Anastrepha ludens (Mexican fruit fly): 128862411
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Entry
128862411 CDS
T10909
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
alud Anastrepha ludens (Mexican fruit fly)
Pathway
alud03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
alud00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
128862411
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
alud03019
]
128862411
03012 Translation factors [BR:
alud03012
]
128862411
Enzymes [BR:
alud01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
128862411
Messenger RNA biogenesis [BR:
alud03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
128862411
Translation factors [BR:
alud03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
128862411
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
DEAD
Helicase_C
HA2_C
HA2_N
nSTAND3
AAA_19
AAA_22
NPHP3_N
ResIII
SRP54
AAA_14
Rad17
ABC_tran
PhoH
FtsK_SpoIIIE
T2SSE
AAA_11
NB-ARC
ATPase
Motif
Other DBs
NCBI-GeneID:
128862411
NCBI-ProteinID:
XP_053956982
LinkDB
All DBs
Position
4:55915659..55934601
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AA seq
937 aa
AA seq
DB search
MDRNDRERIRHPPGLRGRDIGLFYRNLSKRKRPRPDEPTIRLGPCVSVPQAVLARVEEKL
YRFAQSCEDENVLKDFEAQFRHLLFADFEDFIVTSKSSSYELLDNEFQNQRYKSDALLKE
RDPQFQRRYEQRMNLPAMKQHDRILEAIKENQVLLIVGSTGCGKTTQVPQLILDDYIFNN
RGSQCHVVCTQPRRISAVTVAERVAYERCEHLGTSVGYQIRLESEMPRDIGSILYCTTGV
LLQKLQSDPLMNAVSIVIIDEIHERSVETDLLMALLKIILPHRPNLKIILMSATVSEEEF
SAYFNNCYTINIEGTMFPVKVNYLEDIIQETGFTRFHNNPHECTKNKARHRSKQSNRQST
NNLEYSAMIEPYLRQIKDKYDNQVLQSLRCTDSEGCENLQFLEHLIFYICDTKPPGAILV
FLPGYDNISKLNSVLLNPTLPIGQRYARKIQVYPLHSMMPTVFQKNVFQSPPPGIRKVIL
STTVAETSVTIDDVVYVINSGRMKTNNYNVEANLQTLEEAWVTKANTKQRKGRAGRVQPG
ICYNLFSRAREKTMLDQIVPEILRSKLESTILNMKMLHVKDVGYFFNTLISPPNQQAVTN
GINLLKRINALDVEGTLTPLGMHLARLPVDPPIGKMLVMGALFRCLDPITSVAAGLSFKS
PFYTPLGKEREVDRVKRHLSANQRSDHLLIDNVVLTYRESLEDSSERDFCYKNFLNIGIL
QQLEDMKRQFASLLRASSFTDSSNCNAQSSNENSKNITLLRAIIAAGLYPNMAFLSKVRR
TKNHVNAIHHLCTPEERRVNFHPSSVNSHEASFDSHYFVYFQKQKSSSVYILDATMVFPM
ALIIFGDGVETGYTEKNIFYISVARTYYFKCDPATAKVVLELRKRLEWLMQKRALNPSPI
LPNSSEDYIIKAIQILLSLDDVYDYSDQYLSSDEEQQ
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atggatcgcaacgatagagaaagaatacgtcatccgcctggattacgtggtcgtgacatc
ggactattttaccgcaacttatcaaagcgaaagcgtccaagaccagacgagccaacaatt
agattgggaccttgcgtgagtgtcccgcaagctgtgctggcaagggttgaagagaaactc
tatcgtttcgcacaaagctgcgaagatgagaacgtgttgaaagactttgaagcacaattt
cgacatttgttattcgccgattttgaggatttcattgttacttcaaagtcatccagttat
gagctgctggataatgaatttcaaaatcaacgttacaaatccgatgctttgttaaaggaa
