Anastrepha ludens (Mexican fruit fly): 128866674
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Entry
128866674 CDS
T10909
Name
(RefSeq) ATP-dependent RNA helicase DHX15 homolog
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
alud Anastrepha ludens (Mexican fruit fly)
Pathway
alud03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
alud00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128866674
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
alud03041
]
128866674
03009 Ribosome biogenesis [BR:
alud03009
]
128866674
Enzymes [BR:
alud01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
128866674
Spliceosome [BR:
alud03041
]
Complex A
U2 snRNP components
U2 related factors
128866674
Complex B
128866674
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
128866674
Ribosome biogenesis [BR:
alud03009
]
Eukaryotic type
90S particles
Helicases
128866674
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
HA2_N
Helicase_C
DEAD
AAA_19
AAA_22
SRP54
nSTAND3
ResIII
Flavi_DEAD
AAA_25
Cas3-like_C_2
AAA_30
ABC_tran
ATPase
AAA_7
T2SSE
PhoH
HTH_IclR
Motif
Other DBs
NCBI-GeneID:
128866674
NCBI-ProteinID:
XP_053963554
LinkDB
All DBs
Position
6:116336819..116343539
Genome browser
AA seq
729 aa
AA seq
DB search
MSKRRIEVGETYNTKSKKEFDVSATSFNNTAAAAPVAGAVASASRQPGNVNPYNLKPFTQ
RYFNLYKKRITLPVFEYQADFMRLLNEHQSIVLVGETGSGKTTQIPQWCVEFATSKGKKG
VACTQPRRVAAMSVAQRVSEEMDVSLGEEVGYSIRFEDCSSAKTVLKYMTDGMLLREAMS
DPMLEQYQVILLDEAHERTLATDILMGVLKEVIRQRNDLKLVVMSATLDAGKFQQYFDNA
PLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEDIEGDILMFLTGQEEIEEACK
RIKRETDNLGSDIGELKCIPLYSTLPPNLQQRIFEPAPPRNANGAIGRKVVVSTNIAETS
LTIDGVVFVIDPGFAKQKVYNPRIRVESLLISAISKASAQQRAGRAGRTRPGKCFRLYTE
KAYKNEMQDNTYPEILRSNLGTVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLA
ALDDDGNLTDLGAVMSEFPLDPQLAKMLIASCQHNCSNEILSITAMLSVPQCFVRPNEAK
KAADEAKMRFAHIDGDHLTLLNVYHAFKQSSEDPNWSYENFINFRSLKSADNVRQQLARI
MDRFNLKRSSTEFTSKDYYVNIRKALVQGFFMQVAHLERTGHYLTIKDNQNVQLHPSTCL
DHKPDWVIYNEFVLTTKNYIRTVTDIKPEWLLTLAPQYYEMTNFPQCEAKRQLEMLQQRL
ESKQYQKGF
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaagacgcatagaagtgggcgagacctataatacgaagtcgaaaaaagaattc
gatgtgtctgcaacctcatttaacaacaccgctgcagcagctcctgttgctggtgcggta
gctagcgcctcacgccagccgggtaatgtaaatccctacaatttgaagccctttacgcag
cgctatttcaatctctacaagaagcgcatcactctaccagtatttgaatatcaagcagat
tttatgcgcctattgaatgaacatcaatctattgttttggtcggtgaaaccggttccggc
aaaaccacacaaataccccaatggtgtgttgaatttgctacgtccaaaggtaaaaaaggt
gttgcatgtacacaaccacgtcgtgtggccgctatgtctgttgcacagcgtgtttcagag
gaaatggatgtgagccttggtgaggaggtcggctactctatacgttttgaagactgctca
tcagcaaaaacagtgcttaagtatatgacggacggtatgctgttgcgtgaagccatgtcg
gaccctatgttggaacagtatcaagttatattacttgatgaggcccacgaacgtactttg
gccacagatattttaatgggtgttttaaaagaggtcataaggcaacggaatgatctaaaa
ttagtggtgatgtcagctactttagatgcaggcaaatttcaacaatatttcgataatgca
cctttgatgaatgtgccgggtcgtacacatcctgtcgagattttctatacacctgaacca
gaacgtgactacttagaagcagccatacgcactgttatacaaattcacatgtgcgaagat
attgaaggtgatatattgatgtttttaactggtcaggaagaaatcgaagaggcatgcaag
cgtataaaacgtgaaacagacaacttgggctccgatataggcgaactgaaatgtattccc
ctctactccactctgcccccaaatttacaacaacgtatttttgagcctgcaccaccgcga
aatgccaatggtgcaatcgggcgcaaagtagtcgtttctaccaatattgctgaaacttca
cttacaattgatggtgtcgttttcgtgattgatccgggctttgcaaaacaaaaagtctac
aatccacgtatacgagtggagagtttgcttatttcagcaatttcaaaggcttcagcacaa
caacgcgctggtcgtgctgggcgtacacgcccgggcaaatgtttccgcttgtacacggag
aaggcgtataaaaacgaaatgcaggataatacatatcctgaaattttgcgctcaaatttg
ggcactgtggtgttgcaactgaagaaactcggtattgatgatttggtgcactttgatttc
atggatccgcctgcgccagagacacttatgcgtgcactggaattgcttaattacttggct
gcgctggatgatgatggcaatcttaccgacttgggtgcagttatgtctgaattcccattg
gatccgcagttggctaaaatgttgattgccagctgtcaacataactgctcgaatgaaata
ctttccataacggctatgctgtcggtgccacaatgctttgtgcgcccgaatgaggctaag
aaggctgcagatgaggccaagatgcgctttgcacacatcgacggtgatcacttgacacta
ctgaatgtctaccatgctttcaaacagagtagcgaagaccccaattggtcttatgagaat
ttcataaatttccgttcgttgaaatcagccgataatgtgcgtcaacagcttgcgcgtata
atggatcgtttcaatttgaagcgcagcagcaccgaattcacatccaaagattattatgtc
aatatacgtaaagcgttggtgcagggcttcttcatgcaagtggcgcatttagagcgcacc
ggtcactacttgaccatcaaggacaatcaaaacgtacagttacatccatccacttgcctg
gaccacaaacccgattgggtcatctataacgaatttgtgttgactacgaaaaattatata
cgcacagttacagatattaaaccggaatggttgctcactttagcgccgcaatactacgaa
atgacaaactttccacaatgcgaagctaaaaggcaactagaaatgctgcagcagcgtctg
gagtcgaagcagtatcaaaaaggattttag
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