Anastrepha ludens (Mexican fruit fly): 128871795
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Entry
128871795 CDS
T10909
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
alud Anastrepha ludens (Mexican fruit fly)
Pathway
alud03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
alud00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
128871795
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
alud03021
]
128871795
Enzymes [BR:
alud01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
128871795
Transcription machinery [BR:
alud03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
128871795
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
128871795
NCBI-ProteinID:
XP_053969844
LinkDB
All DBs
Position
2:complement(70416963..70423059)
Genome browser
AA seq
1652 aa
AA seq
DB search
MRKGNALEIDMLPADLEFGVFSSEEIKRLSVVKIITGLTFDPLGHPLPGGLYDSLMGTYG
RRMEPCATCYNIQECPGHMGHIELNTLVFNPFFIKLVQKILSIFCLNCFKIQLKVHVCEV
LALQLRLLDAGYIVEAQELEIFKSEVVCQNDENLVKLESGEYVHPRIAAMFELLKKGHSN
VSNNTKTSCGIRSAIVHAAFQRVAFKKCIHCQKPLRNIRYLYRKLIYYITAEEMRNSMPE
ARQSTGQNKSIFADECRKFLRQIYLNYPDLLKLLCPILKLNNSGNSCPVDIFFMDTIAVV
PPKARPPNILHDQILEHPQTAIYRSIIENNAVLRVVIKHLKGLREELPEEAQRVYESTKG
ESPYEKLYNAWQTLQTSVDLLLDITASRDSPSSQGLKQVLEKKEGLIRKHMMGKRVNYAA
RTVITPDPNINVEEVGIPDIFARKLSYPVPVTPWNVAELRKMVMNGPDIHPGANYIQDEK
GYTTLIPADNAAKRESMAKLLFNYPENGIKVVHRHVLNGDVLLLNRQPSLHRPSIMAHKA
RILPGEKTFRLHYSNCKAYNADFDGDEMNAHLPQSEVARAEAYNLVNVANNYLVPKDGTP
LGGLIQDHVISGVKLSIRGRFFNREDYQQLVYQGLSDLRDKIKLLPPTILKPTMLWSGKQ
VLSTIIINLTPEGYSRINLHTQAKINSKHWIVSMAHEAACGALGGGELCESNVIIHKGEL
LTGVLDKQQYGATTYGLIHCMYELYGGQVSTRLLTAFTKVFTTFLQREGFTLGVQDILVT
ADADAQRRKIVKECRKIGDSAVAAALDLDEIPSLDVLVGKMEEAYTKDPKFRVILDRKYK
YLLDRYTNDINRTCLPDGLISQFPQNNLQLMVLSGAKGSMVNTMQISCLLGQIELEGKRP
PLMISGKSLPSFTAFETSPKSGGFIDGRFMTGIQPQDFFFHCMAGREGLIDTAVKTSRSG
YLQRCLIKHLEGLTVGYDMTVRDSDSSVVQYLYGEDGLDILKSKFFNTKFCMQFLALNST
AIIHPNELRSIKDEQTLLRISRHVKKLRKWQNKHNGKLDSLETKRIPSAFANFSANSQAK
GNLDELNPKTGRSMGDEYKQKLWRKADAETKEFYKKLSARCPDPTTSVYKQDNCYGSTSE
RLEKLVEDYMKKYPNSKAAIDDIIYIKNLKALASPGEPVGLLAAQSIGEPSTQMTLNTFH
FAGRGEMNVTLGIPRLREILMLASANIKTPSMDIPIKMNQSKNADKLRIKLNRVTLADIL
QFVKVKTKLVLKPERAHQYILRFQFLPREAYQDDFCVRPKKVLKYMSEVFFKVLFRAAIR
SSKSKKSIIEINEDKVGSNKESNDKDLDEDESRNEVSDHFKKDKSTNGGEVDSSDDENAN
DDDDATGRKFKSRKQDETEYDDPEELEEIKDADDDDEIGVGENEDEEDTGKSDTTDALVE
TVLNNELVQEYTYDKEKHQWCKLTFNLNMKYKKPDISSIIRELASKCVVHQVQNIKRAII
YKGDNDVNLLKTDGINIIEVFKYNDVLDLNRLYSNDIHAIAKTYGIEAAAQVIIKEVTNV
FKVYGITVDRRHLSLIADYMTFNGTFQPLSRKGMEHSSSPLQQMSFESCLQFLKNAAGSG
RIDDLSSPSGRLIVGLPVRNGTGAFELLTKIC
NT seq
4959 nt
NT seq
+upstream
nt +downstream
nt
