Algibacter luteus: O5O44_05935
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Entry
O5O44_05935 CDS
T09147
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
alut
Algibacter luteus
Pathway
alut03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
alut00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
O5O44_05935
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
alut03019
]
O5O44_05935
03009 Ribosome biogenesis [BR:
alut03009
]
O5O44_05935
Enzymes [BR:
alut01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
O5O44_05935
Messenger RNA biogenesis [BR:
alut03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
O5O44_05935
Ribosome biogenesis [BR:
alut03009
]
Prokaryotic type
rRNA helicases
O5O44_05935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
TssO
Motif
Other DBs
NCBI-ProteinID:
WJJ97929
LinkDB
All DBs
Position
complement(1403545..1405353)
Genome browser
AA seq
602 aa
AA seq
DB search
MNTFKDLGLNDDLLQAITDLGFTKPSEVQEKAIPILLNSETDLVALAQTGTGKTAAFGFP
MLQKIDVDSRTTQGLILSPTRELCLQITNEMKLYGKYCKGLNVVAVYGGSSITDQAREIK
RGAQIIVATPGRMKDMINRRLVDISKIQYSVLDEADEMLNMGFKEDITDILSHTPEDKNT
WLFSATMPREVATIAKKFMYDPEEITVGKKNESTSNVSHEYYLVNARDRYQALKRLSDAN
PDIFSVIFCRTKRDTQKVAENLIEDGYSAGALHGDLSQNQRDLVMKSFRNQQIQMLVATD
VAARGIDVDDITHVINYQLPDEIETYTHRSGRTGRAGKTGVSMVIVSKSEVRKIKSIERI
INQQFEKKEIPDGSEICEVQLMSLANKIHNTEINHEIDKHLASINELFADTDKDELIKKF
FSVEFTRFYNYYQKSKDLNVAESSSDREGGRDFSRGGKDSTRYFINVGGKDGFDWMKLKD
FLKEQLGLGRDDVFKVETKDSFSFFNTENELKEKVLAHFTDFKHEGRFVNVEVSENRGGG
GRRDRKGGGKRRDDKRGGGGRRDDRRSGSGNRSDRRKSEGSSKPRRSNSSDFASSRPRRS
RR
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgaacacattcaaagatttaggtcttaatgacgacctattacaagctattacagattta
gggtttacaaaacctagtgaagtacaagaaaaagccatccctattttattaaattctgaa
accgatttggtagcattagcccaaacaggtaccggtaaaaccgctgcttttggttttcca
atgctacaaaaaattgatgtagatagcagaactacgcaagggttaattttatcgcctacc
agagagctttgtttacaaattaccaacgagatgaaattgtatggtaaatattgtaaaggc
cttaacgtggttgcggtttacggcggatctagtattacagaccaagcgcgcgagattaaa
cgtggtgcccaaattattgtggcaactcctggacgtatgaaagatatgattaaccgtaga
ttggttgatatttctaaaatccaatattcggttttagatgaggccgatgagatgttaaac
atgggctttaaagaggatattactgatattttatcgcataccccagaagataaaaatacc
tggttattttcagcaacaatgccccgtgaggtggcaactattgctaaaaaattcatgtat
gaccctgaagaaattacggttggaaagaaaaatgaaagtactagtaacgtatcgcatgaa
tactatttagtgaatgcaagagaccgttaccaagcgttgaagcgtctatcggatgctaat
ccggatatcttttcggtaattttttgtagaacgaaacgtgatactcaaaaagttgctgaa
aacttaattgaggatggttatagcgctggcgcattacatggcgatttgagccaaaatcaa
cgtgatttagtaatgaaatcgtttagaaatcaacaaatacaaatgcttgtggctaccgat
gtggctgcacgtggtattgacgttgatgatattacacacgttataaactaccaattacca
gacgagattgaaacctatacacaccgttctggaagaacagggcgtgctggtaaaactggg
gtttctatggtgattgtttctaaaagtgaggtgcgtaaaataaaaagtattgagcgtatt
ataaaccagcaatttgagaaaaaggaaattcctgatggttctgaaatttgcgaggtgcaa
ttgatgtcgctagccaataaaattcacaacaccgaaataaaccacgaaatagataagcat
ttagcgagcataaacgaattatttgctgatactgacaaggatgaattgattaaaaaattc
ttctcggttgagtttacacgattctataattattaccaaaaatcgaaagacttaaatgtt
gctgaaagctctagcgatagagagggcggacgcgattttagtagaggcggaaaagattct
acacgttactttataaatgttggtggaaaagatggttttgattggatgaagttgaaagac
tttttaaaagagcaattagggcttggtagagatgatgtttttaaagtagaaactaaagat
agtttctcgttttttaacactgaaaacgaattaaaagagaaagttttagcgcattttacc
gactttaaacacgaaggccgatttgtaaatgttgaagtttctgaaaaccgtggcggtggc
ggaagacgcgacagaaaaggtggcggaaaacgacgtgacgataaacgcggtggcggtgga
agacgcgacgatagaagaagcggatctggaaaccgtagcgacagacgcaaaagcgaaggt
agctcgaaaccgagacgttctaattctagtgattttgcaagctctagaccaagacgctct
agacgataa
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