Anastrepha ludens (Mexican fruit fly): 128859941
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Entry
128859941 CDS
T10909
Name
(RefSeq) uncharacterized protein LOC128859941 isoform X1
KO
K10706
ATP-dependent RNA/DNA helicase, senataxin [EC:
5.6.2.5
5.6.2.3
]
Organism
alud Anastrepha ludens (Mexican fruit fly)
Brite
KEGG Orthology (KO) [BR:
alud00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
alud03021
]
128859941
Enzymes [BR:
alud01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
128859941
5.6.2.5 RNA 5'-3' helicase
128859941
Transcription machinery [BR:
alud03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
128859941
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_11
AAA_12
FHA
Yop-YscD_cpl
AAA_19
AAA_30
UvrD-helicase
AAA_16
NAT10_TcmA_helicase
SLFN-g3_helicase
AAA_22
Motif
Other DBs
NCBI-GeneID:
128859941
NCBI-ProteinID:
XP_053953084
LinkDB
All DBs
Position
4:complement(78787451..78808161)
Genome browser
AA seq
1846 aa
AA seq
DB search
MAGRMNRVLSSWILERKVIGDRIRLNVGITAIGRMPGTALCILDSQYVSRKHAEIIVDEH
EKIVLRDLDSANGTFVNGTKIKNESIALNANDCIGIGVTDDFEPDLKHPIYKLIYAPMQR
AASIDQDHVRNDEQQIMNYPLPANARPDNQKILEKETDGDASISSAKSSPSTSTINQMES
KCETVARSNNIDSAISGIDIISATTPKTSGDLNQLPISGIRHKVVDSLPPAATAAKKSEQ
ISPNVKCAPSLSNAPTLFSGAIIIVSDDEDDVINLIKEENIQSQIANKSECIQNAQSSDQ
EICNKSNEVPPNKSSSTKDTISMLQAPNDAAIHEPILPEVKREFIRSCTENVVEIFGRAD
DIILDSVKGISPLVYTTLNGRNSNKMLYDGDSIDLLSDNEDDGANIAEYVESFGKLVPEI
GEKQNSTKTKENIAVNNILLDNSLNSSKNNGDEQKGLNVGQASVSGENQDVEIKTEKSTK
MPEEPAEFVDIDDDMWFSQILINDIKSEMMADNNESDLPAEDDAPDDDMTKNDGQDNLLD
VFIKKEIIDNDLSNPVSITAKQESKSADIENDVWITIDDDEEFEHQVSDWSTKLLSQKMN
MSQVFELQSDKQQDLDENNPNAGKEGNLKLDCNSEDFDEFFNEALVDDVIETLAKKNGEI
KNETRAPSLERQLSSDSDSNNDFERNKELLPKREEVKIHVNYSGAATERKASPALTGAPE
DLKAGISSKSFRRLEKDLNSDSKESITSKEKVELRKDLIKPVKRLHHPPSIIEAPNLPKH
KGKHRGVSAESRPTAVCTNNIRKKAIAVSGQLKDEGYREELKRKWFEKPADERRREKEKR
RVIQESRKERLKELAGKQSAGSAKELLKRKHDAEHESGEKKKAKVKITTRNRGALLAEDI
GAVKKNIGSYKIPKIKQCSSGITNAHREPPITDTATTTKPNHSTVVDAFAQEMRKLDKII
SRRFSTSSSSKTVSSVEENKNENTLEETKINAPVRRINKITFASMQKNFAETRKNQELLQ
KFAINRSCLIDVVHRNANKERQKKRVRFNDTPIVHLIERINGANKRVDRKDILPSPTCAD
RAHMIRSAYKMIDQTAEIISKILGWSNEWLVNRNAHVDAASDIVLPMPNQFTTFNHYKSI
ITPLMKLEFISVLEREKNRCKSKTFIISAEQVTPSTDRFRIMGRYAGVNNSGSKSELVVL
EWGKFTAFAYMSGRRLGFNTTTVVYDVLAEGLLLEELRSCLNTPMKVRPMIDIVRVEVGA
FNAVFQLEQSPLLNQILDPRELCKLKPLPKCDIQYNGCDDLNDRQKDVLFRTYRRAIEPT
PNITLIQGPPGTGKSCVIGNLVHQLLYGNEVRILDQKILVCAQSNAAVDVIAEKLYIMSQ
KKLPEVMFRLIRFGLMERISPKVHHATLPKIIERNQIRKLKMSHKNLQIDDKVHIKEYLR
NEIVQLEAAIEVMKLKNVKGTVQEEELLEKTRQVQLMQNIVNGVLRPEDERSLYNWHLKH
AHVVCTTLSSCVKLSQYINYFDVCIIDEATQCTEPWTLMPLKFGINALVLVGDTQQLPAT
VLSKKASDFGLGTSLFTRIQRCIESVNLKNVPNGLNAHEKTSVSNKNDIIFSLRTQYRMH
PEICKWPNSYFYKNQLIDDPKTHKFKPVLKPFSILNLTYTQDENCLRGQIVNELEAKFVA
RFVKTLDGYIPMKYNTYGVITPYAQQRGALEKALRTSGFTNVMVNTIDSYQGMERDVIII
SNARTNGIGFLANYQRLNVALTRPKKCLILCGNFKNLETVPAWRSLLAAARERKLYHELS
ADCMDDMHRNVIPRIKISKAAAATEVAAATTSKELTVVAGTSNQAR
NT seq
