Anastrepha ludens (Mexican fruit fly): 128866239
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Entry
128866239 CDS
T10909
Name
(RefSeq) enhancer of mRNA-decapping protein 4 homolog isoform X1
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
alud Anastrepha ludens (Mexican fruit fly)
Pathway
alud03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
alud00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
128866239
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
alud03019
]
128866239
Messenger RNA biogenesis [BR:
alud03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
128866239
mRNA degradation factors
5'-3' decay
Decapping complex
128866239
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40_Prp19
EIF3I
Beta-prop_EML_2
WD40
YpjP
Motif
Other DBs
NCBI-GeneID:
128866239
NCBI-ProteinID:
XP_053962791
LinkDB
All DBs
Position
6:complement(114122182..114129922)
Genome browser
AA seq
1376 aa
AA seq
DB search
MLISVVIIIALIRSCLQRLRRRDSLDSDFAITGRTSEIKMSVNYMGQQQQTDVDNVGSSM
LTSDALNGIGAVSSGSIITFKPDDNQCTHEITNNNVKVICSPGTHDHGSSKVKLKNIVDY
KWELKNYPGHLIAVHMDGKHIAYVINVNNKLSRVEGMVRVVKAQTGLRGLIKGMSGEVLD
LQFAHIEKERILGSIDMNSLYIHKIDLVGNNLLCNLIVKIEDPLSNYSPKYDKISWCPFI
DVPGEDDEDSELIAWARGSVLQCFNINVIVTEYGKSAGVIHPNDISTGYLKVYNELCTIS
WVALSPDGSTLGVGSTDGVIRFYQVYMHDKEPRCLHQWNPHNGKPISSFFFLDNLTKNVS
ETYWKYAITGAADNTEFKVWDCSTWECLQSLCITTATEEKKPLRFIAEIDRTSSYFVISS
LDTRTCYIMQIVNNSNNISLTKGSDNESNNNLANISISSNSSIGSFKSLSKSSPSLVYIK
SISEFPLSSGILSFSIVDAAVRRYKCGNDNYLCDEFDDYDEETNSTYCVVVRMFIVQSKS
MQECRILYQPSVTENTDVRSTLSDESGEVIASKDSSLLDSVVSCIGSGGSDIIKGGVIGI
ANSLNSNKLSHSHIKSEDVNEERVKQEKNSKTNSLESLLGIATAPSVSVANQMTVQTATI
SSSVVTVAATASAIPAAVSAELNDVRSRTASPQTSNKSFTQVNLMTPDAFSSTLSDKNTN
DCVSSEVLNTILMLASVAGQTSAPKTETINILNLVNNKIIEDQEHQKLQLKQSLDPQKKF
IAIENNVGRNLNNLASGGSSPSREVQEIMSLQEHDSGDDELRDKTATNIKEKVDNSPAAQ
MDEQGSDVSASTCHSTSSIPNWPKVPEMHKSATKHSTELQNAANLISQAVSASSGNNLNN
SHVAPNLISINSSSNGNLQGMGGSSNTEFSELNGKISQLIDLVKAQSMQINNLQAEVASM
KKANPMASTKIMSEFSFKLEMQLSKLLEQYLKRYENEHKEKLAAFMAGRDQQNRELRESL
IQILNQYILTHLGEVVSKVINVEIQRQLAPMLSAKIEHLQQQIQLDVAQKLTAFDLMLKE
NISQVCKSKNIIDTFGKSVLVGVQGSLQAAFIESMSSTLIPAYEKSSQNMFKQLHDAFSV
GIKEFMVQFDNYLQHLQPMQDSTEEVLNKFSGFRQHLDSILIKHRNSVTETMLETRKDVK
SLEILLSRQIQETLRTEMRRCFENQTVALRSQTNTPAPMFDMKDTIKLLLHQNQINKAFH
QALLANDLNLVEFTLRNADHATVFTPDCCLEQKVLLSLIQQISADMSNHNEVKQNYLADA
LLAINPMDPITREHAPKVLQELFRNCKMFLVNHSKSPQCSNVRMLMKAVQAYMDQI
NT seq
4131 nt
NT seq
+upstream
nt +downstream
nt
atgttaatttctgtggtaattataattgcgcttataaggagttgtttacagcggttgcga
aggcgtgacagtctggattcagattttgcaataactggacggaccagtgaaattaaaatg
agtgtcaattacatggggcagcaacaacaaactgatgttgacaatgtgggttcgtctatg
ctaactagtgatgctctaaatggcattggtgcagtttccagtggcagtatcattactttt
aaacctgacgacaaccaatgcactcatgaaatcacaaataataatgtgaaagttatttgc
agtcccggcactcatgatcatggatcttcaaaagtgaaattaaagaacattgtggattac
aaatgggagttaaaaaactatcctggtcatttaattgctgtgcacatggatggaaaacac
attgcctatgtcattaacgttaataacaaactatcacgtgttgagggtatggttcgtgtt
gttaaagctcagacgggacttcgtggcttaatcaaggggatgtcgggggaagttctcgat
ctacaatttgcacatattgaaaaggagcgtatactcggttcaattgatatgaattctctt
tacatacataaaatagatcttgttggtaacaacttgctatgcaatcttattgtgaaaata
gaagatccgttgtcaaattattctcccaaatatgacaagatatcttggtgcccttttatt
gatgtccccggtgaggatgatgaagatagcgaattaattgcgtgggcgagaggttcagtg
ttacaatgtttcaatataaatgttatcgtaactgaatatggaaagagtgcgggtgttata
catccgaatgatatttcgacaggctatttaaaagtctacaatgaactgtgcaccataagc
