Anastrepha ludens (Mexican fruit fly): 128866373
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Entry
128866373 CDS
T10909
Name
(RefSeq) tetratricopeptide repeat protein 37
KO
K12600
superkiller protein 3
Organism
alud Anastrepha ludens (Mexican fruit fly)
Pathway
alud03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
alud00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
128866373
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
alud03019
]
128866373
Messenger RNA biogenesis [BR:
alud03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
128866373
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_16
TPR_2
TPR_14
TPR_8
TPR_1
TPR_19
TPR_CcmH_CycH
TPR_12
CFAP70_TPR_C
TPR_6
TPR_7
TPR_9
TPR_17
TPR_11
CABIN1_N
ARM_TT21_C
CFAP70_mid_TPR
ANAPC3
DUF7017
TTC22_N
TPR_Psidin_N
TPR_Slam
Motif
Other DBs
NCBI-GeneID:
128866373
NCBI-ProteinID:
XP_053963021
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All DBs
Position
6:complement(68288610..68294648)
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AA seq
1236 aa
AA seq
DB search
MSSKETKAILKEVREAIKTENFNDAIEKCEALLQDEPNNYMAYLLLGAAYQNSNKDQAAK
YLRKAVEFSPAAPTVALQGLANCAPLNELPKIYEQLLDLVPEKSSYYFERLYVAGINNRC
VGEECFNILKSEFKRNDQDVERRKYVLKYLAQLWVHFDFDVVEEDETTYKYALEELIADP
DAEQYLNAYKRYLKLLYKKGDYTNCIKHACAVTEKYPHDIYAYEWVCKIYCECREVATEC
LNNQNQNIEQYVAALLQLNKNASLGLLIKAIEFYEQRQFVAARDLLYRVRELQPTYTIAL
ELLARVEMVIGVWSMALSIWCKIGKKNSVEHALCLSHVSNEKAQLRETTEMLQKFDQNED
VMAVLARCYFKLGYIDQLKTLQLSILQQAEFLETPEAAIDLLQSCADTESFETLFLLSKL
HLQLSHYATALNCMLKATRLQPYCAECFHYLGKIYYITKDIVRARKCFEKCVSLNPLCED
AVNNLSAIYQQLAEEDLNAALLLNTLQHMEFNDSKRIHYKLGLHFFNVNKWDDAIQSFRT
AIKLDVSCMHYWESLGDAYAERGSYNSAIRVFQKILEMNPHNIYAKLQIALIKSTVRMYP
EAIAEFDELLRTHPDYLPGLKGAAEAHIGLANNLKLEHLYGRCKYHLQMAVNHLQRAFLS
LNDNNMFWLWRLTANVFVQTSRMPSSLAYLEVSGKLAKLEDETAILSRKDLFILAARFYT
CAIKLKSNTFIWYEFALCCYYCAVYVPDVAVTQLELATKACKMAIHEQSDRWQNWNLLGV
INLHNVINNLALAQHCFIQALTLERKSYMSWTNLGALYLKLGEIKLANQAFQRAQQSSPI
YGNAWIGQAMIAEAIGEEEEALDLFRHCQQFEYHPESALGYAHWVCTVLADPQKCEITHY
RHAINSMYADVVALDAINWYVVNEEKDATLAALSFQGFLNLQQKHYRPAERAYLQAVEST
VATTNEQRDKLLTNLGYLYLKMNRPNDAINVFNRVTHASLKAIIGLALAFVRAGQHQEAY
SLYNSVLKSLVADNEDKAGMILVAMAAMVYASQGEADTKTILYQCILLKNSPIQALYSAC
ALGILHDDNQLTMTILTELKKYENSEVHSGHIAYLTAQHYVATKKTRKGLTYLLSRVHVF
PHCAELRKVLADFLLNNFSHASQYHVATSQIALSSISLSHRNKAQKSDCIEDSKSLLIAS
RALKPVDKLRSLKLIQHAIRLHPQNQNAWLALQEVY
NT seq
3711 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagcaaggagaccaaagcaatacttaaggaagtccgagaagctattaaaactgaa
aatttcaacgatgcaatagaaaaatgtgaagccttgctgcaagatgaacctaataattat
atggcttatttactattaggagcggcctatcaaaatagcaataaagaccaggcggcaaag
tatttacgtaaagcggttgagttttcaccagctgcaccaactgttgcgctacagggttta
gctaactgcgctccactgaatgagttgcccaaaatttatgagcaattgttagatttagta
cctgaaaagagtagttattattttgagagactttacgtcgcaggaatcaacaacaggtgt
gtaggcgaagaatgttttaacattttgaagagtgaatttaaacgaaatgatcaagatgta
gaacgtaggaaatatgtattgaaatatttagcgcagctttgggtgcattttgattttgat
gtggtcgaagaggatgaaactacctataaatatgctttggaggagctgatagcagatcct
gatgctgaacagtatttaaatgcatacaaacgttatcttaaacttctatataaaaagggt
gattacacaaactgcataaaacatgcttgtgcagttaccgaaaaatacccccacgatatt
tacgcttatgagtgggtgtgcaaaatttactgtgaatgccgtgaagtggctacggaatgc
