Anastrepha ludens (Mexican fruit fly): 128862292
Help
Entry
128862292 CDS
T10909
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm5
KO
K12624
U6 snRNA-associated Sm-like protein LSm5
Organism
alud Anastrepha ludens (Mexican fruit fly)
Pathway
alud03018
RNA degradation
alud03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
alud00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128862292
09123 Folding, sorting and degradation
03018 RNA degradation
128862292
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
alud03019
]
128862292
03041 Spliceosome [BR:
alud03041
]
128862292
Messenger RNA biogenesis [BR:
alud03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
128862292
mRNA degradation factors
5'-3' decay
Lsm complex
128862292
Spliceosome [BR:
alud03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
128862292
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
LSM14
Motif
Other DBs
NCBI-GeneID:
128862292
NCBI-ProteinID:
XP_053956812
LinkDB
All DBs
Position
4:51708665..51709287
Genome browser
AA seq
91 aa
AA seq
DB search
MTAVPPPSNVSTLLPLELVDKCIGSRIHIIMKNDKEMVGTLLGFDDFVNMLLNDVTEYEN
TPEGRRITKLDQILLNGNNITMLVPGGDIPE
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgactgcagtgcctccgccttcgaatgtatccacattgttaccactcgaattggtggac
aaatgcataggctcccgcatacacattatcatgaagaatgataaagagatggttggtacc
ttgttggggtttgacgatttcgtgaatatgttgttaaatgatgtaacggaatatgaaaat
acgccggaaggtcgtcgtataaccaaactcgatcaaatacttctcaatggcaataatata
acaatgttagtccctggcggcgatataccggagtga
DBGET
integrated database retrieval system
