Anastrepha ludens (Mexican fruit fly): 128868762
Help
Entry
128868762 CDS
T10909
Name
(RefSeq) general transcription factor IIH subunit 1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
alud Anastrepha ludens (Mexican fruit fly)
Pathway
alud03022
Basal transcription factors
alud03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
alud00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
128868762
09124 Replication and repair
03420 Nucleotide excision repair
128868762
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
alud03021
]
128868762
03400 DNA repair and recombination proteins [BR:
alud03400
]
128868762
Transcription machinery [BR:
alud03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
128868762
DNA repair and recombination proteins [BR:
alud03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
128868762
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_TFIIH
BSD
Motif
Other DBs
NCBI-GeneID:
128868762
NCBI-ProteinID:
XP_053967211
LinkDB
All DBs
Position
6:32602274..32605739
Genome browser
AA seq
599 aa
AA seq
DB search
MTTSSEDVLLQMGEVRYKKGDGTLYVMNERLAWMAENRDTVAVSHRFADIKMQKISPEGK
PKVQLQVVLHDGNSSTFHFVNRNGQQAMLADRDKVKELLQQLLPNFKRKVDKELEEKNRI
LSENPNLLQLYKDLVITQVLTSEEFWATHAKEHAMKKINKKQDIGVSGAFLADIKPQTDG
CNGLKYNLTPDIILCIFKTYPAVKRKHQENVPAKLTESEFWTKFFQSHYFHRDRITAGSK
DIFTECGKIDDQTLKAAVQQGAGDPLLDLKQFEDVPLEEGFCSVAGDRNVSNSGNIVHQN
MIKRFNQHSIMVLKTCADVAGSSTSTANGPAKMKDPKANEHSAVNGGAEKSKHAKDGKSN
SGDANSTNNATLNGIAASPDRPAKRQRIMEKIHYEDLGDPLIEAAYEADASKKFKKPQQL
SLAKEERYLHGPLPITGYDMHEDPRRMEEVQYHLMRATETWTQRTPHKVLVSPTAAVNAL
GELSPGGALMRGFHEQSVGQLVPKDFEKDLRNLYLSLSELLKHFWNCFPPTTAEAEEKAV
RMHEAVQRFKMAKLVPFESRALHELSPLGASLTQHLNRLLQSANTKFATWQERKMRQHR
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgacgaccagcagtgaggatgtgttgctgcaaatgggtgaggtgcgttacaaaaagggc
gacggcactctatacgtaatgaatgagcgccttgcatggatggcggaaaatcgcgatact
gttgcagtatcgcatcgctttgccgacattaaaatgcaaaaaatatcgcctgagggcaag
ccgaaggtgcagcttcaagttgtgctgcatgacggtaatagttccacattccattttgtc
aatcgtaatggacagcaagcgatgctggccgaccgtgataaggtgaaggagttattgcag
caactattgccgaattttaagcgtaaagtcgataaagagttggaggaaaaaaatcgtata
ctttccgaaaatcctaatctcttgcagctgtataaggatttggttataacgcaagtgctc
accagtgaagagttctgggctacacacgccaaagagcatgccatgaagaaaattaacaaa
aaacaagatattggtgtatctggcgcctttcttgctgatataaaaccacaaaccgatggt
tgtaatgggttgaagtacaatttaacccccgacataattctgtgtatttttaaaacttat
cccgccgtaaaacgaaagcatcaagaaaatgtgcctgccaagttgacagagtcggaattc
tggacaaagttttttcagtcgcactactttcatcgcgatcgcataacagctggctctaaa
gatatatttacagaatgtggcaaaattgacgatcaaacgttgaaagctgctgttcagcaa
ggcgcaggcgatcctttactcgatctgaagcagtttgaggacgtgccactggaggagggt
ttctgtagtgttgctggggaccgcaatgtctcaaatagtgggaacatagtgcatcagaat
atgatcaagcgtttcaatcagcactcgataatggtgcttaagacttgcgccgatgtcgct
ggcagctctacttcaactgccaatggaccggctaaaatgaaagacccgaaagccaatgaa
cactcggccgtaaatggcggtgctgaaaaatcaaaacatgcaaaagacggcaaatcgaat
agtggcgatgcaaattcaacgaataatgccacgctcaacggaattgctgctagtcccgat
cggccggccaaacgccaacggatcatggaaaaaatacactacgaagatcttggtgatccc
ttaatagaagcagcctacgaggctgatgctagcaaaaaatttaagaagccacaacaatta
tcactagccaaagaggaacgctatttacacggccctttgccaatcactggctacgacatg
catgaagacccacgacgcatggaagaagttcaataccatctaatgcgtgctacggaaact
tggacgcagcgcacaccgcacaaagttttggtcagcccaacggcagcggtcaatgcgctc
ggcgaattgagtccgggtggcgcgcttatgcgtggcttccatgagcaatcggtcggccag
ctggtgccgaaagactttgaaaaggatttgcgtaatttatatttgtcattgtcagaattg
ctgaaacatttctggaattgtttcccaccaaccaccgccgaagccgaagaaaaggctgtg
cgcatgcacgaggcagtgcaacgcttcaaaatggctaaacttgtgccgttcgagagtcgc
gccttgcatgaattgtcgccactgggcgcttctctaacgcagcatttgaatcgtttgttg
cagtcggcaaacacaaaattcgccacttggcaagagcgcaaaatgcgccagcataggtag
DBGET
integrated database retrieval system