ctaaataatcaaaatcaaaatattgaacagtatgtagcggcattgttacagctgaataaa
aatgctagtttagggctacttatcaaagcaatcgaattttatgagcagcgacaatttgta
gcagcgcgagatttgctatatcgggttcgtgagttgcaaccgacatacacgattgcgttg
gagttgttggcgcgcgtagaaatggtgattggtgtttggagcatggctttgtcaatatgg
tgtaaaattggaaaaaagaattctgttgaacatgccctgtgtttgtcccatgttagcaac
gaaaaggcacaattacgagaaactactgaaatgttacaaaaatttgaccaaaatgaagat
gtaatggcagttttagctaggtgttattttaagcttggttatatagaccaattaaagaca
ttgcagttaagcatactgcagcaagcagagtttctggagacgcctgaagctgctattgac
ttattgcaaagctgcgcggatacagagtcattcgaaacactttttttactatccaaattg
cacttgcaattgtctcattatgccaccgctttgaattgtatgctcaaagcgacacgcttg
caaccatattgcgctgaatgcttccactatctcgggaaaatctactatattacgaaggat
attgtgcgtgcgcgtaaatgtttcgaaaaatgtgttagtttaaatcctttgtgcgaggat
gcggtgaataatctaagcgctatttatcagcaattggctgaagaggatttgaacgcggca
ttgttgcttaacactcttcaacatatggaatttaatgattctaagcgtatacattacaaa
ttaggcctgcatttttttaatgttaacaaatgggatgatgctatccaatcatttcgcact
gctataaagctcgatgtcagttgcatgcattattgggaatctctgggtgatgcgtatgca
gagcgcggttcctataattctgccatacgcgtttttcaaaaaatactagaaatgaatcca
cacaatatttacgcaaaattgcaaattgcattgatcaaatcgactgtgcgcatgtatccc
gaagctatagccgaattcgacgaattgctacgaactcatcccgattatttgcctggtcta
aagggggctgctgaagcacacattggtttggcgaacaatctaaagctggaacatctatac
ggacgttgtaaatatcatttacagatggctgttaatcatttacaacgtgcttttctatcg
ctaaacgataacaacatgttttggctatggcgtcttaccgctaatgtatttgtacaaacg
tcgcgcatgcccagctcattggcttacttagaggtgtcggggaaactggcgaaattagag
gacgaaacagcgattttgtcaagaaaagacctgttcatattagcggcaagattttacact
tgtgccattaaattgaaatcaaacacatttatttggtatgaatttgccctatgttgttat
tattgcgctgtttacgtgcctgatgtagcagtcactcaattggaattggcaaccaaagct
tgtaaaatggctatacatgaacaaagtgaccgttggcaaaattggaatttgctgggagta
ataaatttgcataatgtaataaataacttggctttggcgcagcattgtttcatacaggca
ctaacactagaacgtaaatcgtatatgtcatggacaaatctgggcgcactttatttaaag
cttggcgaaataaaacttgcaaatcaggcttttcagagagcacagcagtccagtcctata
tatggaaatgcttggattgggcaggctatgatagctgaagcaatcggtgaagaagaggaa
gcattagatctcttcagacattgtcagcagtttgaatatcaccctgagtccgcacttggt
tacgcccactgggtgtgtacggtgttggctgatccacaaaagtgtgaaattacacattac
cgacatgccataaacagcatgtatgcggacgtggtggcattggacgcaattaattggtac
gttgtgaatgaggaaaaggatgcaacacttgccgcactttcgttccagggctttttaaat
ttacaacaaaagcattatcgtccggcagagcgggcatatcttcaagctgttgaatcgaca
gtagcaacaactaatgaacagcgtgataaactactaacaaatttgggttatctttattta
aaaatgaatcggccgaatgatgcaataaatgttttcaatcgagtgacacacgcgtcgtta
aaggccataattgggttggccctggctttcgttcgcgctggtcagcaccaggaagcatat
tcgttgtataactctgtattgaagagtttggtggctgataatgaggacaaagcgggaatg
atattagtagcaatggcggcaatggtttacgcctcgcaaggagaagcggatactaaaacg
attctatatcaatgcattctgctcaagaactctcctatccaggctctatattcagcgtgt
gctttgggtattctacacgacgataatcaactaacaatgactatattgacagagctaaag
aagtacgaaaatagtgaagttcactctgggcatattgcatatttgacggcacaacactat
gtagccactaaaaaaacacgcaaaggtctaacatatctactatcacgtgtgcatgtattc
ccacattgtgcagagctgcgaaaagttttggccgattttctgctgaacaattttagtcat
gcctcgcaatatcatgtagctaccagtcaaattgccttgagttcaattagtttgtcgcat
cgtaataaggcccaaaaaagcgactgtattgaggactctaaatcgttattgatagccagt
cgcgcattaaaacctgtagacaaattgcgctcgttaaaactgatacaacatgccatacgc
ctacatccgcaaaatcagaacgcttggctggcgctacaggaagtttattaa
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