Anastrepha ludens (Mexican fruit fly): 128861246
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Entry
128861246 CDS
T10909
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm2
KO
K12621
U6 snRNA-associated Sm-like protein LSm2
Organism
alud Anastrepha ludens (Mexican fruit fly)
Pathway
alud03018
RNA degradation
alud03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
alud00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128861246
09123 Folding, sorting and degradation
03018 RNA degradation
128861246
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
alud03019
]
128861246
03041 Spliceosome [BR:
alud03041
]
128861246
Messenger RNA biogenesis [BR:
alud03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
128861246
mRNA degradation factors
5'-3' decay
Lsm complex
128861246
Spliceosome [BR:
alud03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
128861246
Complex C
U2 snRNP components
128861246
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
128861246
NCBI-ProteinID:
XP_053955199
LinkDB
All DBs
Position
4:2608339..2608909
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AA seq
95 aa
AA seq
DB search
MLFYSFFKSLVGKDVVVELKNDLSICGTLHSVDQYLNIKLTDINVTDPDKYPHMLSVKNC
FIRGSVVRYVQLPGDEVDTQLLQDAARKEAVVSTR
NT seq
288 nt
NT seq
+upstream
nt +downstream
nt
atgctgttttactcatttttcaagtcccttgtggggaaagacgttgtagtagagctaaaa
aatgacttgagcatatgcggaacattacattctgtggatcagtacttgaatattaaactt
accgatattaatgttacggaccctgacaaatatccgcacatgttatctgtgaaaaattgt
ttcattagaggctctgttgttcgatatgttcaattgccaggtgacgaggtagacacacaa
cttctgcaggatgcagcacggaaagaagctgtagttagtacaagataa
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