Algibacter luteus: O5O44_03235
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Entry
O5O44_03235 CDS
T09147
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
alut
Algibacter luteus
Pathway
alut03030
DNA replication
alut03430
Mismatch repair
alut03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
alut00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
O5O44_03235 (dnaE)
03430 Mismatch repair
O5O44_03235 (dnaE)
03440 Homologous recombination
O5O44_03235 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
alut03032
]
O5O44_03235 (dnaE)
03400 DNA repair and recombination proteins [BR:
alut03400
]
O5O44_03235 (dnaE)
Enzymes [BR:
alut01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
O5O44_03235 (dnaE)
DNA replication proteins [BR:
alut03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
O5O44_03235 (dnaE)
DNA repair and recombination proteins [BR:
alut03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
O5O44_03235 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
RNase_T
tRNA_anti-codon
Intimin_C
HHH_3
IF2_N
Motif
Other DBs
NCBI-ProteinID:
WJJ97399
LinkDB
All DBs
Position
754240..758628
Genome browser
AA seq
1462 aa
AA seq
DB search
MYLIFDTETTGLPKRWDAPITDTDNWPRCIQIAWQLHDAMGNCIESQDFLVKPEGFNIPY
DAEKIHGISTELAQEQGISLAEVLEKFNEALGKTKFVVGQNVKFDLNIMGAEFVRGNVEN
PLQELPVLDTCTEHTAEMCQIPGGRYGKFKLPTLTELHEFLFNEPFDEAHNATADVEATT
RCFLELIRLGEFTKEELDVQPDYFENFKKENPESIQLIGLKHINLKKESAKIRERIKKAQ
TSTISSEEIKQNVGELADVDFVHLHNHSQFSVLQSTMSVADIVAAAAEHNMPAVALTDHA
NMMGAFHFVNAVNRVNSGIKAKIAEAEEKGETPTAKLIKPIVGCEFFVCDDHEDKTRKDN
GYQIVLLAKNKNGYHNLAKLSSHAFVDGFYYLPRIDRKLIQQYKEDLIVLTGNLYGEVPS
KVLNIGENQAEEALLWWKAEFGEDLYVELMRHNQEDENRVNPTLIKLAKKHNVKLVASNN
TYYRKQEDANAHDILLCVKDGEKQATPIGRGRGYRYGLPNQEYYFKSSEEMKKLFQDVPE
AIINIQEVVDKIDAFQLARDVLLPAFDIPDEFKHAEDEVDGGKRGENAYLRHLVYEGAKK
RYGEPLTDEVKERIDFELSVIENTGYPGYFLIVEDFIREARNMDVSVGPGRGSAAGSVAA
YCLWITNIDPLKYDLLFERFLNPDRISMPDIDIDFDDEGRGRVMQYVIDKYGSNQVAQII
TYGTMAAKSSIRDTARVLDLPLFDADRIAKLIPTMSKLGKIFGLDEKELGKKFRAEDLEK
VNELLNIADGSDLQAETVNLARTLEGSVRNTGIHACGVIITPDDITKFVPVATAKDSDLY
VTQFDNSVVESAGLLKMDFLGLKTLTLIKDTVKIVKAKHDIQLDPENFPLDDEKTYELFQ
RGETVGVFQYESPGMQKHLRDLKPTVFEDLIAMNALYRPGPMEYIPSFVRRKHGDEEIEY
DLPAMEEYLKETYGITVYQEQVMLLSQSLAGFTKGEADVLRKAMGKKQIAVLDKMKPKFI
EQASANGHDAKILEKVWKDWEAFASYAFNKSHSTCYAWIAYQTAYLKAHYPAEYMAAVLS
NNMNDIKQVTFFMEECKRMKLDVLGPDVNESYYKFSVNKDGAVRFGMGAIKGVGHGAVMT
IVENRKEGGPYKSIFDLAKRIDLRAANKKSFENLALAGGFDSLADTHRAQYFHDDGDGIT
