Anastrepha ludens (Mexican fruit fly): 128864026
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Entry
128864026 CDS
T10909
Name
(RefSeq) exosome complex component RRP41
KO
K11600
exosome complex component RRP41
Organism
alud Anastrepha ludens (Mexican fruit fly)
Pathway
alud03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
alud00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
128864026
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
alud03019
]
128864026
Messenger RNA biogenesis [BR:
alud03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
128864026
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
128864026
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
128864026
NCBI-ProteinID:
XP_053959472
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All DBs
Position
5:complement(11801941..11802912)
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AA seq
249 aa
AA seq
DB search
MSSFELLSEQGLRLDGRRPHELRCIKCKLGVFEQPDGSAYLEQGNTKVLAAVYGPHQAQM
KKLDLNEVVINCQYSMATFSTAERKNRPRGDRKSQEITLYLRQALCAAIKTELYPRSQID
VYVEVLQADGANYAVALNAATLALVDAGICLKEYVVACTASLSKNNIPLTDVSHVEEVSG
GPTLTVASLPTSNKIAFMEMSQRFHLDNLPAVMEQALNGCREIQAIMEKEVRKHLMQMGS
AGDWSNIAK
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atgtccagttttgagttacttagtgagcagggattgcgactagatggtagacggccgcat
gagcttcgttgtattaaatgtaagctgggtgtatttgagcaacccgatggcagtgcatac
ttggagcaaggcaacaccaaggtgcttgcagctgtgtacggtccgcatcaggcacaaatg
aaaaaacttgatcttaatgaagtggtaattaattgtcaatatagtatggcgacattttca
accgcagaacgtaagaatagaccacgtggcgaccgaaaatcgcaagaaatcacactatat
ctacgacaagcactttgtgctgcgatcaagaccgaactatatccacgctcacaaatcgat
gtatatgtggaagttttacaagcagatggtgcaaattatgcagttgcacttaatgccgct
acattagccttggtggatgcaggtatatgccttaaggaatatgttgtggcttgtacggct
tcattaagtaaaaataatataccacttacggatgtttcgcatgtcgaggaagtttcggga
ggaccaacattaacggtcgcatctttgccaacatcaaataaaattgcatttatggaaatg
tcgcaacgtttccaccttgacaatttgccagccgttatggagcaggcgttgaatggttgt
cgagaaatacaagctataatggaaaaagaagtgcgaaagcatctgatgcaaatgggttca
gctggagactggagtaatattgcaaaataa
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