Anastrepha ludens (Mexican fruit fly): 128860233
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Entry
128860233 CDS
T10909
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit
KO
K07466
replication factor A1
Organism
alud Anastrepha ludens (Mexican fruit fly)
Pathway
alud03030
DNA replication
alud03420
Nucleotide excision repair
alud03430
Mismatch repair
alud03440
Homologous recombination
alud03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
alud00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
128860233
03420 Nucleotide excision repair
128860233
03430 Mismatch repair
128860233
03440 Homologous recombination
128860233
03460 Fanconi anemia pathway
128860233
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
alud03000
]
128860233
03032 DNA replication proteins [BR:
alud03032
]
128860233
03400 DNA repair and recombination proteins [BR:
alud03400
]
128860233
Transcription factors [BR:
alud03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
128860233
DNA replication proteins [BR:
alud03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
128860233
DNA repair and recombination proteins [BR:
alud03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
128860233
MMR (mismatch excision repair)
128860233
DSBR (double strand breaks repair)
HR (homologous recombination)
128860233
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
OB_MEIOB_N
IBR
Motif
Other DBs
NCBI-GeneID:
128860233
NCBI-ProteinID:
XP_053953592
LinkDB
All DBs
Position
2:160056621..160059313
Genome browser
AA seq
613 aa
AA seq
DB search
MAGIAPLSTGVIERIMRGEEVDKPVLQILGTKKITGGETDRLRLLISDGKFINSYSMLAT
QLNHLHAEGKLAEYTIVQVDKYITSVVNGKDAGKRVLIILELSVLNPGTVVGRKIGTPVS
YTEEAAAQSNKASSSSSNAAVKPLTAANNANRNDKKATLYNNNNSSFNQDLNSGLTSPIS
SLSPYHNKWVIKARVTAKSPMRTWSNAKGEGKLFSMDLMDESGEIRATAFREQADKFYDI
IEVDHVYYISKCQLKPANKQFTSLKNDYEMTLTGETMIQACEDDDNDIPEIKYDLVPISQ
VANLEPRTVVDTIGVCKEVSELQTFTSRTTNKEFKKRELTLVDASNAAVNLTLWGDEAVN
FDGYVQPVILVKGARVTEFNGGKSLSMGNGTVMKINPDISEGHKLRGWFDNGGGEHISNM
ISTRTGGAGGGFSTEWLTFHEARDRNLGAGDKADYFQCKGVVHIVKSQNAFYKACPQADC
NKKVIDENNGHYRCERCNAVFPNFKYRLLINMSVGDWTSNRWVTCFSEVGEQMLKRSAQE
IGDLLENNPPEGEEVLSSINFNSYIFKLRSKMEMFGDMQRNKLTVQSVAPVDYKEYNKYL
INNLKELTGINKN
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atggccggaatagctcctctgtctaccggtgttattgagcgtattatgcggggtgaggaa
gtggataaacctgtcttgcagatactgggcaccaagaaaattaccggcggtgaaacagat
cgtctccgtttattaatttctgatggaaaatttatcaacagttattccatgttggctacc
caactgaaccacttgcatgcagagggcaaacttgccgagtacactatagtccaggtggac
aagtatataacatcagtggtcaatggcaaagatgccggcaaacgggtgttaatcatactg
gagttaagtgtactgaatccggggacagttgtcggtagaaaaattggaactcccgtatcg
tacacggaagaagcagcagcacaaagtaataaagctagttcgagcagcagtaatgctgcc
gtgaaaccgctcactgctgcaaataacgcaaacaggaatgacaaaaaagcaacactatac
aacaacaataacagctcattcaaccaggatttgaattcaggacttactagtccaatatct
agcctgagcccataccacaataaatgggttattaaagcacgcgttacagctaagagcccc
atgcgtacgtggagtaatgcaaagggtgaaggaaagcttttcagcatggatctgatggat
gaatctggagagattcgcgcgaccgctttccgcgagcaggctgacaaattttacgatata
attgaagttgatcatgtttactacatatcgaaatgccaacttaagccagcaaataaacag
tttacctcattgaaaaacgactacgaaatgacgttgactggcgaaacaatgatacaagca
tgcgaggatgatgataatgacataccagaaataaagtatgatttagtacccatatcgcag
gtggcgaatctggaaccacgcacagttgtcgatacaattggagtatgcaaggaagttagt
gaattgcaaacctttacttctcgcacaaccaataaggaatttaaaaaacgtgagctgaca
ctcgtcgatgcgagcaatgcagctgtgaatttgaccttatggggtgatgaagcagttaac
ttcgacggctacgtacaaccggtgattttggtaaaaggtgcacgtgtgacggagttcaat
ggcggcaaaagcttaagcatgggaaatggtactgtaatgaaaattaacccagacatttca
gaaggtcataaattgcgtggctggttcgacaatggtggcggtgaacatatttccaatatg
atttcgaccagaaccggcggtgctggtggcggcttcagcaccgaatggttgacattccac
gaagcacgtgaccgaaatttgggcgcgggcgataaggcggattactttcaatgcaaaggt
gttgttcatattgtcaagagtcaaaatgcattctacaaggcttgcccgcaggcggactgc
aataagaaagtcattgacgagaacaatgggcattatcgttgcgagcgttgtaatgctgtt
ttccccaatttcaaatataggctactaattaatatgagcgttggcgattggacctcaaac
cgctgggttacttgcttcagcgaagtgggtgagcagatgctgaagcgttcggcacaggag
attggtgatcttttagaaaacaacccacccgaaggggaagaggtgctctcgtcgatcaac
ttcaattcatacatttttaaattgcgcagcaaaatggaaatgtttggtgatatgcaacgt
aataaattgactgtacaatcagttgctccagtagactacaaggagtataacaaatatttg
ataaacaacctgaaggagttgaccggtattaataaaaattaa
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