FLEKAIKYAQKHKENENSAQVSLFGEASEVQIAEPEVPPCEEWGTMEKLSKEREVVGVYI
SGHPLDDFKTEMTTYCNATVGMFNNLEPYVNRELVFGGVVTDVQHRVSKQGKGWALFTIE
DYTDSFEFRIFGEEYLKFRHFLLKNSFVFVKTFVREGWVNKDTGKKSDPRLQFNNFQLLH
DVMEQYTKKLSIQVDIKDLNEQKIISLKELLSMHPGNQALNFLVYDTKEKMKLTMPSRRQ
KVKVCQELLSELEAQDVKFKLN
NT seq
4389 nt
NT seq
+upstream
nt +downstream
nt
atgtacttaattttcgatactgaaaccaccggattgcctaaacgctgggatgcaccaatt
acagatactgataattggcctaggtgtattcaaatcgcatggcaattgcacgatgccatg
ggtaattgtattgagagtcaagattttttagtaaaacccgaaggcttcaatattccttat
gacgcagagaaaattcatggcatttctaccgaattagcccaagagcaaggtatttcattg
gcagaagttttagaaaaatttaatgaagctttaggaaaaacaaaatttgtagtagggcag
aatgtgaaattcgacctaaatattatgggtgccgaatttgttcgtggtaatgttgaaaac
ccacttcaagaattaccggttttagatacgtgtactgagcacactgcggaaatgtgtcaa
attcctggaggtcgttatggtaagtttaaattaccaacattaaccgagttacacgaattt
ttattcaacgagccttttgatgaagcccacaatgctactgccgatgtggaggcgacaaca
cgatgctttttggaattgattcgtttaggtgaattcaccaaagaggagttggatgttcag
cctgattatttcgagaatttcaaaaaagaaaaccctgagagcattcagcttattggttta
aagcatatcaatcttaagaaggaaagtgctaaaattcgcgaacgcataaaaaaggctcaa
acgagtacaatctcttctgaagaaataaaacaaaatgtaggtgaactagccgatgttgat
tttgtgcatttgcataaccattctcagttttcggtattacaatctaccatgagtgttgct
gatattgttgctgcagcggcagaacataatatgccagctgtagccttaacagatcacgct
aacatgatgggggcgtttcattttgtaaatgccgtaaatagagtcaatagcggaataaaa
gcaaaaattgctgaagctgaagaaaaaggcgaaacaccaacggcaaaattaataaagcct
attgtaggttgcgagttttttgtttgtgatgatcatgaagataaaaccagaaaagataat
gggtatcaaattgttctgcttgctaaaaataaaaatggttaccataatttagctaaatta
tcgtctcatgcatttgtagacggattttattatttgccgagaattgacagaaagcttatt
cagcaatataaagaagacttgattgtgcttaccgggaatttatatggcgaagttccgagt
aaagtattaaatattggtgaaaatcaagctgaagaagcattgctatggtggaaagcagag
tttggtgaagatttgtatgtggagttaatgcgacacaatcaagaagatgaaaatcgagta
aacccaactttgattaagcttgcaaaaaagcacaatgttaagttggttgcatcaaataac
acgtattacagaaaacaagaagatgccaatgcacacgatattttactgtgtgtaaaagat
ggtgaaaaacaagccacacctattggtcgtggtcgtgggtatcgttacggtttgccaaat
caagagtattatttcaaatcttctgaggaaatgaaaaaattgtttcaggatgttcctgaa
gccattatcaatattcaagaagttgttgataaaattgacgcctttcaattagcacgtgac
gttttattacctgcgtttgatattccagacgagtttaaacatgctgaagatgaggttgat
ggcggtaagcgcggtgaaaatgcctatttaagacatttggtatacgaaggcgccaaaaaa
cgatatggtgaaccgcttactgatgaagttaaagaacgtatagattttgagctaagtgtt
attgaaaatacaggctatccaggttactttttaattgttgaagattttattcgcgaagcc
agaaacatggatgtttcggttggtcctgggcgtggttctgcggcaggatcggtagccgcc
tattgtttgtggattactaatatagacccgttaaagtacgatttactttttgagcgtttt
ttgaatccagatcgtattagcatgcccgatatcgatattgattttgatgatgaaggtcgt
