Anastrepha ludens (Mexican fruit fly): 128862818
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Entry
128862818 CDS
T10909
Name
(RefSeq) CCR4-NOT transcription complex subunit 3 isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
alud Anastrepha ludens (Mexican fruit fly)
Pathway
alud03018
RNA degradation
Brite
Messenger RNA biogenesis [BR:
alud03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
128862818
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
128862818
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
128862818
NCBI-ProteinID:
XP_053957549
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Position
5:complement(17006554..17016721)
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AA seq
983 aa
AA seq
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MAATRKLQGEIDRCLKKVAEGVETFEDIWKKVHNATNSNQKEKYEADLKKEIKKLQRLRD
QIKSWIASGEIKDKSQLLENRRLIETQMERFKIVERETKTKAYSKEGLGAAQKMDPAQRI
KDETRNWLTSSISSLQLQIDQYESEIESLLAAKKKRLDRDKQDRMDEFRVKLDRNKFHVM
KLETLLRLLDNDGVEAEQVNKIKDDVEYYIESSQEPNFEENEFLYDDIIGLDDVELSGTG
VSLGIPSSATTDSNNSNETSGSPSSITSGGSPVQSPPPVAGSQQQVQQLCAAAATTASTA
TLTATSNASTAQQQQQQQSNISNNMNYAAEAAAAAAATASANSNIDTAASDKRNKNESNS
SSKVKQPVKPTAVRAANSSGKSSSGSISETSSNKAISSTPNKNHQQQQQQQQPTAAAVVA
AAMAGQTTPSSTTTTANSIGGVPPTLAATVAAAAAMAAGHSPALQQHAPAPSLNTTNVAT
VVGGATTVAATVATNNGSSNSNNIQGQSVIQATPTIAFAAVAKNNTSHLENGPVHPATSY
AMAAPTVASIVGSNVQHQQQQQQQQQQQQLSNLQTNSSHLQNAHSNTSNSNPSNSLANAV
QQGSAAVAAAAAVAAGVVVNNVGSNNLANCISPNGISQVIGTPQQQQQQVIGVANNSTRA
SPGLLSPKHMNGLPVSTANINNNNNAVDAISLKTMAQEAINRSVIDTNSLTQGPGQQIDN
RQQQQAQQSQQVLQHFSTETTANQQQQQQLAGGLAAAAVAFAAAAAATNGPTTAGAGPVG
SAVPSGLAGLTNAAVGQPGASNSGVNAPVGSKPHQQPTNEAHITPLLGVAPLGTLPLHKD
HQLQFKMMEAAYYHLPTPADSERLNIYLPRTPVPTPLHYPQQQLPLYDTVEFYQRLSTET
LFFVFYYMEGSKAQYLAAKALKKQSWRFHTKYMMWFQRHEEPKIINDDYEQGTYIYFDYE
KWSQRKKEGFTFEYKYLEDKELN
NT seq
2952 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgacgagaaagttgcaaggtgaaatagacagatgtctgaaaaaggttgcggaa
ggagtggaaacattcgaggatatatggaaaaaagtgcataatgctacaaacagtaatcag
aaggaaaaatatgaagcagatcttaaaaaggaaatcaaaaagctacaaaggcttcgggat
caaattaaatcatggattgcatccggggagatcaaagataaaagccagctgctggaaaat
aggcgtctcattgaaacacaaatggaacgtttcaagatcgtagaacgtgaaacgaaaacg
aaagcgtactcgaaagaaggtcttggcgctgcacaaaaaatggatccagctcaacgtatt
aaagatgagactcgtaactggctaacatcgtcaataagttcgttgcaattgcaaatagat
caatacgaaagtgagattgaatcgttattggcggctaaaaagaaacgccttgatcgcgac
aaacaggatcgaatggatgagtttcgtgttaagttggatcgtaataaattccatgttatg
aagctggaaacactgttaagattactcgacaatgatggtgttgaagcggaacaggtgaat
