Algibacter luteus: O5O44_07585
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Entry
O5O44_07585 CDS
T09147
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
alut
Algibacter luteus
Pathway
alut03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
alut00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
O5O44_07585
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
alut03019
]
O5O44_07585
03400 DNA repair and recombination proteins [BR:
alut03400
]
O5O44_07585
Enzymes [BR:
alut01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
O5O44_07585
Messenger RNA biogenesis [BR:
alut03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
O5O44_07585
DNA repair and recombination proteins [BR:
alut03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
O5O44_07585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
HTH_9
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
WJJ98245
LinkDB
All DBs
Position
complement(1828874..1830778)
Genome browser
AA seq
634 aa
AA seq
DB search
MEHPINILERYWNFTSFRPEQEAIINAVIEGEDTFVLLPTGGGKSLCFQIPALAKKGICI
VISPLIALMKDQVQSLNDKGIKAMAITSGISYSQLDTLLDNCIYGNYKFLYLSPERLQQE
LVQDRIRQMHVNLIAVDEAHCISQWGSDFRPAYKNIALLRQLQPSVNLVALTASAKPDVV
QDIIKELDFLNPKIFKQSFLRPNLAYMVYHENDKYYRLETILKKYTAPSIVYVRNRKLTL
EISAFLESKKITATFYHGGLSNQEKDTNMSAWINNQKQVIVATNAFGMGIDKPDVKTVIH
LNLPESIESYFQEAGRVGRNGEKAFAVILKNKSDENLVKNQFLSVLPTVELVKQVYRKLC
SYFQISYGEGAYQTFDFDFNTYCKTYNFSPILCYNALLLLDRNSVITLSKQFKNKVTVQF
IITNNVLFNYLETHEQYNIIIKSILRLYGGIFDHITKVDLAKIAEKASTSENVIIKALQQ
LESDKIIDLNLAKTDAQITFIEPREDDKTINRIASIIEQQNKLKTQQVKAMLDYVENEAI
CKSMQLLNYFGEKNTKPCGICSVCINSNKSKSKTDKVSIKNQIIKLLEHGDLSSRALISE
LNCEEKEMKTVLKLLIEHNIISITSTNTYKLSHL
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atggaacacccaattaacattttagaacgttattggaattttactagttttagacctgag
caagaggctataattaatgccgttatagagggggaagacacatttgttctattacctact
ggtggcggaaaatcactttgttttcagatacctgctttagcaaaaaaaggcatttgtatt
gttatttctccacttatagccttaatgaaagatcaagtacaatctttaaatgataaaggc
attaaagccatggccataacaagtggcataagttatagtcaacttgatactttattagat
aattgtatttatggcaattataaatttttgtacctctcccctgaacgattgcaacaagaa
ttagtacaagaccgcatacggcaaatgcatgtgaatttaatagctgttgatgaggcccat
tgtatttcgcagtggggaagtgatttcagacctgcctataaaaacatagctttattaaga
caattacagcctagtgttaatctggttgcattaacggcttcagcgaaaccagatgttgtt
caagatatcataaaggaactcgattttttaaaccctaaaatattcaaacaatcgttttta
agacctaatttggcatacatggtttatcatgaaaacgacaaatactatcgtttagaaacc
atattgaaaaaatatacagcgccttcaatagtttatgtaagaaatagaaaattaacatta
gaaataagtgcctttttagaatcaaagaaaattacagcaaccttttatcatggagggctt
tcaaatcaagaaaaagacaccaacatgagtgcttggattaacaatcaaaagcaagtaatc
gtagcaacaaatgcttttggtatgggcatagacaagcctgatgtaaaaacggtaatacat
cttaatttaccagagagtattgaaagctattttcaagaagccggaagggttggaagaaat
ggtgaaaaagcatttgccgtaatactgaaaaataagagtgatgaaaatttggttaaaaat
cagttcttgagtgttttgccaactgtagaattggtgaagcaagtttatagaaaattatgt
agttattttcaaatatcctatggtgaaggcgcctaccaaacttttgactttgattttaac
acctactgtaaaacttataatttcagtcctatattatgttataatgcgcttttattgtta
gataggaatagcgtaattaccttatcaaaacaatttaaaaacaaagtaacggttcagttt
ataattacaaacaatgtcctttttaattatctggaaacacacgaacaatataatattatt
attaaatctattttaagactttatggaggaatttttgatcatataacaaaagttgattta
gcaaaaatcgctgaaaaagcatcaacttcagaaaacgtcattataaaagcattgcaacaa
ttagaaagtgataaaattatagatttaaatttagctaaaaccgatgcccaaatcaccttt
attgaacctagagaagatgataaaaccatcaatagaatagcgtcaattatagaacaacaa
aataaattaaagacgcagcaagtaaaagcaatgctagattatgttgagaatgaagcgatt
tgcaaaagcatgcaattgttgaactattttggcgaaaaaaacactaaaccctgcggcata
tgttccgtttgtataaattctaataaaagcaagtctaaaactgataaagtctccataaaa
aatcaaatcataaaattacttgaacatggcgatttatcttcaagggctttaatttcagaa
ttaaactgtgaagaaaaagaaatgaaaacggttttaaaactactaatagaacataacatt
ataagtattacatcaaccaacacatataaattaagtcatttatga
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