Anastrepha ludens (Mexican fruit fly): 128859822
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Entry
128859822 CDS
T10909
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 5
KO
K14397
cleavage and polyadenylation specificity factor subunit 5
Organism
alud Anastrepha ludens (Mexican fruit fly)
Pathway
alud03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
alud00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
128859822
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
alud03019
]
128859822
Messenger RNA biogenesis [BR:
alud03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
128859822
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUDIX_2
NUDIX
Motif
Other DBs
NCBI-GeneID:
128859822
NCBI-ProteinID:
XP_053952889
LinkDB
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Position
4
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AA seq
234 aa
AA seq
DB search
MSQVSNKSGTGWPRRSSQGHVDSNVNNGLQKYSTGQCLAINRTINLYPLTNYTFGTKEPL
FEKDPSVPSRFQRMREEFDRIGMRRSVEGVLLVHEHGLPHVLLLQLGTTFFKLPGGELNA
GEDEVEGLKRLLTETLGRQDGVKQDWIVEDTIGNWWRPNFEPPQYPYIPPHITKPKEHKR
LFLVQLHEKALFAVPKNYKLVAAPLFELYDNSQGYGPIISSLPQALCRFNFIYM
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaggtgtcgaataagtctggaactggctggccacggcgaagtagtcagggacac
gtagatagcaatgtaaataatggcttacaaaagtactcgaccggtcagtgcttggctata
aatcgcacaatcaatttatatcccttaaccaattacacatttggaacaaaggagccattg
tttgagaaagacccatcagtaccatcgagatttcaacgtatgcgagaggaatttgatcgt
attggaatgcggcgctcggtggaaggcgtcctcttagtccatgaacatggtttaccacat
gtattactccttcaattgggtacaacattttttaagcttcccggaggcgagctcaatgca
ggggaagatgaagtagaaggtctgaaaagacttctaactgaaactttgggacgacaagat
ggagtaaaacaggactggattgtagaggacacaattggaaactggtggcgtccgaatttt
gaacctcctcagtatccatacattccaccacatatcacgaaaccaaaagagcacaagaga
ttgtttttggtgcagctgcatgaaaaggctttatttgccgttcctaaaaattacaagctc
gtagcagcacccttatttgaactctatgacaattctcaaggatatggcccaataatatca
tcacttcctcaagctctatgcagattcaattttatttatatgtaa
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