Anastrepha ludens (Mexican fruit fly): 128859643
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Entry
128859643 CDS
T10909
Name
(RefSeq) splicing factor 3B subunit 3
KO
K12830
splicing factor 3B subunit 3
Organism
alud Anastrepha ludens (Mexican fruit fly)
Pathway
alud03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
alud00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128859643
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
alud03021
]
128859643
03041 Spliceosome [BR:
alud03041
]
128859643
03036 Chromosome and associated proteins [BR:
alud03036
]
128859643
Transcription machinery [BR:
alud03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
128859643
Spliceosome [BR:
alud03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
128859643
Complex B
128859643
Complex C
U2 SnRNP specific factors
128859643
Chromosome and associated proteins [BR:
alud03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
128859643
TFTC complex
128859643
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_BBS7
Motif
Other DBs
NCBI-GeneID:
128859643
NCBI-ProteinID:
XP_053952584
LinkDB
All DBs
Position
4:14975516..14984102
Genome browser
AA seq
1227 aa
AA seq
DB search
MYLYNLTLQKGTGITHAVHGNFSGGKQQEVILSRGKSLELVRPDSNTGKVHTVLSVEVFG
CIRALMSFRLTGGTKDYIVVGSDSGRIVILEYNPTKNSLDKVHQETFGKSGCRRIVPGQY
FAIDPKGRAVMIGAVEKQKLAYILNRDTQARLTISSPLEAHKSNTLTYHMVGVDVGFDNP
LFACLEIDYEEADNDPTGEAAQRTQQTLTFYELDLGLNHVVRKYSEPLEEHANFLISVPG
GNDGPSGVLICSENYLTYKNLGDQHDIRCPIPRRRNDLDDPDRGMIFICSATHRTKSMYF
FLVQTEQGDIFKVTLETDDDVVSEIKLKYFDTVPPAIAMCVLKTGFLFVACEFCNHYLYQ
IAHLGDDDDEPEFSSAMPLEEGETFFFAPRPLKNLVMVDEMPSFAPIVSSQVADLANEDT
PQLYVLCGRGPRSSMRVLRHGLEVSEMAVSELPGNPNAVWTVKKRIDDEFDAYIIVSFVN
ATLVLSIGETVEEVTDSGFLGTTPTLSCSSLGDDALVQVYPDGIRHIRSDKRVNEWKAPG
KKSITKCAVNQRQVVITLSGRELVYFEMDATGELNEYTERSEMPNEIMCMALGQVPEGEQ
RSWFLAVGLADNTVRIISLDPNDCLSPCSMQALPSPAESLCIVEMGHTESTTSGANDEPG
DRTTNTSTKGTIYLNIGLSNGVLLRTVLDPVSGDLADTRTRYLGSRPVKLFRIRMQGSEA
VLAMSSRTWLSYYHQNRFHLTPLSYETLEYASGFSSEQCSEGVVAISTNTLRILALEKLG
AVFNQVSFPLEYTPRAFAIHPDTGRMIIAETDHNAYTDETKNARKQQMAEEMRMAAGDEE
RELANEMANAFISEVLPEETFSSPKAGLGLWASQIRGLDPIHGHTFFKIPFVQNEAIMSM
CILKFNIAADGRYYLALGVAKELQLNPRITNGGCIDIYKIDPTCSNVEFMHRTEIDEVPG
ALASFQGRLLAGCGRILRIYDLGKKKLLRKCENKHIPYQIVNIQAMGHRVYVSDVQESVF
FVRYKRAENQLIIFADDTHPRWVTATTLLDYDTIAIADKFGNMSVQRLPHSVTDDVDEDP
TGTKSLWDRGLLSGASQKSENISSFHVGEIIMSLQKATLIPGGSEALIYATLSGTVGAFV
PFTSREDFDFFQHLEMHMRNENPPLCGRDHLSYRSSYYTVKNVLDGDLCEQYLSIDPAKQ
KSIASDMFRTPNQICKKLEDIRTRYAF
NT seq
3684 nt
NT seq
+upstream
nt +downstream
nt
atgtatctatacaatttaaccttacaaaaaggcactggcattacacatgccgtgcatggg
aacttctctggtggaaaacagcaggaggtgattctctcccgtggaaaatccttggagttg
gtacgcccagattcgaatacgggaaaggtacacacggtcttgtctgtagaagtttttggg
tgtatacgtgccttgatgtctttcagactgacgggaggaactaaagattacattgtcgtt
ggctccgattcaggacgaattgttattcttgagtataatcctaccaagaattctctagac
aaagtgcatcaagaaacttttggcaaatctggttgtcggcgtattgttccagggcaatat
tttgctatagatcctaaaggacgtgctgttatgataggtgcagtggagaaacagaagttg
gcctacattctcaatcgtgatacgcaagctcgtcttacaatatcctcgcctttggaagca
cataaatcgaatacgctcacctatcatatggtaggagttgatgtcggttttgataatcca
ttatttgcatgcttagaaatcgactacgaagaagcagataatgatcctacaggcgaagct
gcacaacgcacgcagcagaccttgacgttctatgaattggatctgggtcttaatcatgtt
