Anastrepha ludens (Mexican fruit fly): 128871662
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Entry
128871662 CDS
T10909
Name
(RefSeq) symplekin
KO
K06100
symplekin
Organism
alud Anastrepha ludens (Mexican fruit fly)
Pathway
alud03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
alud00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
128871662
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
alud03021
]
128871662
03019 Messenger RNA biogenesis [BR:
alud03019
]
128871662
Transcription machinery [BR:
alud03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
128871662
Messenger RNA biogenesis [BR:
alud03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
128871662
U7-dependent histone pre-mRNA processing factors
128871662
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Symplekin_C
SYMPK_PTA1_N
Adaptin_N
Cnd1
HEAT_2
Motif
Other DBs
NCBI-GeneID:
128871662
NCBI-ProteinID:
XP_053969576
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All DBs
Position
2:complement(65764372..65768966)
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AA seq
1175 aa
AA seq
DB search
MEGLLGRSQFLGEAVNLFTDEKTANARSKVIEWLNEVPTAESMTKCDLLVKVQETILGSC
VELLEEFSEHILSLAHDANADVRKQVVCFIEQICKVKVELLPQVISVISMLLRDRSPQVI
KRVIQACGSIYKNGLQWICATGEISDSAEQAWSVLSLVKAQILDLIDNENDGIRTNAIKF
LEGVVVLQSYPDEDSQKKDNDFSLEDVPINFRLVKRQKLEEEALNIFDILLKFHAATHIS
SVNLITCTGSLCTIAKLRPSLMGPVVDAFKQLNSNLPPTLTDSQASSVRKSLKMQLMALL
KNRGSYEYQASIRHMLLDLGASQGEIQRAVPKMDKQEQTRRQKRILEGATSSLNKKMRLD
SINRQQERRAKSGVDDEIAKEIEMEVDEEELEKQRQRCLRVNEKFLAEQLRATDVVVNLV
VEFLPKLPDEVPDHFLNEYAPIRDMSIQQQVTKIAKFLGEQMTTQKVGPGAAAFSKEIPL
RPRRMETMDTKESEQPIDEDQMRKDEATKKLRENMERVKGEQELIERMKLRAKTLKLQEV
TKQFSRPVKEKFLLEAVKHVLQSERQCIVGGVSAKRRKILTVMAATFPDKVRYFIFDFIM
LDVRQRIDLAFSWLYEEYCLLQGFTRHSYVKSENRPDYAYNELLSQLIRGVRETCELKDK
IILMRRIFLEAPLLPDDALNQLVEMCFSEEFVNPGMDLLKDLAVMRPPRKNKLIRVLLMF
SVHERTDLRERALDHIVTLYHIHKVLPNRIEEFALEWASHLEKEVPPPGIFTEEYGRPET
EAGWKEETVKTCMTPMLTLLPYKPKTFLDKLCNIYTHTGADLKRTILRSIDPTIKKMGAE
DPTLLKFIEDCPKGTETLVIRIIHLLTERVATPNPELVQRVRELYANKIRDVRVLIPVLS
GLSRQEVLNSLPKLLKLNQIVVKEVFNRLLGIGAEFANQTMAATPTDILVALHTMDTNVC
DLKAVVKATSICLAEKDVFTQEVLIGVLQQLVEVVPIPTLLMRTIIQSITLYPRLTNFVL
NLLQRLILKQVWRQKVIWEGFLKCCQRLKPQSLPVLLHLPNQQLVGALEQCPDLRQPLFE
YAQSIQEEPMSGITPQLLDIISGKTVDVFITDESGGYISVDQIKKEIEDPSEIGVIATIP
IAPVPAPVPAPIPTLGGIGTPILSTTAQPLPPGED
NT seq
3528 nt
NT seq
+upstream
nt +downstream
nt
atggaggggcttttaggacgcagccaatttctaggcgaagcagtaaaccttttcacagat
gaaaaaactgcgaatgcacgcagcaaggtaatcgaatggctaaatgaggtgcccaccgct
gaatctatgaccaaatgcgatttgttggttaaggtgcaggaaactattctgggctcatgt
gtggagctgttggaagaattttcggaacatatactctcgctagcgcatgatgcaaatgca
gatgtccgaaagcaagtcgtgtgcttcattgagcaaatatgtaaagtcaaggtggagttg
ttaccacaagtgataagcgttatttcaatgcttctacgcgaccggtcgcctcaagtgatt
aagcgcgtcatacaagcatgcggcagcatatataaaaatggcctacagtggatttgtgcc
acaggagaaatatcggacagcgctgaacaagcttggagtgtactaagtttggtaaaggct
caaatcttggatctaattgacaacgagaacgatggcattcgtaccaatgccattaaattt
ctggaaggcgttgtagtgctgcaaagctatccagatgaagacagtcaaaagaaagataat
gatttttcgctcgaagatgtacctataaattttagattagtgaaacggcagaagttggag