5541 nt
NT seq
+upstream
nt +downstream
nt
atggctggccgcatgaatcgtgtactatcttcctggatcttggagcggaaggtgattggc
gaccgtatacgccttaacgtgggtattacggctataggccgaatgcctggaactgcacta
tgcatattagattctcaatatgtctcgcgcaaacatgctgaaattattgtagacgaacat
gagaaaattgtactaagggacctggattctgcaaatggaacttttgttaatggaactaaa
ataaaaaatgaatcgattgccttaaatgcaaatgattgcataggtattggtgttacggat
gatttcgaacccgatctcaaacacccaatatataaactaatatatgctccaatgcaaaga
gcagcgtccattgatcaagatcacgttagaaatgatgagcagcaaattatgaactatcca
ctacctgctaatgccagaccagataatcaaaaaatcttagaaaaagaaacagacggggat
gcctcaatttcctcagcaaaatcttctccatcgacttctacaataaatcagatggagtct
aagtgtgaaacagttgcaagatcaaataatattgattcggcaatttcaggcatcgacata
atttctgcaaccacgcctaagacaagtggtgacctaaatcaacttccaatttcaggaata
aggcataaagttgtagactcccttccaccagctgcaacagctgcaaaaaaatctgaacaa
atatcacccaatgttaagtgtgctccgtcattatcaaatgcgccaacactattctctggt
gcaatcattattgtgagtgatgacgaagatgacgttataaacttaatcaaggaagagaat
atacaatctcaaattgccaataaatccgaatgcatacaaaatgcacaatcatctgaccaa
gaaatatgtaataaatcaaacgaagtgcctccgaataaaagttcttcgaccaaagataca
atttccatgttgcaggcgccaaacgatgctgccatccatgaacccatattacctgaggtt
aaacgtgaattcatacgttcatgcacagaaaatgtagttgaaatatttgggagggctgat
gatataattcttgatagcgtcaagggaataagtcctttagtatacacaactcttaatggc
agaaattcaaataaaatgctttatgatggagatagtattgacttgttaagtgacaacgag
gatgacggtgctaatattgcggaatatgtggaaagtttcggtaaattagtacccgaaata
ggagaaaaacaaaactctactaaaactaaggaaaatatcgctgtaaacaatattttgttg
gataattcattgaacagctcaaaaaacaatggcgatgaacaaaagggtttgaatgttgga
caagccagtgtttcgggagaaaatcaagacgttgaaattaaaactgagaagtctacgaaa
atgccagaggagccggctgagttcgtagatatcgatgatgatatgtggttttcacaaatt
ttaataaacgacatcaagtctgaaatgatggctgataataatgaatccgatttgcctgct
gaagatgatgcacctgatgatgatatgacaaaaaacgatggtcaagacaacttgctggac
gtgtttattaaaaaagagataattgataacgacctgtcgaatccagttagtattacagca
aaacaagagtcaaaaagcgctgatatagaaaatgacgtgtggattacaatagatgacgat
gaagagttcgagcatcaagtatcagactggagcactaagttgttgtcacaaaaaatgaat
atgtcgcaggtatttgagttgcaaagtgataaacaacaagatttagatgaaaacaatcca
aacgctggaaaggaaggaaatctgaaactagactgtaacagcgaagatttcgatgaattt
ttcaatgaggctcttgtagatgacgtgattgagacattagctaaaaaaaatggggaaatt
aaaaacgagactagagcgccatcattggagcggcaactctcaagtgacagtgacagcaat
aacgatttcgagagaaataaggaattgttaccaaaacgagaagaggttaaaatacatgtt
aactacagcggagcagcaactgaaagaaaagcaagtcctgctttaactggagcccccgaa
gatctgaaagctggtattagtagtaaaagttttagacgtctggaaaaagatttgaactct
gacagtaaagaaagtattacctctaaagagaaggtagaactgcggaaagatttaataaaa
ccagttaaacgcttgcatcatccaccttctataatcgaagcgccaaatttgcctaagcat
aagggtaaacacagaggagtttctgcagaatctcgtccaacagcagtatgcacaaacaat
atccgcaaaaaagccattgcagtcagtgggcaactaaaagatgaaggatatcgagaggaa
ctaaaaaggaagtggtttgaaaagccagcagatgagagacgtagggaaaaggagaagaga
cgtgtcattcaagagtcacggaaggaacgtttaaaagaacttgctggcaagcaatcagct
ggctcggcaaaggaattgctaaaacgtaaacatgacgctgaacatgaaagtggtgaaaag
aaaaaggctaaagtgaaaatcactacaaggaatcgtggtgctcttctggcggaagatatt
ggagcagtcaagaaaaatataggttcgtacaaaataccaaaaatcaagcaatgttcctcc
