Anastrepha ludens (Mexican fruit fly): 128866905
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Entry
128866905 CDS
T10909
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 4
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
alud Anastrepha ludens (Mexican fruit fly)
Pathway
alud03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
alud00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
128866905
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
alud03021
]
128866905
03019 Messenger RNA biogenesis [BR:
alud03019
]
128866905
Transcription machinery [BR:
alud03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
128866905
Messenger RNA biogenesis [BR:
alud03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
128866905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
zf-CCHC
Torus
zf-CCCH_3
zf-CCCH_4
zf-CCCH_2
zf-CCHC_3
Nab2-like_zf-CCCH_
Motif
Other DBs
NCBI-GeneID:
128866905
NCBI-ProteinID:
XP_053963921
LinkDB
All DBs
Position
6:126716246..126717384
Genome browser
AA seq
292 aa
AA seq
DB search
MEILLANVSNIDFKIEKDLVEQIGAIALPFFGMDKSMAAVCQFVSSQNGIECEKGSSCPF
RHIRGDRTIVCKHWLRGLCKKGDQCEFLHEYDMKKMPECYFYSRFNACHNKECPFLHIDP
ESKVKDCPWYDRGFCRHGPHCRHRHVRRVLCSNYLAGFCSNGWSCKFMHPRFELPPISDM
TKELLLKKVPTCHFCGELGHKASACKKNPDANEANENRFKYGSFQKPSQNFSFKENSEIK
NNADHVSSSNNFTKVPKPLDEITCYKCGNKGHYANKCPKGHLAFLSNQRSHK
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atggaaattttactagcaaatgttagtaatattgattttaaaatcgagaaggatttagtt
gaacaaattggcgctattgctttgccatttttcgggatggacaaatcaatggctgccgtt
tgtcagttcgtaagctctcaaaatggaattgagtgtgaaaagggttcatcttgcccgttt
cgtcatattagaggagacagaactattgtatgcaaacattggcttcgcggactatgtaaa
aaaggagaccaatgtgagttcttacacgaatatgacatgaaaaaaatgccagaatgctac
ttctattcgcgtttcaatgcttgtcataataaagaatgccccttcctgcatattgatccc
gaaagtaaagtaaaagattgcccctggtacgaccgagggttttgcaggcatggaccccat
tgcagacatcgtcacgtacgtcgcgtgctttgtagtaattacttagctggattttgttct
aatggctggagttgtaaatttatgcatcctcgttttgaactacctccgatttctgacatg
actaaagaattgcttctgaaaaaagtgcctacgtgtcatttttgtggtgaattgggtcac
aaggcttcggcgtgtaaaaagaatcctgatgctaacgaagccaatgaaaatcgattcaaa
tatggcagttttcaaaaacccagtcaaaactttagctttaaggaaaactctgagattaaa
aataatgctgaccatgtgtcgtccagtaataactttaccaaggtaccgaagccgttagat
gaaataacttgctataaatgtggaaacaaggggcactatgccaacaaatgccctaaaggt
catttagcgtttttatcaaatcaaagaagtcacaaataa
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