Anastrepha ludens (Mexican fruit fly): 128861376
Help
Entry
128861376 CDS
T10909
Name
(RefSeq) histone deacetylase HDAC1
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
alud Anastrepha ludens (Mexican fruit fly)
Pathway
alud03082
ATP-dependent chromatin remodeling
alud03083
Polycomb repressive complex
alud04213
Longevity regulating pathway - multiple species
alud04330
Notch signaling pathway
alud04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
alud00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
128861376
03083 Polycomb repressive complex
128861376
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
128861376
04350 TGF-beta signaling pathway
128861376
09150 Organismal Systems
09149 Aging
04213 Longevity regulating pathway - multiple species
128861376
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
alud03036
]
128861376
Enzymes [BR:
alud01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
128861376
Chromosome and associated proteins [BR:
alud03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
128861376
HDAC complexes
Sin3A-HDAC complex
128861376
BRAF-HDAC complex
128861376
REST complex
128861376
SHIP complex
128861376
MiDAC complex
128861376
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
128861376
Heterochromatin formation proteins
Other heterochromatin formation proteins
128861376
Chromatin remodeling factors
NuRD complex
128861376
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
128861376
NCBI-ProteinID:
XP_053955461
LinkDB
All DBs
Position
4:complement(28676343..28679358)
Genome browser
AA seq
484 aa
AA seq
DB search
MQAHSKKRVCYYYDSDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAD
EMTKFHSDEYVRFLRSIRPDNMSEYNKQMQRFNVGEDCPVFDGLYEFCQLSAGGSVAAAV
KLNKQASEICINWGGGLHHAKKSEASGFCYVNDIVLGILELLKYHQRVLYIDIDVHHGDG
VEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNIPLRDGMDDEAYESIFV
PIISKVMETFQPAAVVLQCGADSLTGDRLGCFNLTVKGHGKCVEFVKKYNLPFLMVGGGG
YTIRNVSRCWTYETSVALGVEIANELPYNDYFEYFGPDFKLHISPSNMTNQNTSEYLEKI
KNRLFENLRMLPHAPGVQIQAIPEDAINDESEDEDKVNKDERIPQGDKDKRIDPDNEFSD
SEDEGEGGRRDNRSYKGQRKRPRLEKDTKTVIENAEIKDEKDKMDTNESEETGKGEDIKK
ENNI
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgcaagcacacagtaaaaagcgtgtttgctattattatgatagtgatattgggaattac
tactatgggcagggacacccaatgaagcctcatcgcatacgcatgacccataatttgctt
cttaactatggtctataccgaaaaatggaaatttaccggccgcataaagctactgccgat
gagatgaccaaatttcattcagatgagtacgtacgctttttgcgctctatacgtccggac
aatatgtcagaatacaacaaacaaatgcagcgattcaatgtgggggaagattgcccggtg
tttgatggactctatgagttttgccaattatctgctggcggttcggtagccgctgccgta
aaactaaataaacaagcctctgagatttgtataaattggggtgggggccttcatcacgct
aagaagtctgaagcttcaggtttctgttacgtcaatgacattgtgctgggtattttggaa
cttctgaaatatcaccagcgcgtattatatattgatatagatgtacatcatggcgacggt
gtagaggaggcgttttatactaccgaccgtgtgatgacagtaagtttccacaaatacggc
gagtatttccctggtacaggtgacttacgtgatatcggcgctggcaaaggcaaatattac
gctgtaaatattcccctgcgcgatggtatggacgatgaagcgtacgaatcaatatttgtg
ccaattatctcaaaggtgatggaaacattccagccggcagcggtggtacttcaatgcggt
gcagattcattgacgggcgatcgtctcggatgcttcaatttaactgttaagggtcacgga
aaatgcgtcgaatttgtcaagaaatacaacctgcccttcttaatggttggaggtggagga
tacacgattcgtaatgtatcgagatgttggacatatgaaacgtcagttgccctcggtgtt
gaaattgcaaatgaactgccatacaatgattactttgaatattttggtcctgatttcaag
ttacacatcagcccgagtaatatgacgaatcaaaatacttcagagtacttggaaaagatc
aaaaatagactctttgaaaatctgcgtatgctgccccatgctcccggtgtacaaattcaa
gcaatacccgaggatgcaattaatgatgaatcggaagatgaagacaaggttaacaaggac
gaaagaataccacaaggcgataaagataagcgtattgatcctgataatgaattctcggat
tcggaagatgaaggcgaagggggccgtcgtgataatcggtcatacaaaggccaacgcaag
cggccgcgactagaaaaagataccaaaacagtaatagagaacgccgagatcaaggatgaa
aaggataagatggatactaatgaaagtgaggagactggtaaaggtgaagacataaagaaa
gaaaacaacatatga
DBGET
integrated database retrieval system