ggcataacgaatgcacacagagagcctcccataactgacaccgcaacgacaactaagccc
aatcattcgacagttgtggatgcttttgctcaggagatgcgcaaattagacaaaatcatt
agccgtcgattctctaccagcagtagcagtaaaacagtatcctctgttgaagaaaacaaa
aatgaaaatacgctagaggaaactaaaataaatgcacctgtgcgtagaataaataaaatt
acatttgcttctatgcagaaaaattttgccgaaactagaaaaaatcaagagttgttacag
aaatttgccattaatcggtcttgcctgatagatgtggtacaccgcaatgcaaacaaagaa
cgtcaaaagaagcgcgtacgctttaatgatacgccaattgtgcatttaattgaacggatt
aatggcgccaataagcgagttgatcgaaaagatattttgccaagtccgacttgtgcagat
cgagctcatatgatacggtcagcgtacaaaatgattgatcagactgcggaaatcatatca
aaaatattaggttggagcaatgaatggctagtaaatcgtaatgcccatgtggatgctgct
agtgatattgtgttgccaatgccaaatcaatttactacattcaatcattataaaagcata
attacaccgttgatgaaattggagttcataagtgtacttgagcgtgaaaaaaatcggtgt
aaatctaagacatttattatctccgccgaacaagtaactccgtctacggaccgctttagg
ataatgggccgctatgctggggtgaataactctggttccaaaagtgaacttgtcgtattg
gaatggggaaagttcacagcattcgcatatatgtcaggaaggcgtttgggctttaatact
actaccgttgtgtacgatgtgcttgcagaaggtttacttttagaagagctgcgtagctgt
ctcaatactccaatgaaagttcgccccatgatagatattgttagagtcgaagttggcgcc
tttaacgcggtattccagttggagcaatcgccattactcaatcaaattcttgatccaagg
gaattatgcaagttaaagccgctcccgaaatgtgatatacaatataacggttgtgatgat
ctaaatgatcgccaaaaggatgttttgttccgtacatataggcgtgccatcgaaccaacg
ccaaacattacattaatacaaggtccgcctggtacgggtaaatcttgtgtaattggcaat
ttggtgcaccaattactctatggtaatgaggttcgcattcttgatcaaaaaatattagta
tgtgcacaaagtaatgcagctgttgatgttatcgctgagaaattatacattatgagtcaa
aaaaaactgccagaggtaatgtttcgattaatacgttttggtttgatggagcgtatcagt
cccaaagttcaccatgccactttaccaaagattatcgaacgtaatcagattagaaagctc
aaaatgtctcacaaaaatcttcaaattgatgataaagtccatataaaggagtacctacga
aatgaaatcgttcaactcgaagctgctattgaagttatgaaactgaaaaacgttaaagga
actgtgcaggaggaagaattgcttgagaaaacgcgacaagttcaattaatgcagaatata
gtgaatggcgttttgcgtccagaggatgagcgtagtctgtataattggcatttgaagcac
gctcatgttgtgtgtactacgctttctagctgcgtgaaattatcacaatatataaattat
tttgatgtttgcatcattgacgaggcaacacagtgtacagaaccatggactctaatgcct
ttaaaatttggtattaatgcgttggtgcttgttggtgatacgcaacagctcccagcgacg
gtactttcaaagaaagcttcagatttcggtctcggcacttcactttttacacgtattcaa
cgctgcatagaatcggtcaatctcaaaaatgtacccaacggattaaatgctcatgaaaaa
acatccgtatcaaacaaaaatgatattattttcagcttacgaacacaataccgcatgcat
cctgaaatttgtaagtggccaaattcttacttttacaaaaaccaactgatagatgatccg
aaaacacataagttcaaaccagtattgaagccattttcaatactgaatctcacgtatacg
caagacgaaaactgtctacgcggtcaaattgttaatgagctggaagcaaagtttgtggca
cgctttgtgaaaactttagatggctacattcctatgaaatataacacttacggtgtgata
acgccttatgcgcagcaacgaggtgcattagaaaaagcgctgcgaacttctggattcaca
aatgtgatggtaaacacaatcgactcttatcaaggcatggaacgtgatgttattattatt
tcaaatgcgcgcactaatggcataggatttttggcaaattatcagcgtttgaatgtggct
ttaactcgtccaaaaaagtgccttatactgtgtggaaacttcaaaaatttagagacagtt
ccggcttggcgtagccttttggcagcagcacgtgaacgcaaactctatcatgagcttagt
gcagattgtatggatgatatgcacagaaacgtgattcctagaataaaaatttcaaaagcg
gcagctgcaacagaagtagcggctgcaacaacgagcaaagagttaactgtggtagccgga
acttcaaaccaagcaagataa
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