Anastrepha ludens (Mexican fruit fly): 128871532
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Entry
128871532 CDS
T10909
Name
(RefSeq) poly(U)-binding-splicing factor PUF60
KO
K14411
RNA-binding protein Musashi
Organism
alud Anastrepha ludens (Mexican fruit fly)
Pathway
alud03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
alud00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
128871532
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
alud03019
]
128871532
Messenger RNA biogenesis [BR:
alud03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
128871532
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
PHM7_cyt
Nup35_RRM_2
DDHD
C2orf69
NID
CCSAP
Motif
Other DBs
NCBI-GeneID:
128871532
NCBI-ProteinID:
XP_053969331
LinkDB
All DBs
Position
2:57079608..57096596
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AA seq
612 aa
AA seq
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MLQHHPHTIPLGAAARIKEETTSNQPFFFAHSNPIDNAAAAAAAAAAGLIDHQHRDLHTA
LVNVAAVNGTLSNTTAAVLKSQSVQQQQQNNAAQQTAQAQAQAAVAAAAAAAAAQAQQQQ
SQQNTVNNNASAQQQQQQQQSQQNAMVLLNGNAGTAVGGNNGTANGVVKTSSSGRSTPVN
GSSTTDPAPGKLFVGGLSWQTSSEKLKEYFNVFGTVTDVLIMKDPVTQRSRGFGFITFQE
PCSVDKVLQVPIHTLDGKKIDPKHATPKNRPRQANKTKKIFVGGVSQDTSADEVKAYFNQ
FGTVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPKEAVT
PAAAQLLQKRIMLSTLGVPIPTAPGQLIGTRAGVTTMSSLAMLQAPSTLQLHAASGAAAA
AAAQQAALISQSPFQVQNAAAAAAVAANPASFGKLLTTYPQALHSVRYAPYPIPTSAAAA
NALVQAQQQHVAAQQQQHANAAAAAQQQHTAHAAAAAAAQQHNAANTQNVAAAQNAHNAL
AVAGPAAGASAHGAQAAHHPLAAAAAQQAALVAGNPLSAAANPYQSYTLTNVDMSSFQGV
DWSQVYGMGMYV
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgttacaacaccatcctcatacaatcccccttggtgctgcggcacgcattaaggaagag
accacaagcaatcaaccgtttttctttgctcacagcaacccaattgacaacgctgctgca
gcagcagccgcagccgctgctggactcatcgaccatcaacatcgtgacctacatactgcg
ctggtcaatgtagccgctgtaaatggtacattgtccaatacaacggccgctgttttgaaa
agccaatcggtgcaacaacagcaacagaataacgctgctcaacagaccgctcaagctcaa
gcacaagcggcagtagcagccgccgccgcagcagcagcagcacaggcgcaacagcagcag
tcacagcagaatacagtaaataataacgcttccgctcagcagcagcaacaacaacagcaa
tcgcaacagaacgccatggtgctgttaaatggtaatgctggaacagctgttggcgggaat
aatggtactgccaatggtgttgtgaagaccagctcatcgggtcgttcgacgccagtaaat
ggtagctccactacagatccagcaccgggtaaactcttcgttggcggtcttagctggcaa
acatcatcggaaaagctaaaggaatacttcaatgtgttcggcaccgtaaccgatgtgctg
atcatgaaggatcccgtgacacagcgcagtcgcggtttcggtttcatcacattccaagag
ccctgtagcgtggacaaggtcctacaggtgcccatacatacactggatggcaagaaaatc
gatcccaagcatgccacacccaagaatcgcccacgtcaggctaataagacaaagaagatt
tttgttggcggcgtctcgcaagatacttccgccgacgaggtgaaagcctatttcaatcag
tttggcaccgtcgaagagacagtcatgttgatggatcaacaaacgaaacgtcatcgcggt
ttcggttttgtcacattcgagaacgaggatgtcgtggatcgtgtttgtgagatacatttc
cataccattaaaaacaagaaggtcgaatgcaagaaagcccaaccaaaggaggctgtcact
ccagctgccgcccaattgctgcagaaacgtattatgctgagcacactaggcgtgcccata
ccgaccgcaccgggccagttgattggcacacgcgcaggcgtcaccaccatgagttcatta
gccatgttgcaagcgccgtcaacattacaattgcacgccgccagtggcgctgctgccgcc
gccgctgcacaacaggctgcgctcatctcgcagtcacccttccaagtacaaaatgccgcc
gccgctgctgcagtagccgccaatccagctagctttggcaaattgcttaccacatatcca
caggccttgcacagcgtcagatatgcaccctatcccattcccacgagcgctgctgccgcc
aatgctttggtgcaggcgcaacagcaacatgttgcggcacaacagcaacagcatgcgaat
gctgccgccgccgctcaacagcaacacactgcccacgctgccgccgccgctgcagcacag
cagcataacgccgccaacacacaaaatgtggccgccgcacagaatgcacataatgcgctc
gccgtcgccggtcccgccgccggagcgagcgcacatggcgcacaagcggcacatcaccca
ctggcagctgccgccgcacaacaggcagcactcgtcgctggcaatcccttgagtgcggct
gccaatccatatcagagctatacgctaaccaatgtagacatgtccagctttcagggagtc
gactggagccaagtgtatggcatgggcatgtacgtctaa
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