Anastrepha ludens (Mexican fruit fly): 128864145
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Entry
128864145 CDS
T10909
Name
(RefSeq) nonsense-mediated mRNA decay factor SMG8
KO
K18734
protein SMG8
Organism
alud Anastrepha ludens (Mexican fruit fly)
Brite
KEGG Orthology (KO) [BR:
alud00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
alud03019
]
128864145
Messenger RNA biogenesis [BR:
alud03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
128864145
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg8_Smg9
Motif
Other DBs
NCBI-GeneID:
128864145
NCBI-ProteinID:
XP_053959639
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Position
5
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AA seq
895 aa
AA seq
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MPEYQSWTFPDIPADLIELFFQNDEKLVVVGVIGKSAFCDSNKMVAIGVLDSHPSLLKHE
PQEGSIQFYYNRKKSMLLLHFETTFDAACMQKMLEEELAQDTYGHFLLFNQRVRNRFARM
MLFATQICHVIVFVELNVTFDSSLLMIFRALKIIRDKYILKFLPKLVKNSSTGTFLGKSA
RLCSPRVLFLFENYPDGYEKTNECISKLEFEVEDSIYKMLRNEFIITNNSGMSLFSIPSN
KRFVYYNTDPRLREDPLLKSITLLQSFLQKSNFKEDDEDDLEDLQPFKGFGKPLIQCNLE
RIQQSAKETCVKERNFMDLLTDHVNEALQTGFDDSSTKFKGKNHFVILPAKSWYETFKML
HKIFIENPDNPKFEANDGDYKAYLENFNKIMNIDDEFFNACCDIGLQKAFAMYNNPTLTH
YSSTVHKKLVDEAVILYMKYARGTQTVINESKLREMCERCWQNGKQQCELPSLRGHPCIL
PKHIVKDASEHSSAHVFISACNCGRTQGRREDPYTIRHANYEFYEYMANNCNLCAKVKKV
HFPVFEPSVNDYRAAEFEVAFPKLSIHDSMDLADRHNLRSPDSIDSDECSQPLTASQGTH
TNLSLVSSDVLDKIAVNDADMQSSDESLNELVIQVKDKDAQKAEEKERSIYRQPSTTEYL
PGMVHTESPLGLLPRFPSWSLVCAGPSSVYSHNTGLMEHFQSGFLSGANFLLPWDVHVRL
EHSQSWAYEKTRLRKMGEVFILKIFVGCEYECPRGHRFMMSSADKVLRGGSGILRDSGSK
IVYNNMPLYFPCPCRSHKADVAQLMRVHVVTPKAPVNVILDPKVRTGEREYIFSMGLPNP
PKLTQSAYWILRLPYIYQGDAGPIAPPTEVSATNAINYGCLLAGMFGVSETEVDD
NT seq
2688 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaatatcaaagttggaccttcccggatatacccgcagatctaatcgaactgttt
ttccaaaatgatgaaaagctggtggtggtgggtgtaatagggaaatcagctttctgcgat
agcaataaaatggttgcaatcggtgtgttagacagtcaccccagcttactaaagcatgag
ccgcaagagggtagtattcaattctattataaccgtaagaagtcgatgttgcttctgcac
tttgaaaccacatttgatgccgcctgtatgcagaaaatgcttgaggaagagctggcacaa
gatacgtatgggcatttcttgctattcaatcaacgtgtgcgtaatcgttttgcgcgaatg
atgctctttgccacacagatttgtcacgtaattgtttttgttgaactaaatgtaactttc
gattcatctctgttgatgatctttagagcactaaagattataagggacaagtacatacta
aagtttttgccgaaactggttaaaaactccagcactggtacatttttaggcaaatctgca
cgcttgtgttcaccacgtgtacttttcctcttcgagaactatccggatggttatgagaaa
acaaacgaatgcatttctaaactagagtttgaagtggaggatagcatttataaaatgctg
cgaaacgaattcattatcaccaacaacagcggcatgtcgcttttttctataccgagcaat
aagcgttttgtctactacaacacagacccacgactgcgtgaggatccattgctgaaatca
ataacattgctgcaaagctttctgcagaaatctaattttaaagaagacgacgaagacgat
cttgaagatttgcagcctttcaagggatttggtaaaccactcatacaatgcaatctggaa
cgcattcaacaatctgcaaaggaaacatgtgtcaaagagcgtaattttatggatttattg
acggaccatgtcaatgaagcactacaaacgggctttgatgatagttcgaccaagtttaag
ggcaaaaaccattttgtgatactcccagccaagtcctggtacgaaactttcaagatgttg
cataagattttcatcgaaaatccagataatcccaaatttgaggccaatgatggagattat
aaagcatacctggagaatttcaataaaattatgaacatcgacgatgaattcttcaacgcc
tgctgtgacatcggcttgcagaaggcttttgcaatgtataacaacccaacattgacgcac
tacagcagtacagtgcataaaaaactggttgatgaggccgttattttatacatgaaatat
gcgcgcggtacacaaaccgttattaacgaatcgaaactacgtgaaatgtgtgagcggtgc
tggcaaaacggtaaacaacaatgcgagctgccgagcctacgcggccatccttgcatactg
cccaaacacatcgttaaagatgcctcggagcacagcagtgcgcacgtatttatctccgca
tgtaattgtgggcgcacacagggacggcgtgaggatccctacactataaggcatgcaaat
tatgagttctacgaatacatggcgaataattgtaatctttgcgccaaagtaaaaaaagtg
catttcccagtttttgaaccgtctgtcaatgattacagagctgccgagttcgaggtcgca
ttcccaaagctgtcaatacacgattctatggatttagctgaccgacataatctgcgctct
cccgattccattgattctgacgagtgctcccaaccacttaccgcctcacaaggtacgcat
accaacctgagtctcgtctcatccgatgtactggataaaatcgccgttaatgatgctgat
atgcaaagctccgacgaatcgcttaatgaattagttatacaggtgaaggataaagatgca
caaaaagcagaagagaaagaacgtagtatatataggcagccatctactactgagtatcta
cctggcatggtccatacggagtcgccattgggtttgctgccacgttttccgagttggtcg
ctggtgtgtgccggtccaagttctgtttacagtcacaacaccggtctgatggagcacttt
caaagtggttttttgtcgggcgcaaattttctgctcccctgggatgtgcatgtacgtttg
gagcactcgcaatcgtgggcatatgagaaaacacgtctgcgtaaaatgggtgaagtattc
atattgaagatatttgttggttgcgagtatgagtgcccgcgaggtcatagatttatgatg
agctcggcagataaggttttgcgcggtgggtcaggtatacttcgtgatagtggcagtaaa
atagtctataacaatatgcccttgtatttcccatgtccttgtcgttcgcacaaggctgat
gtggcgcagctaatgcgtgtgcatgtggtgacgccgaaggcacctgtaaatgtaatcttg
gatccaaaggtgcgcactggtgaacgagaatatattttttcgatgggtctgcccaatcct
ccgaaactaacacaaagcgcttactggattttgcgactcccttacatatatcaaggtgac
gcaggacccatagctccaccaaccgaagtatccgcaactaatgcaatcaattatggttgc
ctgttggctggcatgtttggcgttagcgaaacagaagtggatgactaa
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