aaaatcaaggatgatgttgaatattacattgaatcctcacaagagccgaatttcgaagag
aatgaatttctttatgatgacattattggcctggacgatgttgaattatctggcacaggt
gtttcacttggtattccatcatcagccactacagacagcaacaacagcaacgagacgagc
ggttcgccgagcagcataacatcgggtggcagtcctgtgcaatcaccaccaccagtagcg
ggctcacagcaacaagtacaacaactgtgtgcggcggcagcgacgacagcatcaactgcg
acgttaacagctacaagtaatgcgtcgacggcgcaacaacaacagcagcagcaaagtaat
atcagcaacaatatgaattatgcagctgaggcagcagcggcggcggcagcgacagcgtcg
gcgaacagtaatatagacacggcagccagcgataaaaggaacaaaaatgagagtaattct
agtagcaaagtaaaacaacctgttaaacctacggcagtacgcgcagccaatagcagcgga
aaatcttctagcggttcgatatcagaaacgtcttcaaataaagcgattagttcgacaccc
aacaagaatcatcaacagcagcagcagcaacaacaacctacggctgcagcagtggttgca
gcagccatggctggtcaaaccacgccttcatcaacaacaacaacggcaaatagcataggt
ggtgttccgcccacattagcagccactgttgcagcagccgcagcaatggctgctggccac
agtcctgcgttgcaacagcatgcgccggcgcctagtttaaacacaacaaacgtagcgaca
gtagtagggggtgcgactacggtagccgccactgttgcgactaataacggtagcagcaac
agtaacaacattcaaggccaatctgtgattcaagcgacgccaacgattgcatttgcggct
gtagcgaaaaataacacatcacatcttgaaaatggacctgtgcacccggcgacatcatat
gcgatggcggctccaacggtagcgtccatagtaggctccaatgtgcagcaccagcaacaa
caacagcagcagcaacaacagcaacagttatccaatcttcaaacgaattcctcacattta
caaaacgcgcatagcaacacttccaacagcaacccatccaatagtttagcgaacgcggtt
caacaaggaagtgcagctgtcgcagcagcagccgccgtcgcagccggagtagtggtgaat
aacgttggcagcaataatctggcaaattgcatttccccgaatggtatctcgcaagtaatt
ggaacaccgcaacaacagcaacaacaagttattggtgtagccaataatagcacacgcgct
tcaccgggcttactttcgccgaagcatatgaatggcttgcctgtgtctacggccaacatt
aacaacaacaacaacgctgtggatgcaatttcattaaagacgatggctcaagaagctatt
aaccgatcggtaatcgacacaaattcattgacgcaaggacctggtcaacaaattgacaat
agacagcagcagcaagcgcagcaatcacaacaggtcttgcagcatttttcaaccgaaaca
actgccaatcagcaacagcaacaacaactggcgggaggtttggcagcagcagcagtcgcc
tttgctgcagcagccgcagcaaccaatgggccgacaacggcgggtgcgggcccagtcggc
agtgcagttcccagtgggctagctggtttaacgaacgcagctgtggggcagcctggagct
agtaatagtggtgttaatgcacctgtaggtagcaaaccacatcagcaacccacaaatgaa
gcgcatataacgcctttattgggcgttgcaccattgggtacattgcctttgcataaagat
caccaattgcaattcaaaatgatggaagccgcttactatcatctcccgacgccagccgat
tcggagagattaaatatatacctgccgcgaacgccagtgccgacaccactgcactatcct
cagcaacagcttccactctacgataccgttgaattttatcaacgactctcaaccgaaacg
ctcttctttgttttctattatatggaaggttcgaaggcgcaatatttagcagcgaaagca
ttgaaaaagcaaagctggcgatttcacacaaagtacatgatgtggttccaaaggcatgag
gaaccaaaaattattaatgatgattacgaacagggtacgtacatctattttgattacgag
aaatggagtcaacgcaaaaaggagggattcacttttgaatacaagtacttagaagacaag
gagctgaattga
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