
NCBI-GeneID:
128858897
NCBI-ProteinID:
XP_053951436
LinkDB
All DBs
Position
3:119261759..119276472
Genome browser
AA seq
1377 aa
AA seq
DB search
MPKEQFREADVIKKISHVQFCISSPEEIQQEAHLRIVSKNLYQGQRQPVPYGVLDKRMGV
STKDATCDTCGQGLNECIGHFGYLDLALPVFHVGHFRATISILQMICKSCSHVMLREQDK
RIFEKKLLNPDLSYLAKKSLHGQILGKAKKLAKCPNCDAPSGGVKKGQGLLKILHDPCKG
KKPDAVMSDALNELLLATENNRELQQTLTSHNQVEELNPLTVLELFKSIPKSDIPLLGMT
SGYASPANLIVTRIFVPPVCIRPSVLSEVKAGTTEDDLTMKQSEILLINDVIQKHMTGGG
KIELIQEDWDFLQLHVALYFHSELSGIPLNMAPKKMTRGIVQRLKGKQGRFRGNLSGKRV
DFSGRTVISPDPNLMIHQVGVPERVAKILTYPERVNPANIQKMKELVKNGTQKHPGANYV
QQRGSTFKKYLAYGNRDKVAHDLMCGDIVERHLCDGDIVLFNRQPSLHKMSIMCHQAKVQ
PQRTFRFNECACTPYNADFDGDEMNLHLPQTEEARAEALILMGNKSNLITPKNGEILIAA
TQDFITGGYLLTQKDEFLTKEQAMQLAACFLAGPDANMRIDMPPPAILKPRKLWTGKQIF
SLLLRPNTQCPVKANLITKGRNYTSNYDLCVRDSWVIVRNSELICGSMDKSTLGSGTKNC
IFYAILRDFGELYATKCMWRLARIASYFIQNRGFSFGISDVTPSNKLLEEKQKLLENGYA
KCDEYILEMKKGTLQCQPGCTPEQTLEAVMLRELSSIREQAAKACFRELHPTNSALIMAL
SGSKGSNINISQMIACVGQQAINGKRVPNGFENRALPHFEKFSAIPAARGFVQNSFYSGL
TPTEFFFHTMAGREGLVDTAVKTAETGYLQRRLVKCLEDLVVHYDGSVRNAIGEIVELIY
GGDGLDPVFMEVKNKPVDMVRQLNHLRATVSDRKSTPLGASEITPVARKILADDEFTMSR
KDFQNEIIAFIEKVAQKIADVQAKYRRHPKLAHEIERFTEEQIRTFMRWVNDKYNRAVTE
PGTAVGAVAAQSIGEPGTQMTLKTFHFAGVASMNITQGVPRIVEIINATKTISTPIITAE
IENNTNMEFARKVKARIEKTTLGEISSYIEEVYRPDDCFLVIRLDLNRIRVLGLEINAET
VRYSICTSKLRIKPALVDVVGASVITVHIDTSKHGATLNAELQRLTISIQNVVVAGLSNI
SRAVIAIDDARTPSTYKLCIEGAGLRDVMATFGVVGTRTKSNNIWEVYNTLGIEAARTTI
MTEITDVMEGHGMSVDHRHIMLLASQMTSRGEVLGITRHGLAKMRESVFNLASFEKTADH
LFDAAYFGQIDAVDGVSERIILGMPASIGTGLFKLIHNHEDTALPQVEPPIFQTVTA
NT seq
4134 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaagagcagtttcgcgaagcagatgtcataaaaaaaatttcccatgtgcaattt
tgcattagcagcccagaagaaatccagcaggaagcgcatttacgtattgtttcaaaaaat
ttgtatcaagggcaacgtcaacctgttccttatggcgtgctggataagcgcatgggtgta
agcaccaaagatgccacctgtgatacttgtggccagggtttaaatgagtgtattggtcat
tttggttacttggatcttgctttaccagtatttcacgtaggtcatttccgtgcaacaatt
tcaattttacagatgatttgcaaaagttgctcgcatgtaatgcttcgggagcaggataag
cgcatatttgagaagaagctgctaaatccagacctgtcgtatttagcaaagaagtcgttg
cacggccaaattttaggtaaagcaaaaaaactggcaaaatgtcccaactgtgatgctcct
agtggaggcgttaagaaaggtcaaggactactaaagatactgcatgacccatgcaaagga
aaaaaaccagacgctgtcatgagtgatgcgctaaacgagttattgctggcgacagaaaat
aatcgcgaacttcaacaaacgttaacatctcacaaccaagtagaggaactaaatccatta
acagtattggaattatttaaaagtataccgaaaagtgatatacctttgcttggtatgact
tccgggtatgctagtccagcaaatttaatagtgacgcgcatttttgtaccgccagtttgc
atacgtccctcggttttgtccgaagttaaagctggaactactgaagacgatttgacaatg
aaacaaagcgaaatattgctcatcaacgatgttatccaaaaacatatgactggcggtggc
aaaatcgaacttattcaagaagattgggactttttacaactacacgttgcactgtatttt
cacagcgaactctctggtattccactaaatatggcgccgaaaaagatgacacgaggtatt
gtgcaacgcttaaagggcaaacagggtcgctttcgtggcaatttatctggcaaacgtgtt
gacttctctggacgcacagtcatatcacccgatccaaacctaatgatacaccaagtaggc
gtaccagaacgcgtcgccaaaatacttacctacccggagcgtgtgaatcccgcaaatata
caaaagatgaaagagctcgtgaaaaatggtacacagaaacatccaggtgccaattatgta
caacaacggggttcaacattcaaaaagtatctcgcatacggtaatcgtgacaaagttgcg
