Anaerohalosphaera lusitana: STSP2_02912
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Entry
STSP2_02912 CDS
T06331
Symbol
rho
Name
(GenBank) Transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
alus
Anaerohalosphaera lusitana
Pathway
alus03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
alus00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
STSP2_02912 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
alus03021
]
STSP2_02912 (rho)
03019 Messenger RNA biogenesis [BR:
alus03019
]
STSP2_02912 (rho)
Transcription machinery [BR:
alus03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
STSP2_02912 (rho)
Messenger RNA biogenesis [BR:
alus03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
STSP2_02912 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
Spore_III_AA
AAA_25
AAA
NACHT
ResIII
ATPase_2
Motif
Other DBs
NCBI-ProteinID:
AQT69716
UniProt:
A0A1U9NQC6
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All DBs
Position
3500499..3502223
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AA seq
574 aa
AA seq
DB search
MAKAENNKPEAKKTAKKKKTRKKKQSAEDTQQAEAQASDQAVEDKAPEEKKASSVKKKAK
ENRGDEMKSEEPTTQETTEEKSDAQNKPEESKSEEKTSEESQPKKDNGQEKGKGRNGGFK
KRDKKQPQGKGKRKKGKKEDESVHQKYERIKKGNLHLKDLQNLAVPELHKMAQETGLQDY
LGLNKQQLIFKLLKERIRKNGLMYGEGVLEVLPDGFGFLRSPAYNYLSSPDDVYVSPSQI
RRFGLRSGHVIAGQIRPPKESEKYFALLRVEAINFQDPDKLSAKPVFRDLTPLHAEKRLL
LETDQKELSTRIIDIITPIGRGQRGLIVAPPRTGKTVLLQKIANAVSTNNEEIKMIVLLI
DERPEEVTDMERKTKEDVEVISSTFDEPASRHCQVAEIVIEKAKRMVEYGEHVVILLDSI
TRLARAYNTEMPHSGKILTGGVDANAMQMPKRFFGAARNIENGGSLTIIATALVDTGSKM
DEVIFEEFKATGNMELHLDRRLMDRRTFPCIDISKSGTRREELLLEPKEMELVYRLRKVL
SEMNVVEAIELLKNRLSKCNTNAEFLMSLNMGSL
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atggccaaggccgagaacaacaagccggaagcaaaaaaaacagcgaagaagaaaaaaact
cgcaaaaaaaagcaatctgcagaggatacacagcaggcggaggcccaggcgtccgatcag
gctgtagaggataaggcgcccgaagagaagaaagcatcttcggtgaaaaagaaggcaaag
gaaaacaggggagacgaaatgaagtctgaggaacccaccacgcaagaaaccactgaagaa
aagtccgatgcacaaaacaagcccgaggagagcaagtccgaagagaaaacctctgaggag
tcgcaacccaagaaggataacggccaggaaaagggtaagggccgtaacgggggctttaag
aagcgcgacaaaaagcagccgcaaggcaagggcaaacgcaaaaagggcaagaaagaggac
gaatcggtccaccagaaatacgagcggatcaaaaagggtaatctgcacctgaaggacctc
cagaaccttgctgtgcccgagctgcacaagatggcacaggagacgggcctgcaggattac
ctcggtctgaataaacagcagctcatcttcaagctgctcaaggaacgtatccgcaagaac
ggcctgatgtacggtgagggcgtactcgaggtactgcccgacggattcggcttcttgcgg
agccccgcatacaactatctgagcagtcctgatgacgtttacgtttcaccttcgcagatc
aggagattcggcctgcggagcggtcatgtgatcgccggccagatccgtccgcctaaggaa
agcgagaagtacttcgcccttctgcgcgtcgaagcgatcaatttccaggaccctgacaag
ctcagcgcgaagcctgttttccgcgatcttacgccgctgcatgccgagaaacggctgctg
cttgaaaccgatcagaaagagctcagcacgcggataatcgacattatcacgccgatcgga
cgcggccagcgtggacttatcgtcgcaccgccaagaactggtaaaacggttctgctgcag
aagatagcaaacgcggtcagtacgaataacgaagaaataaagatgatcgtactgctgatc
gacgaacgtcccgaagaagtgacggacatggaacgcaagaccaaggaagatgtcgaggtt
atcagctcgacgtttgacgagcctgcttcgcgtcactgccaggtggctgagatcgtcatc
gaaaaggccaagcgaatggtcgaatacggcgagcacgtcgtgatactgctcgactcaatc
acacgtctggcgagagcttacaatacagaaatgccgcactcgggcaagatcctgaccggt
ggtgtggatgcgaacgcgatgcagatgccgaagcgattcttcggtgccgcgagaaatatc
gagaacggcggatcgctgactatcattgcgaccgcgctggtagatacgggctcgaagatg
gacgaggttatcttcgaagagttcaaggcgaccggcaacatggagctgcatcttgacagg
cgtcttatggatcgcaggaccttcccatgtatcgacatcagcaagagcggcacgcgtcgc
gaagagctgctgctcgagcccaaggagatggagcttgtttaccgtctgcgtaaggttctc
agcgagatgaacgtcgtagaggcgatcgaattgctgaagaacaggctgtcgaaatgcaac
acgaacgcggaattcctcatgtcgctgaacatgggaagcctgtaa
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