Anastrepha ludens (Mexican fruit fly): 128865077
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Entry
128865077 CDS
T10909
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
alud Anastrepha ludens (Mexican fruit fly)
Pathway
alud03082
ATP-dependent chromatin remodeling
alud03250
Viral life cycle - HIV-1
Brite
Protein phosphatases and associated proteins [BR:
alud01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
128865077
Transcription machinery [BR:
alud03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
128865077
SWI/SNF complex
128865077
Chromosome and associated proteins [BR:
alud03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
128865077
PBAF complex
128865077
SWI/SNF complex
128865077
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF5
INI1_DNA-bd
Motif
Other DBs
NCBI-GeneID:
128865077
NCBI-ProteinID:
XP_053961003
LinkDB
All DBs
Position
2:22822535..22828157
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AA seq
370 aa
AA seq
DB search
MALQTYGDKPVAFQLEEGGEYYYVGSEVGNYMRLFRGILYKKYPGMTRLVLSNEERKRLA
DSGLSSHILASSVSLLRAVEVDDIIAGNDEKYRAISVNTSETPLPRESKSKKQPQYVPTM
PNSSHLDAVPQATPINRNRVHTKKVRTFPMCFDDTDPSTNIENAAQKECLVPIRLDMELE
GQKLRDTFTWNKNESMITPEQFAEVLCDDLDLNPIPFVPAIAQAIRQQIEAFPNEPPILE
ESSDQRVIVKLNIHVGNTSLVDQVEWDMSEKNNNPEEFAIKLCAELGLGGEFVTAIAYSI
RGQLSWHCRTYAFSEAPLSTIDVPFRNPSDADAWAPFLETLTDAEMEKKIRDQDRNTRRM
RRLANTTTGW
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atggcgttacaaacctatggagataagcctgtggcttttcagttggaggaaggcggcgaa
tattactatgtgggctcggaagtgggcaattatatgcgtttgtttcgtggtattttgtat
aaaaagtatcctggtatgacgcggttagtactctcaaatgaagagcgtaaaaggctcgct
gattctggcctgagttcgcatatattggccagttcagtatctttgctacgtgctgtcgaa
gttgatgacattattgctgggaacgatgaaaaatatcgagcgatatcggttaacacatcg
gaaacacctcttccacgtgagagtaagtctaaaaaacaaccgcagtatgttcccactatg
ccgaattccagccatctggacgcagttccacaagctacaccaatcaatcgcaatcgggtt
catactaaaaaagttcgcacttttcccatgtgctttgatgataccgatccaagtactaat
attgaaaacgcagcacaaaaggaatgtttagtaccaatacgtctagacatggaattggag
ggacagaagttgcgcgacacattcacttggaataaaaatgagagtatgataacaccagaa
caatttgctgaagtactttgtgatgatttggatctaaatcctattccctttgttcccgcc
attgcacaggcaattcgacagcaaattgaagcgtttcccaatgaaccaccaatactagaa
gaaagtagtgaccaacgtgttattgttaaacttaatattcacgtcggtaatacctccctt
gttgaccaagttgagtgggatatgtctgaaaagaataacaatcctgaggaatttgctata
aaattatgcgcagaacttggtttaggaggagagttcgtaacagcaattgcttacagcata
cgaggccaattgtcctggcactgtcgtacttatgcttttagcgaggctccgctatcaacc
atcgacgttcccttccgaaaccccagcgatgctgatgcatgggcaccattccttgaaacg
ttaaccgatgctgaaatggaaaagaagatccgagatcaagatcgtaatacgcgccgtatg
cgccgcttagccaacacgactaccggttggtag
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