atgaggaagggcaacgcgttggaaatcgatatgcttcctgcggatctggaatttggcgtg
ttcagcagtgaagaaattaagcgactaagtgtagtcaaaattatcactggcctaacattc
gatccactggggcatcctttgcccggcggtttgtacgacagcttaatgggcacttacggc
cgtcgaatggaaccgtgtgccacttgctataacatacaggaatgtccaggacatatgggt
catattgagctaaataccttagtatttaatccattcttcataaaacttgtacaaaaaatt
ttgagcattttttgcttaaactgcttcaaaattcaattaaaagttcatgtatgtgaagta
ctcgcattacaattgcgccttttagatgcgggatacatcgtcgaagcgcaagagctagaa
atatttaaatcagaggtagtgtgtcaaaatgatgaaaatttggttaaactggaaagtgga
gaatatgtgcacccgcgcatagcagctatgtttgaacttttgaaaaaaggacattcaaat
gtatctaataacacgaagacttcctgtggaatacggtcagctatagttcatgccgctttt
caacgtgtagcttttaaaaaatgtattcattgccagaagccgttgcgtaatattcgctat
ttgtaccgaaaacttatttactacattacagcggaggagatgaggaattcgatgccggaa
gcacgccagtccactggacaaaacaaatcgattttcgctgatgagtgccgcaaatttttg
cgacaaatttatttgaactacccagatttattaaaacttttgtgtcccatattgaagcta
aataatagtggtaatagttgccctgttgatatattttttatggatactatagcagtagta
ccacctaaagcccgtccacccaacattttacatgaccaaattcttgagcatccacaaact
gcaatttataggtctataattgaaaacaacgccgtgttgcgtgtagttataaagcatcta
aaagggctacgagaagagctacccgaagaggcgcaacgtgtttatgaaagtactaaaggg
gaatccccatatgagaagctgtacaatgcatggcaaactctacaaacatcagttgattta
ttgttggatataaccgctagtagagattccccatcttctcaaggccttaaacaagtttta
gaaaaaaaggaaggcctaatacgcaagcatatgatgggtaaacgtgtaaactatgcagct
agaactgttataacacccgacccaaatatcaacgttgaggaagtgggtattccagatatt
tttgcacgcaaattaagttaccccgtaccggtaacaccttggaacgtcgctgaattgcgt
aaaatggttatgaacggtcctgatatccaccctggagccaactatattcaagatgaaaag
ggttatacaacccttatacccgcagataacgctgcaaaacgtgaaagcatggctaaacta
ctttttaattatccggaaaatggaataaaagtggtacatcgtcatgtgcttaatggtgac
gtactcttgctcaatcgccagccgtcacttcatcgaccatcaatcatggcacataaagca
cgcatactgcctggtgaaaagacttttcgtctacattattcgaactgcaaggcatacaat
gctgatttcgatggtgacgaaatgaatgctcatcttccgcaaagtgaagtagcgagagcg
gaggcgtataatttagtaaacgttgcaaacaattatctggtacctaaagacggtacccct
ctgggaggcttaattcaggatcacgttatttcgggtgtaaaattatccatacgcggacgt
ttctttaaccgagaagactatcaacaacttgtgtaccagggtctctcggatttaagagac
aaaataaaactccttccaccaacaattttaaagccgaccatgctttggtcaggaaagcag
gttctttcaacaataatcatcaacttgacaccagaaggatattcaagaataaatttacat
acacaagcaaaaattaattcaaaacactggattgtttcaatggctcatgaagctgcatgc
ggtgctttaggtggcggcgagctgtgtgaaagcaatgttataatccataaaggagagctg
cttactggggtcctagacaaacagcagtatggcgcaacaacttatggtttaattcattgc
atgtatgagttgtatggcggccaagtatcaacgcgtctgttgactgcatttacaaaagta
tttacaacatttttgcaacgagaaggatttacgcttggtgtacaggatattttagtaacg
gctgacgcagacgcgcagaggcgaaaaattgtcaaagaatgtcgtaaaattggcgactca
gctgttgctgctgctttagatttggacgagataccttcgcttgatgtgcttgttggaaaa
atggaagaagcgtacacaaaagatcccaaatttcgtgttattttagatcgcaaatacaaa
