Anastrepha ludens (Mexican fruit fly): 128863013
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Entry
128863013 CDS
T10909
Name
(RefSeq) SWI/SNF complex subunit SMARCC2 isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
alud Anastrepha ludens (Mexican fruit fly)
Pathway
alud03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
alud00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
128863013
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
alud03021
]
128863013
03036 Chromosome and associated proteins [BR:
alud03036
]
128863013
Transcription machinery [BR:
alud03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
128863013
Chromosome and associated proteins [BR:
alud03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
128863013
PBAF complex
128863013
GBAF(ncBAF) complex
128863013
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_3
SWIRM
SWIRM-assoc_1
Myb_DNA-binding
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
128863013
NCBI-ProteinID:
XP_053957872
LinkDB
All DBs
Position
2:complement(9371000..9375874)
Genome browser
AA seq
1156 aa
AA seq
DB search
MNTLGPKKDGSPNVEFFQSTESLQGFEIIRLWLQKNCKKYLANNTETITKESLAQLLIQF
LQYVEAKLGKNAQEPPATRIPMRLFMDFKPGGGLCVIFSAMFRFRAEQRGKKFDFSVGKN
PPRKDPNIQLLIDIETALVEANVYPIHYIYIRPEVSKELAQRLRDILITRRVQIVTDEEE
ATHIIYPVVDPHPDEYARPVFKRGNHVMLHWYYFPESYDSWAINSFDLPEYVPENPEQPA
EPWLVSASWVLDLEQYNEWMVEEDYEVDETGKKKTHKHRMSVDDIMSFGADEKKRVPGAS
GTTAKQKRRRSPSPNTSKPGKRKRSPAVLHKKARNDEDDEDLTRDMDDPPAEPNVQEVVK
SSSLQSTASPAPGGKSRADNDMIPIKGGTMTDLDDEMTGGSAVQALSTGDGENSQTGKTS
DNSNTQEFSSSAKEDMEDNVTEQTHHIIVPSYSAWFDYNSIHVIEKRAMSEFFNGKNKSK
TPEIYMAYRNFMIDTYRLNPTEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQIDAE
LRPTPMGPPPTSHFHILSDTPSGLQPLNPQKTQQPSAAKALLDLDKPKVIKDGKEGSVEG
DKPPLLPGGISIKSETLENGATTGQQFGLKLDQYAKKPAAMKNRTAANMTREWTDQETLL
LLEGLEMHKDDWNKVCEHVGTRTQDECILHFLRLPIEDPYLEDDGGFLGPLGCQPIPFSK
SGNPIMSTVAFLASVVDPRVAAAAAKAAMEEFAAIKDEVPATIMDNHMKNVEKASASGKF
NPSFGLANSGIAGTGADKEDEDVHGVGAVPGSMPVNTGAIDEEMRDVSKKDVANKTETKI
SETESKKKPDNVCKNGAEIKTEDTNDTDTSSKDTESAKQQVFNETNVQTAAAAALASAAV
KAKHLAALEERKIKSLVALLVETQMKKLEIKLRHFEELETTMEREREGLEYQRQQLITER
QQFHLEQLKAAEFRARQQAHHRLQQEQQWQGTAGSNASGGAPPASNPNASLGSTGNLPSA
TGQSIVTGATTTNANAPPSTGVGSVGPQGATATNQGTATSAAIGGNAQQTTTAPLGLPVA
ASASIQQQIATPMDTSSTSIAVPSAAGDGATITAQTILPPVGVSAGTSLPSSANAPLANV
QPTIPPCGAPPVVPPS
NT seq
3471 nt
NT seq
+upstream
nt +downstream
nt
atgaacactctagggcccaaaaaggacggaagtcctaatgttgaatttttccaatccacg
gaatcattgcaaggttttgaaataattcgtctgtggctacagaagaattgtaaaaaatat
ttagcaaataatacagaaacaatcacgaaggaatcgcttgcgcaattgctaattcaattt
ctgcagtatgtggaagccaaactaggcaaaaatgcacaagagccaccggcgactcgaatc
ccgatgcgtttattcatggattttaaacctggcggtggattatgtgtcatctttagcgca
atgtttcgattccgcgctgaacaacgtggcaaaaaatttgatttttctgttggcaaaaac
cctccacgtaaagatccaaatatccagttattgattgatattgaaacggctctcgttgag
gcaaatgtttatcctattcattatatttatatacgaccggaagtaagcaaagaattggct
caaagactgcgtgatattttgattaccaggcgggtacaaatcgttaccgacgaggaagaa
gctacacacattatttacccagtggttgatccacacccggatgaatatgcacgtccagtt
