Anastrepha ludens (Mexican fruit fly): 128860952
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Entry
128860952 CDS
T10909
Name
(RefSeq) exosome complex component MTR3
KO
K12587
exosome complex component MTR3
Organism
alud Anastrepha ludens (Mexican fruit fly)
Pathway
alud03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
alud00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
128860952
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
alud03019
]
128860952
Messenger RNA biogenesis [BR:
alud03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
128860952
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PvlArgDC
Motif
Other DBs
NCBI-GeneID:
128860952
NCBI-ProteinID:
XP_053954744
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Position
4:122955589..122956844
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AA seq
292 aa
AA seq
DB search
MPPPSASRKFMYPEQSVPYSLYINRENPDEVFAKLDKPAKLQLEERPTFLKVGALATVKG
SAYMEYGKTKVMASIEPPRELSKQTRKIGTLGIVTCTLKYAPFAVMDPTCISRKETSMAL
ALKKALEPVICRHEFPYFQLEIKVIILDDDGCALSTAINCCGAALVDAGIATYDLITAST
VCKYKDVEFVNPNAVIERLVSTISDTDSDEHGIVVTASLAAVDQITECFQKGYLKPETVK
QLTEHTLTINERILDTVRYVLFKKVKQQLEREKVVNDVIESENVEENKTFSE
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgccaccaccatctgccagtcgaaagtttatgtatcctgaacagtcggtaccgtattcc
ttatatataaatcgagaaaatcctgatgaggtgttcgccaaacttgataaaccggcaaag
ttacaactagaggaaagaccaacattcttaaaagttggtgctctagcaacggtaaagggt
tccgcctacatggaatatggcaaaacgaaggtaatggcatccattgaaccaccacgtgaa
ttgagcaagcagactagaaaaattggtacgcttggaatagttacttgtacactgaaatat
gcgccatttgccgtaatggatccaacatgtatatcgagaaaagagacgtctatggccttg
gcgctcaaaaaagctctggaacctgtcatttgccgacatgaatttccttactttcaactg
gaaattaaagtaatcatattggatgatgatggttgtgcgttaagtacagcaattaattgc
tgtggtgcagctttggtagatgctggtattgccacctatgatctaataacagcctcaacg
gtatgcaaatacaaggatgtagaattcgtaaatccaaatgctgtaattgaacgtttagtt
tccaccataagcgacaccgatagcgatgaacatggtatagttgttactgctagtctggct
gcagttgatcaaatcacggaatgcttccaaaagggatacctcaagccagaaacagttaaa
cagctaacggaacatacattgactattaatgaacgtattttggatacagtgcgttacgta
ttatttaagaaagtcaaacaacagttggaaagggagaaagtcgtaaacgatgttattgaa
tctgaaaatgttgaagagaataaaactttttctgagtaa
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