tatttgctggatcgttataccaacgatataaatcgaacttgcctgccagatggtctgatt
tcccaattcccacaaaacaatttacaattaatggtgttatccggcgcaaaaggatccatg
gtaaatactatgcaaatctcatgtttgttgggccaaattgaattggaaggaaaacgtcca
ccgttaatgatatctggcaaatcattaccaagcttcacagcgtttgagacgtcgccaaaa
tcgggtggtttcattgatggccgctttatgaccggcatacagccgcaagattttttcttt
cattgcatggccggacgtgaaggactcattgatactgctgttaaaacttcacgttcaggt
tatttgcaacgctgtcttataaagcatctggaggggcttacagttggttatgatatgacg
gtacgtgatagcgatagcagcgttgtgcagtatctgtatggcgaagatggattggatatt
ctgaagtcaaaattcttcaatacaaagttttgtatgcaattcttggcacttaattctaca
gcaattattcacccaaacgaactgagaagtatcaaagatgagcaaacactattgagaatc
tcaagacatgtaaagaagcttcgaaaatggcaaaataagcataatggaaagctcgattca
cttgaaacaaagaggataccctcagcctttgctaatttttcagcaaactctcaagcaaaa
ggcaatttagatgaattaaatcccaagacaggacgtagcatgggagatgaatataaacag
aagctttggagaaaagctgacgcagagacaaaagaattttacaaaaaattgagtgcgcgt
tgtcctgatcccacaacatctgtttacaaacaggacaactgttacggtagtacttctgaa
cgactcgaaaaactagtagaagactatatgaaaaaatatccaaacagtaaagctgcgata
gatgacataatatatataaaaaatttgaaagcattggcctcgccaggagaacccgttgga
ttattagccgcacaatctattggtgaaccttccactcagatgacattgaatacttttcac
tttgccggtcgtggtgaaatgaacgtcacactaggtattccccgcttacgcgaaatttta
atgctagcttctgctaacatcaaaacgccgtcaatggatattccaataaagatgaatcag
tcgaaaaatgccgataaattacgtattaagttgaatcgcgtaacccttgcggacatacta
caatttgttaaggtaaaaaccaaactggtgctaaaacctgaacgtgcgcatcaatatatt
ttacgatttcaatttcttccccgggaagcctatcaggacgatttctgtgtacgaccgaaa
aaggtgctgaaatatatgagcgaggtatttttcaaggtactgtttcgtgctgctataagg
tcctcaaagagcaagaaatctataattgaaataaatgaagataaagtcggtagcaacaag
gaaagcaatgataaagatttagacgaagatgaatctagaaatgaagtcagcgatcacttt
aaaaaagataaatcaacgaatgggggtgaagtggattcatcagatgacgaaaatgcgaat
gacgatgatgacgcaactggtagaaagtttaaatcccgcaaacaagacgaaactgaatat
gatgaccctgaagaattagaagaaattaaagatgctgatgatgatgatgagattggagtg
ggagaaaatgaagatgaagaggatacaggcaaatcagacacgactgacgctcttgtcgag
actgtgttgaacaatgagttggttcaagaatatacttacgacaaagaaaaacatcagtgg
tgcaagctcacctttaatctaaatatgaagtacaagaaaccagatatttcttctataatt
cgagaattggccagtaaatgtgtggtgcatcaagtacagaatataaaacgtgctattata
tataaaggcgacaatgatgttaatttgctcaaaactgacggtattaacattatcgaagta
ttcaaatacaacgatgttttagatttgaatcgcctttattctaatgatatacatgcgatt
gcaaaaacatatggaatcgaagcagcggcgcaggttataattaaagaagtgacaaatgtt
ttcaaggtgtacggaattactgttgatagacgtcatctatcgttaattgctgattatatg
acttttaatggcacttttcaaccactctcccgaaaaggcatggaacattcgtcttcgcca
ttgcagcaaatgtcatttgaatcttgtttacaattcttaaaaaatgcagctggaagcggg
cgtatagatgacctcagctcaccatcaggtcgtttaattgttgggctgccggtgcgaaat
ggaacaggtgcctttgaactgttaactaaaatttgttaa
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integrated database retrieval system
