Anastrepha ludens (Mexican fruit fly): 128860495
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Entry
128860495 CDS
T10909
Name
(RefSeq) ATP-dependent RNA helicase Ddx1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
alud Anastrepha ludens (Mexican fruit fly)
Brite
KEGG Orthology (KO) [BR:
alud00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
alud03041
]
128860495
03016 Transfer RNA biogenesis [BR:
alud03016
]
128860495
Enzymes [BR:
alud01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
128860495
Spliceosome [BR:
alud03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
128860495
Transfer RNA biogenesis [BR:
alud03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
128860495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
128860495
NCBI-ProteinID:
XP_053954044
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All DBs
Position
4:complement(106559511..106562317)
Genome browser
AA seq
727 aa
AA seq
DB search
MTAFEEFGVLPEIGKAIDDMEWTLPTDVQAEAIPLILGGGDVLMAAETGSGKTGAFCLPI
LQTVWETLRDLDEGKVSKTSGAGGSIAPWTMSFFDRGSALAVTPDGMRCQSREFKEWHGC
RATTGVRGKGKFFFEATVTDEGLCRVGWSTEQANLDLGTCRNGYGFGGTGKKSNNRQFDD
YGEAFGKNDVIGCYVDLQRLEISFAKNGKPLGLAFRIPENQRNETFYPAVVLKNAEMLFN
FGKTDFKYPPKDGFIAVCQAGSERSKSNPLASPTTNAAANKPAPNAPQAIIIEPSRELAE
QTYNQIEKFRVHLSNPDVRSLLLIGGVKLEQQKSSLQQGVHIVVGTPGRLEEMISSGFVQ
LTHCRFFVLDEADALLKQGYTDLIDRLHKQIPKMTSDGRRLQMVVCSATLHAFEVKKMAD
RLMHFPTWVDLKGEDAVPETVHHVVCMVDPQKDITWHNLRQHIRTDGVHARDNVHPQNHT
PETLSEAIKILKGEYCIAAIDQHKMDRAIIFCRTKVDCDNLENYLKSRGGQRYSCVCLHG
DRRPQERKQNLEMFKREQVKFLICTDVAARGLDITGLPFMINVTLPDEKSNYVHRIGRVG
RAERMGLAISLVASVPEKVWYHGEWCPTRGRNCQNTNLTDVRGCCIWYNEMNLLGDIEDH
LNITIQQVDKSLAVPLNDFDGKVIYGQKNLNTGTGYKDHVQQLGPVVRKLTELELQSQSL
FLKRLKF
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgactgcttttgaagaatttggtgtgttgcccgaaatcggtaaggcgattgacgacatg
gagtggactctgccaactgatgtacaagccgaagctataccacttatccttggtgggggc
gacgtacttatggcagcggaaactggttctggcaaaactggagctttttgtttacccatt
ttgcaaactgtttgggaaacgttacgcgatcttgatgaaggaaaagtaagtaagacttct
ggtgccggtggcagtattgcaccttggacgatgtcgttctttgaccgaggatcagcactt
gctgtcacaccggatggaatgcgttgccagtcacgtgaattcaaagaatggcacggttgt
cgtgctacgaccggtgtacgtggcaaaggtaagttcttctttgaggccaccgtcacggac
gaaggactttgtcgcgtaggttggtccacggaacaagccaatctagatcttggtacctgt
cgtaatggctatggttttggtggtaccggaaaaaagtccaacaatcgccaatttgatgat
tatggtgaggcgtttgggaaaaatgacgtcattggttgctatgtcgatctacagcgcttg
gaaatatcctttgctaagaacggcaaaccattaggtttggcatttcgaatacccgaaaat
caacgcaatgaaactttttatccagctgttgtgttaaaaaatgctgaaatgctgttcaat
ttcggtaagaccgattttaagtatccacctaaagatggttttatcgctgtatgtcaagcc
ggctcagagcgttcaaaatctaatccgcttgctagccctacaacaaatgctgcagctaac
aagccagcaccaaatgcaccccaagcaattattatagaacccagccgcgaacttgcggag
caaacctataatcaaattgaaaagtttcgagtacatttgagtaaccctgatgtacgttca
cttttgctaattggaggcgttaagctagagcagcaaaaaagttctctacaacaaggagtt
catattgtggtgggtacaccaggtcgtctggaagagatgattagcagtggatttgtgcaa
ttaacacactgcagattttttgtactagacgaagctgatgccttactcaagcaaggctat
actgatttgatcgatcgacttcacaagcaaataccaaaaatgacttccgatggtcgacgt
ttacagatggttgtttgttctgctaccctacatgcattcgaagtgaaaaagatggccgat
cgcctgatgcacttccccacctgggtagatcttaaaggcgaagatgcagtgccagaaact
gttcatcatgtcgtttgcatggttgacccacagaaggatataacctggcacaaccttcga
caacacatacgcactgatggtgtccacgcgcgagataatgtgcatccgcagaatcacaca
cctgaaacattatccgaggccattaaaattcttaaaggcgaatattgtatagctgcgatt
gatcaacacaaaatggatcgtgccattattttctgccgcactaaggtagattgtgacaat
ttggaaaattacctaaagtcgcgcggtggccaacgatattcgtgtgtttgtctacatgga
gatcggaggcctcaggagcgcaaacaaaatttggaaatgtttaagcgtgaacaagtaaaa
tttctcatttgtactgatgtagctgcgagaggtttggatataactggtctccctttcatg
ataaacgtaactttgcccgatgagaagtcaaattatgtacatcgaatcggtcgtgttggt
cgcgcagagcgaatgggcttggccattagcttagtagcttccgtgccagaaaaggtttgg
tatcatggggagtggtgcccaacacgcggccgaaattgccaaaatacaaacctaactgac
gtgcgtggatgttgtatttggtacaatgaaatgaatttgttaggtgatatagaggatcat
ctcaacattaccattcagcaagttgataagtctttggcagtgccccttaatgatttcgac
ggtaaagttatttatggccaaaagaatttaaatactggcactggatataaggatcatgtg
caacagttggggccagttgtgcgaaagttaaccgaacttgaattgcagtcacaatcttta
ttcttgaaacgcttgaaattttaa
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