gtacgcaagtactctgaaccacttgaggaacacgcaaacttcttaatatctgtaccaggt
ggtaatgatggcccatccggagtactgatttgttcggaaaattatcttacatataaaaat
ttgggtgatcagcatgacattcgctgtcccataccacgcaggcgaaatgatttggatgat
cctgatcgtgggatgatattcatttgttcggctacgcatcgtacaaagagcatgtacttc
tttttggtgcagaccgaacagggtgatatattcaaagtaactcttgaaacagatgatgat
gttgtatctgagatcaaactcaaatatttcgatactgtaccgccagctattgccatgtgt
gtattgaagactggtttcctgtttgtagcttgtgaattttgcaaccattatctctatcaa
attgctcatcttggagatgacgacgatgaacctgaattcagctcagctatgcccctcgaa
gaaggcgaaacgttcttttttgcgccgcgaccattaaaaaatctcgttatggttgacgaa
atgccttcttttgcacctatagtttcgtcacaagttgctgatttggccaacgaagacacc
cctcaactttatgtgttgtgcggcagaggtcctcgttcttcaatgcgtgtcctgcgacat
ggcttagaagttagtgaaatggctgtatcagaactaccaggaaatccaaacgctgtatgg
acggttaagaagcgaattgatgacgagttcgacgcttatataatagtgtcatttgtgaat
gctacgcttgttttaagcattggtgagaccgtcgaagaagtaacagacagtggtttccta
ggaaccactcccactttgagttgttcttctttgggtgatgatgctctggttcaagtgtat
cccgatggtatacgtcatatacgttctgataagcgtgtgaatgaatggaaagctcctgga
aagaaatcgattacaaaatgtgccgtaaatcagcgtcaagtggtaatcacgctgtcagga
agagaactagtttacttcgaaatggatgccactggcgaactgaacgaatatactgagcgt
tcggaaatgcctaatgaaatcatgtgtatggctctcggtcaagtaccggagggcgaacaa
cgctcgtggtttttagctgttggtttggctgacaacactgtacgcattatctctttagat
ccaaatgattgtctttcaccctgctctatgcaagctttgccatcacctgccgagtcgctt
tgcatagtcgaaatggggcatacagaaagtactacaagtggtgcaaatgatgaacccggt
gatcgtactaccaacacttctacaaagggcacaatttaccttaatattggcctgagcaat
ggtgtgctattgcgtactgtattagacccggtatctggcgacttggctgacacgcgtact
cgttatcttggctctcgaccagtaaagctctttcggatacgaatgcaaggctcggaagct
gtacttgctatgtctagtcgcacttggctctcatactatcatcaaaatcgattccaccta
acaccattatcttatgaaacccttgaatatgcttcgggattctctagtgaacagtgtagc
gaaggagtcgttgccatctcgaccaatacgctgcgtattttggctttggaaaaattgggc
gcagtatttaaccaggtttcttttcctcttgagtacacaccacgcgcttttgctattcat
ccagatacgggtcgtatgattattgcggaaactgatcacaatgcatacacagatgagaca
aaaaacgcacgtaaacagcaaatggcagaagaaatgcgaatggctgcaggcgatgaggaa
cgcgagttggccaatgaaatggcgaatgcatttattagcgaagttttacctgaggaaacg
ttctcgtcacctaaagctggcctgggtttgtgggcttcgcaaatacgtggattggaccct
atacatgggcatacattttttaaaataccatttgtgcaaaatgaagcaatcatgtccatg
tgcattctcaagtttaacattgctgccgatggacgatattacttggcacttggtgtggct
aaagaattgcagctaaacccgcgtataacgaatggtggttgtattgacatttacaaaatt
gatcccacctgctcgaatgtagaatttatgcatcgcaccgaaatcgatgaagtaccgggt
gcattggccagtttccagggacgattattggcaggttgtggtcggatattacgaatttat
gacttggggaaaaagaagttgcttcgcaagtgtgaaaataaacacattccatatcaaatt
gtcaatatacaggcaatggggcaccgcgtctatgtgtcggatgtacaagaatcagttttc
tttgtacgatataagagagcagaaaatcaacttatcattttcgcagatgacacacatcca
cgttgggtaactgctaccaccttattggactacgatacaattgccatcgctgataaattt
ggcaatatgagtgtgcagcgattaccacactctgtaacggatgatgttgatgaggatcca
actggcactaaatcgctgtgggaccgcggtttgctgtctggagcgtcacaaaaatcggag
aatatttcctcttttcatgtgggtgaaatcataatgtccttgcagaaagctactttaata
cctggtggctccgaagcattaatatacgcaacacttagcggtaccgtcggtgcttttgta
ccatttaccagtcgcgaggacttcgacttcttccaacatttggagatgcatatgcgcaat
gaaaatccgccactatgtggtcgcgatcatttgagctacagaagttcatactataccgtg
aaaaatgtgctggatggcgatttatgcgaacagtatttatctatagacccggccaaacag
aagagcattgccagcgatatgttccgaactccgaaccagatatgcaaaaaactggaggat
atacgcacgcgctacgctttttaa
DBGET
integrated database retrieval system
