Anaerohalosphaera lusitana: STSP2_03057
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Entry
STSP2_03057 CDS
T06331
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
alus
Anaerohalosphaera lusitana
Pathway
alus03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
alus00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
STSP2_03057 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
alus03021
]
STSP2_03057 (rpoB)
03400 DNA repair and recombination proteins [BR:
alus03400
]
STSP2_03057 (rpoB)
Enzymes [BR:
alus01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
STSP2_03057 (rpoB)
Transcription machinery [BR:
alus03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
STSP2_03057 (rpoB)
DNA repair and recombination proteins [BR:
alus03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
STSP2_03057 (rpoB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_1
RNA_pol_Rpb2_45
Peptidase_M23
Motif
Other DBs
NCBI-ProteinID:
AQT69859
UniProt:
A0A1U9NPL8
LinkDB
All DBs
Position
complement(3666174..3669932)
Genome browser
AA seq
1252 aa
AA seq
DB search
MKFLPVRNFGKIGDATDVPDLVEIQRASYSRFLQENVSPDDRTDSGLEALLREIFPIVSY
DKTAELEFMSYELERPRYTPEQCRELRLTYGYPLKIHCALKRSNADDIAEQGIYLGEMPV
MIGGGEFIVNGAERVIVNQLHRSPGVDFGIESKESGDRILHGCRIIPERGSWIEMSVTRK
DVLVVRIDQSSKIPATTFLRAMSEDMGTTEQIIRLFYDVKSVDTGKLDPSMWSVGPIVDT
ETGEILVEAGCQLGDMVGQIQASSLDKIEVIKRVQDPLILNTIAEDDCENHEDALLKLYV
KLRPGNPAQIDKAKQLFAEKFFDENRYRLGRVGRFRINRKFDQDLAESKMTLRPEDFLNT
MKYIVGLRNGKGEIDDIDHLGNRRLRTIDELAADEIRKGLLKLRRTVQERMSMKSPGDIK
RIADLVNSKSVSSSIEYFFGRGELSQVVDQTNCLSQLTHERRLSALGPGGLNRKRAGFEV
RDVHISHYGRVCPIETPEGTNIGLIVSLGIFSKVDEYGFLLTPYRKVENMKVTDEIAYMR
ADEEMKAVFAPPGMVDPKSNELRKGLVLARKGGDLTQAPREEVDFVDISPKQTVGVSASL
IPFLEHDDANRALMGSNMMRQSVPLLETEPPLVGTGMEEIVAKNSSMVVRATNDGVVTAV
DANKIVVNDTDEYDLIKFQGLNERTCLTQTPRVKLGEEVKAGDIIADGGGTANGVLSLGK
NVCVAFVPFDGYNFEDAIIISERLVKDDVFTSIHIDEFSVDIRETKLGREEFTRDIPNVG
EKVLRNLDENGIIREGTRVGPGDILVGKVSPKSKTELTPEEKLLHAIFGRAGEDVKNDSL
EVPSGFEGTVIKTRRFIRRGGMSDEQKAELKIRMQEYEQEMISKQCALFRRMMREINEQF
GTEIVDPSTLQKAGASDDNDVIEEQIENFQIEWVKPAKLRGQAKDIIEQFWPKIRDLQEE
AKVRLNRMKHGDELPSGVLEMVKVYVATKRVLSVGDKMAGRHGNKGVIAKIMPEEDMPFL
DDGTPVDICLNPLGVPSRMNVGQILETILGWSGKVLGFRANTPVFDGATEDEIQKVTVEA
NDYVRQQMQMFETDKKAPPAGGLRVEVPESLKVQLYDGRTGEPLEQQTTVGFMYMLKLHH
LVDEKIHARATGPYSLITQQPLGGKARTGGQRFGEMEVWALEAYGASYTLQELLTVKSDD
IEGRTKIYESMVKGMNTLEAGTPISFDVLCNEIRGLGLNISLEKKRVGNKPL
NT seq
3759 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttttgcctgtccgtaattttggaaagatcggtgacgcaacagatgtgccggat
ctggtagagattcagcgtgcaagttacagccggtttttgcaggaaaatgtttcgcccgat
gatcgcacagacagcgggctggaagcactgcttcgcgagatattcccaattgtcagctat
gacaagaccgcagagctcgaatttatgagctatgagctcgagcggcctcgctatacacct
gagcagtgcagggaactccgcttgacttacggttacccgctgaagatacattgcgccctc
aaacgctcgaatgcggacgacattgccgagcaggggatctatcttggcgagatgccggtc
atgatcggcggcggcgagttcatcgtcaacggtgccgagcgtgtgatcgtaaatcagctt
caccgcagtcccggtgtggattttggaattgaaagcaaagaatccggcgacaggattctt
catggctgccgaatcatcccagaacgcggcagttggatagagatgtccgtcactcgcaag
gatgttctggtcgtgcgtattgaccagtccagcaagatccctgcgaccacgttcctgcgt
gcgatgagtgaggacatgggaacgacagagcagatcatccgtctgttctatgacgtaaag
agtgtcgatacaggcaagctggatccgtcaatgtggtcggtaggcccgatcgttgatacc