gaggaagcgcttaatattttcgatattttgttgaaatttcacgcggctacacacatttct
tctgtgaatcttatcacttgcactggcagtctttgtacaatagcaaaattgcgtccaagt
cttatgggccctgttgtggatgcctttaagcaactcaattcaaatctaccccctacgctc
acagattcgcaggctagttccgtacgtaaaagtttgaaaatgcaattaatggcgttgctt
aaaaatcgtggatcatacgaatatcaggcatcgatacgtcacatgttgttagatttgggt
gcatcacagggtgaaatacagcgcgcggtaccgaagatggataagcaggagcaaacgcga
cgacaaaaacgcatattagagggcgccacaagtagtcttaataagaaaatgcgtcttgat
tccataaataggcaacaggagcgcagagctaaatcaggtgtagacgatgaaattgcaaaa
gagattgagatggaagttgacgaagaagagttagagaaacagcgtcagcgctgcctgcgt
gtaaatgaaaagttcttggctgaacaattgcgagctactgatgtggtagtcaatttagta
gttgagtttttaccaaagttgcccgacgaagtgccagatcatttcttaaatgaatatgca
cccattcgcgatatgtccatacagcagcaagtaacaaagatagcaaaatttctcggcgag
cagatgacaacgcaaaaagttgggccaggtgccgcagcctttagcaaggagattccactg
cgaccacgacggatggaaaccatggacaccaaagaaagtgaacaaccaattgacgaagat
caaatgagaaaagacgaagcaacgaagaaattgcgtgaaaacatggagcgtgtgaaagga
gaacaagagctgatagagcgtatgaagttgcgcgccaagacactcaagttacaagaggta
accaaacaattttcacgtccagttaaagagaagtttcttttggaggctgtaaagcacgtt
ttacaatcggaacggcagtgcattgtgggcggagtgtctgcaaagcgccgtaaaatacta
actgttatggctgcaacatttcctgacaaagtgcgctacttcattttcgattttattatg
ctcgatgtgagacagcgcattgatttggccttttcgtggttatatgaagagtattgtcta
ctgcagggtttcacacgacactcctacgtaaagtcggaaaatcgacccgactatgcttac
aacgagctcttgagccaactgattagaggagtgcgcgaaacatgcgaattgaaggataaa
attatattaatgcgccgtatctttctggaagcaccattgctgccggacgatgcgcttaat
cagcttgtggaaatgtgcttctccgaggagtttgttaatcctggaatggatttgttaaaa
gatttggctgttatgcggccaccgcgaaagaataaactgataagagtgcttctaatgttt
tccgtacatgaacgtaccgatttgcgagagcgagcactggatcatatcgttactctgtat
cacatacacaaagtgttgccgaatcgaattgaagaattcgctttggaatgggcctcgcat
ctggagaaagaagtgccacctcccggcattttcacagaagagtatgggcgaccagagacc
gaagcgggctggaaagaggagacggtcaagacgtgcatgacaccgatgctgacactatta
ccttataagccaaaaactttccttgataaactttgcaatatttacactcacactggagcc
gacttgaaacgaactatactacgctccatcgatccaacaataaagaaaatgggcgccgaa
gatcccacattgcttaaatttatagaagactgccccaaaggcaccgaaacgctcgtcata
cgcattattcatctgcttaccgagcgtgtggccacccccaatccagaattggtacaacgt
gtacgtgagctctatgcgaataaaatcagagacgttcgtgtgttaatacctgtactcagc
ggtctctcgcgccaggaagttttgaattctctaccaaagctgctgaaactaaatcaaatc
gtcgttaaggaggtgttcaatcgcttgcttggcattggcgctgaattcgctaatcaaacg
atggctgccacacctactgatatactcgtcgctttacataccatggatacgaatgtttgc
gatttaaaagctgtagttaaagctacttcaatatgtttggctgagaaagacgttttcaca
caagaagtgctaattggtgtattgcagcagctggtcgaagtagtacccatacctacacta
ctcatgcgtaccataatccaaagtataacactttatccacgcttaacgaatttcgtacta
aatctgctgcagcgcctcatattgaagcaagtatggcggcaaaaagtgatttgggaaggt
tttctcaaatgctgtcaacgcttaaagccgcagtcactgcctgtattgttgcatttacca
aatcagcaacttgtaggtgctttggagcagtgccccgatttaaggcaaccattgtttgaa
tatgcgcagagtattcaggaagaaccaatgagcggcataacacctcaattgctggatata
atttctggcaagacagtcgacgtatttataacggatgagagtggcggttacattagcgta
gatcaaattaaaaaggaaattgaagacccatcagaaattggtgttattgcaacgatacct
attgcaccggttccagcgccagttccagctcctatccctacacttggcggcattggtaca
cctattctctccactactgcacaaccgctgccaccaggcgaagattag
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integrated database retrieval system