tttaaacgaggaaatcatgtaatgttgcattggtattacttcccggaatcttatgattcc
tgggctatcaactcatttgatttaccggaatatgtgcctgagaatcctgaacaaccagcc
gaaccatggctcgtgtcagcttcttgggttttagatctggaacaatataatgagtggatg
gtcgaagaagactacgaagtagatgaaacaggcaaaaagaaaacgcacaagcatcgtatg
tccgttgatgatataatgtcgtttggagccgacgagaaaaagcgcgttcctggtgctagt
ggtaccaccgctaaacaaaagcgccgccgctccccttctccaaacacttcgaagcctggt
aagcgtaaacgatcacccgccgtattacataagaaggcgcgtaatgatgaagacgatgaa
gacttgactcgggatatggatgatcctccagcagagcctaatgtgcaagaggttgtaaag
tcatcgtcgctgcaatcaactgccagtccagctcctggcggaaagtcgcgagccgacaat
gatatgatacccattaaaggtggtacaatgacggatttggatgatgagatgacaggtggc
agtgcagtgcaagccctttccaccggtgacggtgaaaattcacaaactggcaaaacaagt
gacaatagtaatactcaggaattctcttcctctgctaaagaagatatggaggataatgtt
accgaacagacgcaccacatcattgtgccgtcatactccgcctggtttgactacaattct
atccatgtcattgaaaaacgagccatgtccgaatttttcaatggcaaaaataagtcgaaa
acaccggaaatctatatggcatatcgaaattttatgattgacacatacagattaaatccc
actgagtatttaaccagcaccgcatgtcgcaggaatcttgctggtgatgtttgtgctata
atgcgtgtccacgcgttcttggagcagtggggtctcattaactatcaaatagacgctgag
ctgcgtccaactccaatgggtccaccgcctacttctcatttccatatattgtcagacaca
ccatctggtttgcaaccattgaatccacaaaaaacacaacagccatcagcagcaaaagct
ttgcttgacttggacaaaccaaaggttattaaagatggtaaagaaggttcggtggaaggt
gataaaccgccactcttacctggcggtataagtatcaaaagcgaaactttggagaatggt
gcaaccactggccagcaattcggcttgaaactagatcaatatgcaaagaagccagctgca
atgaaaaatcgaacggcggctaacatgacgcgcgagtggacggatcaggaaactttgctt
ttgctcgagggcctcgaaatgcacaaggacgactggaataaggtttgcgaacacgtagga
acacgcacccaagacgagtgcatactgcattttcttcgattgcctatcgaagacccatat
ctagaagatgatggtggatttttgggaccactgggttgtcaaccaataccatttagtaaa
tctggcaatcctataatgtcgacagtggcgttcttagcttcagtagtagatcctcgcgta
gccgcggcagctgcaaaagctgcaatggaagaatttgctgctataaaggacgaagtaccc
gctacaattatggataatcatatgaagaacgtggaaaaagcttctgcgagtggtaaattc
aatccatctttcgggctagcgaacagcggcatagccggcactggcgctgacaaggaagac
gaagacgttcatggagtaggtgcagtaccaggatcaatgccagtgaacacaggtgcgata
gatgaagaaatgagggatgtttcgaagaaagacgttgctaataagaccgagacgaaaatt
agtgaaacagagtccaaaaagaaaccagataatgtctgcaaaaatggtgctgaaattaaa
actgaagacaccaatgacacagatactagttcaaaagataccgaatccgcaaagcaacaa
gtatttaatgaaacgaatgttcagaccgctgcggccgcagccctggcctcggctgctgtt
aaagccaaacacttggctgctttggaggaacgtaaaatcaagtcgctggtggctttgctg
gtcgagacgcaaatgaaaaaattagaaataaaacttcgacatttcgaagagctagaaaca
acaatggaacgtgaacgagagggactagagtatcagcggcaacaactaataaccgagcgc
cagcaattccatttggagcaactgaaagctgcagaattccgagcccgtcagcaagcccac
catcgcctgcaacaagaacaacaatggcaaggaacagctggatcaaatgcgtcaggcggt
gcgccaccagccagtaaccccaatgcctccctcggaagtaccggtaacctaccgtctgca
accggtcaatctatagtaactggcgccaccaccacaaatgccaatgcaccgccatcaact
ggtgtaggcagtgttggaccgcaaggcgcaactgcgacgaatcaaggtacagccacatct
gcagctataggtggcaatgcacaacaaactacaacagcaccgcttggtttacctgtcgca
gcatcggcttctatacaacagcaaatagccactccaatggacacatcttcgacatccatc
gctgtaccgtcagctgctggagacggcgctacgatcactgctcagacaattttgccacca
gtcggtgtatcagctggtacatcactaccctcatctgcaaatgcaccactagcaaatgtg
caaccaaccattcctccatgtggagcaccacccgtagtgccgccatcataa
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