Anastrepha ludens (Mexican fruit fly): 128865456
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Entry
128865456 CDS
T10909
Name
(RefSeq) probable ATP-dependent RNA helicase DDX55 homolog
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
alud Anastrepha ludens (Mexican fruit fly)
Brite
KEGG Orthology (KO) [BR:
alud00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
alud03009
]
128865456
Enzymes [BR:
alud01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
128865456
Ribosome biogenesis [BR:
alud03009
]
Eukaryotic type
Pre-60S particles
Helicases
128865456
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
CTT_SPB4
ResIII
Helicase_C_2
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
128865456
NCBI-ProteinID:
XP_053961829
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All DBs
Position
2:complement(24275477..24277942)
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AA seq
603 aa
AA seq
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MARRKWTELEKVSLSPAVLSVIASFGFERTTPVQSATIPLLLERKDVSVEAVTGSGKTLA
FVVPMLEMLQRRQADIPWESKEIGSLIISPTRELAYQISEVLAKFLEREELQYLRQKLVV
GGSSIEEDIRAIKKESPTILVCTPGRLEDLFDRKGDLNLAGRVKSLEFLVLDEADRLLDL
GFKATINNILGYLPRQRRTGLFSATQTTEVTDLIRAGLRNPVRVSVKEKSTISTPAKLQN
FYKIIEPEEKFLALLHFLRSPQTAQGKVMVFFPTCACVEYWMAIMTHFLPKRCILAIHGK
MKNKRKNVVERFRQIKDAVLLSTDVLARGLDVPEIDWVVQWDPPASASSFVHRVGRTARQ
GNEGNALVYLLPSEDAYITFLRINQKVELSELLDADHNREELEQTLQKLHKLQLKDKDIF
DKGTRAFVSHIQAYRKHECNAILRLKDLDLGRVATAYGLLQMPRMPELKNCAETNFIGPN
FAVDVTKLSYQNQQKENQRKEKLKIYEESGVWPGKKKFKKNTESWEQTKKAKMDTKTKKE
LRKAKKQRKKESETQTGATAKKRKPQYTKEDLEELANDIRLFKKLKKNKISEEDFDKEMG
IED
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atggcacgtagaaaatggaccgaactagagaaggtatcactttctccagccgttctgagt
gtcatcgcaagttttggatttgagagaacaacccctgttcaaagtgccacaatacccctg
ctgctggaacgaaaagatgtcagcgtcgaagcggtaaccggctccgggaagacattagcc
tttgtggtgcccatgctagagatgttacagcgtcggcaagctgatataccatgggaatca
aaggaaatcggttcacttattatttcgcctacgcgtgaattggcctatcagatatccgaa
gtgttagctaaatttctggaaagagaggagttgcaatacttgcgccaaaaattggtagtg
ggtggtagcagcatagaagaagacattcgtgcgattaaaaaagaaagtcccacaattttg
gtatgcactcccggcagattggaggacttattcgatagaaaaggcgatctcaaccttgca
ggccgagtgaaaagtttggaattccttgtgttggatgaagctgatcgactacttgatttg
ggtttcaaggccacaattaacaacattcttggttatttgcccagacagcgacgtactggc
ttgttttctgccacacaaacaactgaagtaacagatcttattcgtgccggtcttcgaaac
cccgttcgggtatcggtcaaagaaaagtccaccattagtacaccggccaaattacaaaat
ttttataaaattatagagcctgaggaaaagtttttagctctcttacattttttacgttca
ccacaaactgcacaggggaaagttatggtgttctttcccacctgtgcgtgcgtagaatac
tggatggcaataatgacacacttcttgcccaagcgctgtatattagccattcacggcaaa
atgaaaaataaacgtaaaaacgttgtagaacgattcaggcaaataaaagacgccgtttta
ctcagcacggatgtgttggctcgtggtctggatgtacctgaaattgactgggtggtgcaa
tgggatccaccggcaagcgcaagcagttttgtacatcgtgtaggacgtacggcacgccaa
ggtaatgaaggcaatgctttggtatatctactgcccagcgaagatgcctatattactttt
ctgaggataaatcaaaaagttgaattaagtgagctactggatgcggatcacaaccgtgaa
gagttggagcaaacactacaaaaactgcacaaacttcaattgaaagataaagatatcttt
gacaaaggcactcgcgccttcgtatcacacatccaggcatacagaaaacatgaatgcaat
gcaattttacgtttaaaagatttggacctggggcgagtagctacagcttacggcttgctg
cagatgccgcgcatgccagaattgaaaaattgtgcagagacaaattttattggaccaaac
ttcgcggtagatgtaacaaaattgagctatcaaaatcagcaaaaggagaatcaacgaaaa
gagaaactcaagatctatgaagaaagcggtgtatggcccgggaagaaaaaatttaaaaag
aacacagaatcatgggaacaaacaaaaaaagcgaaaatggatactaaaaccaaaaaagaa
ttaagaaaagctaagaaacagcgcaaaaaagaaagtgagacacagactggcgccacagcg
aaaaaacggaagccgcagtacacaaaagaagatttggaggaactagccaacgacatacgc
ctatttaaaaagttaaagaaaaacaagatttccgaggaggacttcgataaagaaatgggt
attgaagactag
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