gagacgggcgagatcctagttgaggccggctgtcagcttggcgatatggttggtcagatc
caggccagttcgctggacaagatcgaagttattaagagagtgcaggacccgctgatcctc
aatacgatcgcagaggacgattgcgagaatcacgaggatgctctgctcaagctttacgta
aaactgcgtccgggcaacccggctcagatcgacaaggcaaaacaactgttcgccgaaaag
ttctttgacgaaaatcgttatcgtctcggacgcgtgggcagattcaggataaacaggaag
ttcgatcaggacctggcggaatcaaagatgacgctcaggccggaggatttcctcaataca
atgaaatatatcgtcggcctgcgtaacggcaagggcgaaattgacgacattgaccatctg
ggtaacaggcgtctgcgtaccatcgacgagctggcagccgacgagatccgcaagggtctt
ctcaagctgcgtcgcacggtgcaggaacgcatgagcatgaagagcccgggcgatatcaag
cgtatcgctgacctggtcaactccaagagcgtctcttccagcatcgaatacttcttcggt
cgcggcgagctcagccaggttgtggaccagacgaactgcctttctcagcttacgcacgaa
agacgtctaagtgcacttgggccgggcggtcttaaccgtaagcgtgctggctttgaggtg
cgagacgttcatatcagtcactacggccgagtgtgtccgatcgaaacacctgaaggtacg
aacatcgggctgatcgtttcgctgggtattttctctaaggtcgatgagtacggcttcctt
ctcacgccttaccgcaaggtcgagaatatgaaggtcaccgacgagatcgcatacatgcgt
gcggacgaggaaatgaaagcggtattcgctccgcccggcatggtcgatccgaagagtaac
gaacttcgcaagggtctggtactcgctcgaaagggcggtgaccttacgcaggctccgcgc
gaagaggtagattttgtagatatttcgccgaagcagactgttggtgtgtcggcatcgctg
attccgtttttggagcatgacgatgctaaccgtgctctgatgggatcgaacatgatgcgt
cagtccgtgccgctgctcgaaaccgagcctccgctggtcggaaccggcatggaagagatc
gtcgcgaagaattccagcatggtcgttcgtgcgaccaatgacggcgtcgttacggctgta
gatgccaacaagatcgtcgtcaatgacactgatgagtacgatctgatcaagttccagggc
cttaacgagagaacctgtcttactcagactcctcgcgttaaactgggcgaagaggtcaag
gctggcgatatcatcgcggacggcggcggtaccgctaacggcgtgctttcgcttggtaag
aatgtctgcgtggcatttgttccgttcgacggctacaactttgaggatgcgatcatcatc
agcgaaagactggtaaaggatgacgtcttcacaagtattcacattgatgagttcagcgtc
gacatccgcgagacaaagctcggccgtgaggaatttacgcgagatattccaaacgtcggc
gagaaggtcctgcgtaacctggacgagaacggcatcatccgcgaaggtacccgcgtaggg
cccggcgatattctcgttggtaaggtttcgccgaaaagcaagaccgaacttacgccggaa
gaaaaacttctgcatgctatcttcggccgggcgggcgaggacgtgaagaacgattcgctc
gaggttccaagcggttttgaaggtacggtcatcaagacccgcaggttcatccgtcgcggc
ggcatgtccgacgagcagaaggcagaactcaagatccgcatgcaggaatacgagcaggaa
atgatctcaaagcagtgtgctctgttccgccgcatgatgcgtgagataaacgaacagttt
ggcaccgaaattgtcgacccgtcgacactgcagaaggccggtgcaagcgatgataacgac
gtcatcgaagagcagatcgagaacttccagatcgagtgggtcaagcccgctaagctccgc
ggccaggccaaggacattatcgaacagttctggcccaagatccgcgatctgcaggaagag
gcaaaggtacgactgaaccgcatgaagcacggtgacgagctgccaagcggtgttctggaa
atggtcaaggtttacgttgccaccaagcgtgtactttcggttggtgataagatggctggt
cgccacggtaacaagggtgttatcgccaagatcatgcccgaagaagatatgccgttcctg
gacgacggaacaccggttgatatctgtctgaatccgctcggcgtacccagtcgtatgaac
gtcggtcagatcctcgagacgatcctcggctggtccgggaaggttctcggcttcagggcc
aatacgcctgttttcgatggtgctaccgaagacgagattcaaaaagtcacggtagaagcc
aacgattatgtccgacagcagatgcagatgttcgagacggacaaaaaggctccgccagcc
ggaggtctgcgagtcgaagtgccggaaagtctcaaggtccagctttatgacggccgaact
ggtgagccgctggaacagcagacaacggttggatttatgtacatgctgaaactgcaccac
ctggtggacgagaagatccacgctcgtgcgacaggcccatacagcctgatcacgcagcag
cctctgggcggtaaggccagaactggtggacagcgtttcggtgaaatggaagtttgggct
ctggaagcatacggagcttcatatactctgcaggaattgctgactgtcaagagtgatgat
attgaaggtcggaccaagatctatgaatcgatggtcaaaggtatgaatactctcgaagcg
ggcacaccgatctcgttcgatgtgctttgtaacgagatcaggggccttggcctgaatatc
tcactggagaaaaagcgggtaggcaataagcctctgtaa
DBGET
integrated database retrieval system
