Anastrepha ludens (Mexican fruit fly): 128860980
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Entry
128860980 CDS
T10909
Name
(RefSeq) general transcription and DNA repair factor IIH helicase subunit XPB
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
alud Anastrepha ludens (Mexican fruit fly)
Pathway
alud03022
Basal transcription factors
alud03420
Nucleotide excision repair
Brite
Enzymes [BR:
alud01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
128860980
Transcription machinery [BR:
alud03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
128860980
DNA repair and recombination proteins [BR:
alud03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
128860980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
128860980
NCBI-ProteinID:
XP_053954780
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Position
4:complement(2423163..2426043)
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AA seq
813 aa
AA seq
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MGPPKKSRKDRFTGDKFGKKRRAEDEAFAQLVEDGDSVASDGAAELDGVPVAASKNVETN
DDGIMTDEYGAKDYRAQMELKSDHGNRPLWVAPNGHIFLESFSPVYKHAHDFLIAISEPV
CRPEHIHEYKLTAYSLYAAVSVGLQTHDIIEYLKRLSKTSIPEGIIEFIKLCTLSYGKVK
LVLKHNRYFIESPHPEILQKLLKDPVIQQCRLKREEGDGFIQGTLEGKAITQFGTKLPTG
TDKTSTGLNTASDPSSGSATGAVVSNNPDGTTAVPEDITNFYDKIDNEEEDEDEANLKTV
SFEVNQEKIEVIQKRCIEIEHPLLAEYDFRNDTHNPDINIDLKPAAVLRPYQEKSLRKMF
GNGRARSGVIVLPCGAGKSLVGVTACCTVRKRALVLCNSGVSVEQWKQQFKMWSTADDSM
ICRFTSEAKDKPMGCGILVTTYSMITHTQKRSWEAEQTMRWLQEQEWGIMVLDEVHTIPA
KMFRRVLTIVQSHCKLGLTATLLREDDKIADLNFLIGPKLYEANWLELQKKGYIARVQCA
EVWCPMSPEFYREYLTTKTSKKMLLYVMNPSKFRSCQFLIKYHEKRGDKTIVFSDNVFAL
KHYAIKMNKPFIYGPTSQNERIQILQNFKFNQKVNTIFVSKVADTSFDLPEANVLIQISS
HGGSRRQEAQRLGRILRAKKGAIAEEYNAFFYTLVSQDTMEMSYSRKRQRFLVNQGYSYK
VITHLSGMDTDSDLMYKTREEQSQLLQQVLSASDLDCEDEKVPGEPGYRPSGAAASKRAG
GLSSMSGGDDAIYYEQRRRNAGTVHPLFKKFRA
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atgggtccgccgaagaaatccaggaaagatcgcttcacgggagataaatttggaaagaaa
cgtcgtgcagaagatgaagcatttgcgcagctagtagaagatggagattccgtcgcttct
gatggtgccgctgagttggatggggtgcccgtagctgcatctaaaaatgtggaaactaac
gatgacggcattatgacagacgaatatggggccaaggattaccgcgcccaaatggagctt
aagtctgatcatgggaatcgtcccttgtgggttgccccaaatggacatattttcttggaa
tccttttctcctgtttataaacatgcacatgatttcttaattgctatatcggagcctgta
tgtcgcccagaacacatacacgaatataagttaacagcttacagtctctatgcagccgtt
tctgtcggattacagacacacgatatcattgaatatctcaaacgtttaagtaaaacttca
atacccgagggaattattgaatttattaagctatgcacattgtcctatggaaaagtaaaa
ttggtgctaaaacataacaggtattttattgaatcaccacatcctgaaatacttcaaaaa
cttcttaaggatcctgtgattcagcaatgtcgcttgaaacgtgaggaaggagatggtttc
attcagggcacattagaaggcaaagcaattactcaatttggaacaaaattaccaactggt
actgacaaaacatccacaggattgaatactgctagtgacccatcgtctgggtctgcaaca
ggagccgtagtatccaacaacccagatggcaccacggcagtcccagaagatataacaaac
ttctatgataaaatcgacaacgaagaggaagatgaggacgaagcaaacttaaaaacagta
tcattcgaagtgaatcaagaaaaaattgaggttatacaaaaacgttgcattgaaatcgaa
catccgttactggcggaatatgactttcgaaatgatactcataatccggacataaatatt
gatttgaaacccgctgcggttcttcggccttaccaggaaaagagtttgcgaaaaatgttt
ggcaatggtcgcgcccgatccggagtgattgttttgccttgtggagctggcaaatcactt
gttggtgtgacagcctgttgtaccgtacgaaaacgcgctctagtgctttgcaacagtgga
gtttctgtagagcaatggaaacagcagttcaaaatgtggtctacggcggacgatagcatg
atttgtcggtttacgtctgaagccaaagataagcccatgggatgtggtatcctcgttaca
acttattcaatgattacgcatactcaaaagcgatcttgggaggctgagcaaactatgcgc
tggttgcaggaacaggaatggggcataatggtgctggatgaagtacacaccatacccgct
aaaatgtttagacgcgtcttgactattgtacagtcccattgtaaattaggtttgacagcc
accctactgcgcgaagatgataaaatcgcggatctgaattttcttattgggccgaagctt
tatgaagcgaattggctggaattgcaaaagaagggatatattgcaagggtacaatgtgct
gaggtatggtgtcctatgtctccagaattttaccgcgaatatcttactacaaaaacatca
aagaagatgcttttgtatgtgatgaatccatccaaatttcgcagttgccagtttctaata
aaatatcatgagaagcgaggtgacaaaactattgttttctcggataacgttttcgctctc
aaacattatgctataaagatgaataaaccgttcatttacggaccaacttcgcaaaatgag
agaattcagattctacagaactttaaattcaatcaaaaggtcaacacaatatttgtgtcc
aaagtcgcagataccagttttgatttgcctgaggcaaacgtactcattcagatatcctca
catggcgggtctcgacgccaagaagctcagcgtttaggtcgcatattgcgagctaaaaag
ggtgctattgctgaagaatacaatgcattcttttatactctcgtttcacaagatactatg
gaaatgagttattcacgcaaacgccaaaggtttttggttaatcaaggttatagctataaa
gtaattacccacttaagtggcatggacaccgattctgatttgatgtacaaaactcgcgaa
gagcaatcacagctcttgcagcaagtcctctcggcctcggatttggactgcgaagatgaa
aaggtaccgggtgagccgggctatcgaccaagtggtgcagcagcttctaaacgtgctggc
ggcctcagctcaatgtctggcggcgatgatgctatttactatgagcagcgccgtcgaaat
gcgggcactgtacatcctttatttaagaaatttcgagcataa
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