KEGG   Anastrepha ludens (Mexican fruit fly): 128863493
Entry
128863493         CDS       T10909                                 
Name
(RefSeq) uncharacterized protein LOC128863493
  KO
K12623  U6 snRNA-associated Sm-like protein LSm4
Organism
alud  Anastrepha ludens (Mexican fruit fly)
Pathway
alud03018  RNA degradation
alud03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:alud00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    128863493
  09123 Folding, sorting and degradation
   03018 RNA degradation
    128863493
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:alud03019]
    128863493
   03041 Spliceosome [BR:alud03041]
    128863493
Messenger RNA biogenesis [BR:alud03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     128863493
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     128863493
Spliceosome [BR:alud03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    128863493
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 128863493
NCBI-ProteinID: XP_053958662
LinkDB
Position
5:complement(54519401..54520109)
AA seq 141 aa
MLPLTLLKTAQSHPMLVELKNGETYNGHLVSCDSWMNINLRDVICTSKDGDRFWRMPECY
IRGSTIKYLRIPDEVIDMVKDDAHAKSRNRSEIGKGRPGTGIQNQNLRGQIRPRYKNAQP
NGAKSVLRGQISHPSSNKNRK
NT seq 426 nt   +upstreamnt  +downstreamnt
atgctacccctaacgctattaaaaacggctcaaagccatccaatgctagtcgaactcaaa
aatggtgaaacctataatgggcatttggtgagctgtgattcatggatgaacataaatctt
agagatgttatttgtacttctaaggacggagacagattttggcgaatgcccgaatgttat
atacggggcagtacaatcaaatacttacgaattccggatgaagttattgatatggttaag
gacgatgcacatgctaaatcaagaaatcgttccgaaattggtaaaggtcgaccaggcaca
ggaatccagaaccaaaatttgaggggccaaattcgaccgcgatataagaatgcccagccc
aatggcgcgaaaagtgttctgcgtgggcaaattagtcatcctagttctaataaaaatagg
aaataa

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