cgtgatccacagtttcagagacgatacgagcaacgtatgaatttgccggcaatgaagcaa
catgatcgtatattagaagcgattaaagaaaatcaagtattactaattgttggtagtacg
ggttgtggtaagacaacacaagtgccacagctcattttggatgattacatcttcaataat
cgtggctcacagtgtcatgtagtatgtacacaaccgcgtcgtatttcggcagtaacggtt
gctgagcgtgtagcttatgaaaggtgtgagcatttgggtacatcggtgggctatcaaatt
cgtttggaaagtgaaatgccgcgagatattgggtccattttgtattgcaccacaggcgtg
cttctgcaaaagttgcaatcagatccattgatgaatgccgtaagcattgttatcatagac
gagatacacgaacgcagtgtagagactgatttgctaatggctttattgaaaatcatattg
ccacatcgaccaaatctgaaaattattttaatgagtgctactgtgtcggaggaagaattt
agcgcttatttcaacaattgttatacgataaacattgaaggcacaatgtttccggttaag
gtgaactacctggaagatattatacaagagaccggtttcacacgttttcataataatccg
cacgagtgcaccaaaaataaggcacgacatcgctccaagcaatctaaccgccagagcact
aataatttggagtattcagcaatgatcgagccatatctgcggcagattaaagacaagtac
gataatcaggtactgcagtcattacgttgtaccgactcggaaggttgcgaaaatctacaa
tttttagagcatttaattttctatatttgtgatacaaagccaccgggggcgattttggtt
ttcttgccgggttacgataacatttctaaacttaattctgtactactaaatcccacttta
ccgattggccagcgttacgcacgtaagatacaagtgtatccattacattcaatgatgcct
accgtgtttcaaaagaatgtttttcaatcaccgccacctggcattcgtaaggttatactc
tcaactacagtagcagaaacttcggtcacaattgatgatgttgtctatgtgatcaatagt
ggacgcatgaagacgaataattataatgtggaagccaatttgcaaacgcttgaagaagct
tgggttacaaaagccaatacgaaacaacgcaaaggacgtgctggtcgtgtgcaacctggt
atctgttataatctctttagtcgcgctcgtgaaaagacaatgctcgaccaaatagtgccc
gaaatattgcgtagtaaactggaatctaccatattaaatatgaaaatgttgcacgtgaaa
gatgtaggctatttttttaatacacttatttcgccacctaaccaacaagctgtcacaaat
ggcataaatttactaaaacgtatcaatgcgctagacgtggaaggtacattaacgcctttg
ggcatgcatttggcacgtttgccggttgatccgccaattggtaaaatgcttgtgatgggc
gcactctttcgttgtttggatcctatcacttcagtggcagcgggattgtcatttaagtcg
ccattttatacgccactcggcaaagagagagaagttgatcgtgtcaagcgtcatctctcg
gccaatcagagaagtgatcatttgttgatcgacaatgttgtactcacttatcgtgaatcg
cttgaggatagttctgagcgagatttttgctacaaaaactttttaaatattggcatacta
cagcagttggaggatatgaaacgccaatttgctagtttgcttcgcgcatccagctttaca
gattcaagtaattgcaatgcccaatcttctaatgagaattccaagaatattacattgtta
cgcgctataattgccgctggtctttatccaaatatggcatttttgagtaaagtacgtcgt
acaaagaatcacgtcaatgccatacatcatctttgcacaccagaggaacgacgagtcaat
ttccatccatcctctgtgaatagccatgaagcttcatttgattctcactattttgtctat
tttcaaaaacagaagtcatcgagtgtttatattttagatgctaccatggtttttccgatg
gccctaatcatatttggcgatggcgttgaaacaggttatactgaaaaaaatatattttac
atttcagtggctcgcacgtactactttaaatgcgatcccgccactgccaaagttgttttg
gaactgcgcaaacgtttggaatggcttatgcaaaagcgtgcactaaatccatcaccaatc
ctgccaaatagcagcgaagattacatcatcaaagcaattcaaatactcttatcattggat
gatgtgtacgattatagcgatcaatatctctcgtctgatgaagagcaacaataa
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