ggtcgcgttatgcaatacgtgattgataaatatggtagtaaccaggtagcgcaaattatt
acttatggcaccatggctgccaaatcttcaattcgagatacggcacgtgttttagattta
ccgttgtttgatgccgatagaattgcaaagttaataccaaccatgtctaaactcggaaag
atttttgggttagatgaaaaggaattaggtaaaaaatttagagctgaagatttagagaag
gtcaatgagcttttgaatattgcagacgggagcgatttgcaagctgaaactgtaaattta
gcaagaacacttgaaggatcggttagaaacacaggaattcatgcttgtggagtgattatt
acgcctgatgatattaccaagtttgtacctgtagctactgctaaagattccgatttgtat
gtaacgcagtttgataactcggttgtggaatcagcaggactcctaaaaatggatttctta
ggacttaaaaccttaaccttaattaaggatactgttaaaattgtaaaggctaaacacgat
atacaactcgatccggagaattttcctttagatgatgaaaaaacctatgagcttttccaa
cgtggagaaacagtgggcgtcttccaatatgaatctcctggaatgcaaaagcaccttcgg
gacttaaaaccaacggtttttgaagatttaattgctatgaatgccttgtatcgtccgggg
cctatggaatacattcctagtttcgttagaagaaaacatggtgatgaagagatagaatac
gatttaccagccatggaagaataccttaaggagacttatggtattacggtatatcaagag
caagtgatgttattatctcaaagtttggcaggttttacaaaaggtgaagccgatgtattg
agaaaggcgatgggtaaaaagcaaattgcagttctcgataaaatgaaacctaaattcatc
gagcaagccagtgctaatggacatgatgctaaaatacttgaaaaagtttggaaagactgg
gaagcttttgcgagttacgcttttaacaaatcgcactccacatgttatgcgtggatagct
taccaaaccgcctatttaaaggcgcattaccctgcggaatatatggctgcggtactttcc
aataacatgaacgacatcaaacaagttactttctttatggaagaatgtaagcgtatgaag
ctagatgttttggggccagatgttaacgagtcgtattacaagttttcggtaaacaaagat
ggtgcggtacgttttggaatgggtgccataaaaggtgtaggtcatggtgcggttatgacc
attgtagaaaaccgaaaagaaggcgggccttataaatcaatatttgatttagcaaaacgc
atagacttaagagcagccaataaaaaatcctttgaaaatttagctttagctggaggattt
gatagtttagccgatacgcatagggcacaatattttcatgatgatggcgatggcattacc
tttttagaaaaggccattaagtatgcccaaaagcataaggaaaatgaaaattcggcgcag
gtaagtttgtttggtgaagctagtgaagtacagatagccgaacccgaagtccctccgtgt
gaggaatggggcacgatggaaaaactgagcaaagaaagagaagttgttggggtttacatt
tctggacatccgttagatgattttaaaactgaaatgacaacttattgtaatgccactgtg
gggatgtttaataatttggagccttatgtaaaccgagaattggtatttggtggtgtggtt
accgatgtacaacatcgagtaagtaaacaaggtaaaggatgggcgctatttactattgaa
gattataccgatagttttgagtttagaatttttggagaggagtatttaaaattcagacat
tttttattgaaaaatagttttgtatttgttaaaacctttgtgcgcgaaggctgggtgaat
aaggatactggaaagaaaagtgatccgaggttgcagtttaataattttcagttgttgcac
gatgttatggagcaatacaccaaaaaactctcgatacaggtggatataaaagatttaaat
gagcagaaaataatttcgttaaaagaattgctaagtatgcatccaggaaatcaagccctg
aattttttggtttatgataccaaggagaaaatgaaattaaccatgcctagtagaagacag
aaagtaaaagtttgtcaggaattgttgagcgaattggaggcgcaagatgttaagtttaaa
ttgaattaa
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