catgatctaatgtgtggtgacattgtcgagcgacatttgtgcgatggcgatatagtgctc
ttcaatcgccaaccctcattgcataaaatgtctattatgtgccatcaggctaaggtgcaa
ccacagcgaacattccgtttcaatgaatgcgcatgcacaccctataatgctgatttcgat
ggtgacgaaatgaatttacatttgccacagacagaggaggcacgtgcggaagcacttata
ctcatgggcaataaatccaatttgattacacccaaaaatggagaaatactcattgcggca
acacaagatttcattacaggcggctacctattgacacaaaaagacgaatttcttactaag
gaacaggctatgcaactggctgcatgctttctagctggaccagatgctaatatgaggatc
gatatgccaccgccggcaatattaaaaccacgaaaactctggacgggcaaacaaatattc
agtctactgttgcgtccgaacacacaatgtcctgtaaaggcgaatttgataacaaaagga
cgcaactacaccagtaactacgacttgtgtgtgcgagattcatgggtcattgtgcgtaat
tcagaactcatttgtggttcaatggataagagcacattgggttctggtacgaaaaattgc
atattctatgctatattgcgggactttggagaactgtacgccaccaaatgcatgtggcgt
ttagcgaggatcgcttcatatttcatacaaaatcgtggcttctcctttggcatcagcgat
gttacaccaagcaataagttgctggaggaaaaacaaaaattattggaaaatggttatgct
aaatgcgatgaatatattttagagatgaaaaagggtacattacaatgtcaaccaggttgt
acacccgagcaaacgctcgaagcagtaatgttgcgtgagctctcatccattcgtgaacag
gcagctaaagcttgcttccgtgagctgcatcctacgaatagtgcacttattatggcgctg
tccggttcgaaaggctccaacatcaatatttcacaaatgattgcatgtgtcggtcagcag
gccattaacggcaagcgggtgccaaatggatttgagaatcgtgctttgccacatttcgag
aaattctcggctataccggcagcccgtggatttgtgcaaaatagtttctactctggtctg
acgcctacggaatttttctttcatacaatggctggtcgtgaaggtttggtcgatacagct
gtcaaaacagccgagactggctatctacagcgccgtttagtgaagtgcctggaagatctg
gtcgtgcattatgatggttccgtgcgtaatgccatcggtgaaatagttgagttaatctat
ggtggcgatggtttagatccagtttttatggaagttaaaaacaaaccagtagacatggtg
cgccaattaaatcatttacgagctacagtatcagatcgcaaaagcacaccactaggagcg
tctgaaattacgccggtggcacgtaaaatactagcagatgatgagtttaccatgagtcga
aaagatttccaaaacgaaattattgctttcattgaaaaagtagcgcaaaagatcgcggac
gtgcaggcaaagtacagacgacatccgaaattggcgcacgaaattgaacgcttcaccgaa
gaacaaattcgcacttttatgcgttgggtcaatgataaatacaaccgtgccgttactgag
cctggcacggctgtgggtgccgtagctgcgcaaagtattggtgagccaggcacacaaatg
acactgaagacgttccattttgctggtgttgcctctatgaacatcacacagggtgtaccg
cgtattgttgaaattattaatgcaacaaaaacaatttcgacaccaatcataacagccgaa
attgaaaacaacacgaacatggaatttgcacgtaaagtgaaggcgcgcattgagaaaaca
acgttgggagagatttcatcgtacattgaggaagtatacaggccagatgattgcttctta
gtcatacgtttggatttaaatcgtattcgggttttaggtttagaaattaatgctgagact
gtgcgttactctatttgcacctcaaaattacggataaaaccagcgctggtagatgttgtc
ggtgcttcagtgatcacagtgcatattgatacgtcaaaacatggtgccacactcaacgct
gaattgcaacgtctcactatatctatacagaatgtcgtcgtagctggtttatcgaatatt
tcacgtgccgttatcgcaatagatgacgcgcgcacaccgtccacttacaagctatgtatt
gagggcgctggtttgcgcgatgttatggccacgtttggcgttgtgggcacgcgcaccaag
agcaacaacatctgggaagtgtacaatacattaggcattgaggcagcgcgcactaccatt
atgactgaaataaccgatgtgatggaaggtcatggcatgagcgtggatcatcgtcatata
atgttgctggccagtcagatgacctcgcgcggtgaggtgttgggtataacgcgacatgga
ttggcaaaaatgcgagagagtgtatttaatttggcatcgtttgaaaaaaccgccgatcat
ctattcgatgccgcttactttggccaaatcgatgccgtggatggtgtttcggagcgtatt
attctaggcatgcctgcctcaattggtactggactatttaagcttatacacaaccacgag
gacaccgcattgccgcaagtggaaccaccaatatttcagaccgttacagcgtga
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