tgggtagctttatctcccgatggttctactttgggtgtaggcagtactgatggtgttata
cgtttttatcaagtttacatgcatgacaaggaacctcggtgtttacatcaatggaatcca
cataatggaaaacctatatcatctttcttttttctagacaatttaaccaaaaatgtgtct
gaaacttattggaaatatgctatcaccggcgccgctgataatactgaattcaaagtatgg
gactgcagtacttgggaatgcctgcaatcactctgcattaccacagcaacagaagaaaaa
aaaccgttgcgttttattgctgaaatcgatcgaacatcctcgtatttcgttatatcaagt
ttagatacacgcacatgttatatcatgcaaattgtaaataacagcaacaatatatcacta
acgaaaggttctgataatgagagtaacaacaatttggcgaatatcagcattagtagcaat
agtagtattggcagtttcaagtctctttcgaaaagttcaccttcgctcgtatatataaaa
agcatttcagagttcccacttagctccgggattctatcattttcaattgtcgatgctgca
gtgcggcgttataaatgtggcaacgataattatctatgcgatgagtttgatgactatgat
gaggaaactaattccacatactgcgtagtggtgcgaatgtttattgtgcaatcgaagagt
atgcaggagtgccgcatactatatcaaccatctgttacggaaaatacggacgtgcgaagc
acattgtctgatgagagcggagaagtaattgcttctaaagattcatccttactagatagc
gtagtaagctgcattggaagtggtgggagtgatattatcaagggtggtgttattggaatt
gcaaacagtttgaactcgaataaattatcacattcacatattaaatcggaagacgtaaat
gaggaacgcgtaaaacaagaaaaaaacagtaaaaccaattctttggaatcattactcggt
attgcgacggccccatctgttagtgtcgctaatcaaatgaccgtgcaaacagcaaccatt
tcttcttcagttgtcacagtggcagctacggcatccgctataccagcagcggtgtccgct
gaactaaatgatgttcgatcgcgcactgcttctccccaaacaagcaataaaagcttcaca
caagtaaatcttatgacaccggatgcatttagctccacattaagtgataaaaacacgaat
gactgtgtcagttctgaagtgttaaacacaattttaatgttggccagtgtagcgggacaa
acatcggcaccaaaaacagaaactataaatattttgaatttggtaaataataaaataatt
gaagatcaagaacatcaaaaattgcaattgaaacagtctttagacccgcagaagaaattt
atcgctattgaaaacaatgtcggccgtaatttgaacaatctggctagtggtggatcaagc
cccagtcgggaagtacaggaaatcatgtcactacaagagcatgacagtggcgatgatgag
ttacgcgacaaaactgctactaatatcaaggagaaggtggataattcaccagcagcccaa
atggatgaacaaggatcggatgtgtctgcttccacatgccattccaccagcagcatcccg
aattggccaaaagtcccggagatgcacaaatctgctaccaaacattcaactgagcttcag
aatgcggcaaatttaatttcacaagcagtaagcgcttcttcggggaataatctcaataac
agtcatgttgctccaaatcttataagtattaacagcagcagtaatgggaatcttcaaggt
atgggaggtagcagcaacacggaattctcggaattaaatgggaaaataagtcaattaatt
gacctagtaaaggcgcaatcaatgcaaattaacaatcttcaagcagaagtggccagtatg
aagaaagcaaatccaatggcatctacaaagattatgtctgaattctcatttaaattagaa
atgcagttgtcaaagctgctggaacagtatcttaaacgttacgaaaatgagcacaaggag
aaattagcagcttttatggccggacgggatcagcaaaatagagaattacgggaaagttta
attcaaattctgaatcaatatattttaacacatcttggggaagtcgtatccaaggtgata
aatgtggaaattcagcgacaattagcaccaatgctgtcagcgaaaattgaacacttgcaa
caacaaatacaattagatgtcgctcagaaactaacagcttttgaccttatgcttaaggaa
aatatttcacaagtttgcaagagcaagaacataattgacacttttggaaaatccgttttg
gttggggttcaaggtagtctgcaggcagcatttattgaatcgatgtctagcactttgata
ccggcttacgagaagtcatcacaaaatatgtttaaacaactacatgacgctttttctgtt
ggaatcaaagaatttatggtacagttcgataattatctgcaacatttgcaacctatgcag
gactccacagaagaggttcttaataagttctccggctttcgtcaacatttggactcaata
ctaattaagcatcggaattcggtgacagaaacaatgcttgagacacgtaaagacgtgaaa
agcctagagattctactttcgcgacaaattcaagaaactcttcgcactgagatgcgaagg
tgttttgagaatcaaactgttgcgttacgctcccaaaccaacactccggctcccatgttt
gacatgaaagacactataaaattactactccatcaaaaccaaatcaacaaagcatttcat
caggctttgttggcaaatgatttaaatttggtggagtttaccttaaggaatgccgaccat
gctacggtcttcacacccgattgctgcttggagcagaaagtgttattatcgctgattcaa
caaatctcggccgacatgagtaatcacaatgaagtaaaacaaaactacttagccgatgct
ctactagctattaacccgatggatcccattacgcgtgaacatgcaccaaaagtactgcaa
gaactatttcgtaattgcaaaatgtttttggtaaaccattccaagagcccgcagtgtagc
aatgtgcgtatgttaatgaaggccgttcaagcatatatggaccaaatttaa
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