Algibacter luteus: O5O44_08135
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Entry
O5O44_08135 CDS
T09147
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
alut
Algibacter luteus
Pathway
alut03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
alut00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
O5O44_08135
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
alut03019
]
O5O44_08135
Enzymes [BR:
alut01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
O5O44_08135
Messenger RNA biogenesis [BR:
alut03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
O5O44_08135
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
Utp25_C
SNF2-rel_dom
Helicase_C_2
UTP25_NTPase-like
AAA_19
AAA_30
Motif
Other DBs
NCBI-ProteinID:
WJJ95189
LinkDB
All DBs
Position
complement(1939363..1940721)
Genome browser
AA seq
452 aa
AA seq
DB search
MTFSDLNLNTPLLNAINDLGYTIPTPIQEQAFNVVASGKDVVGIAQTGTGKTFAYMLPIL
KNLKYSEQENPRVLVLVPTRELVVQVVDEIEKLSKYINNRVLGVYGGTNINTQKKAIAEG
LDILVATPGRLYDLALTRVLQLKSIQKLVIDEVDVMLDLGFRHQLINIFDILPQRRQNIM
FSATMTQDVDLLINDFFKSPERVSIAVSGTPLENIAQKRYNVPNFYTKINLLVEMLQDEE
HFNKVLIFVAFKRMADKLFDKLDEHFKEELCVIHSNKTQNYRLRSIEQFRNGDNRILIAT
DVMARGLDIDNVSHVINFDTPDYPENYMHRIGRTGRAEREGEALVFTTEKDQEAIENIEA
LMKMTIPVEELPETVEISTELIEEERPQIKERNNPNKRSDEDAPGPAFHEKSAKNQKENL
GGSYKFKIAAKYKKPKTKGDKNYNRRNKNFKK
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
ttgactttttcagatttaaatttaaacacaccgcttcttaacgccataaacgatttaggt
tacacaatacctactccaatacaagaacaagcttttaacgtggtggcttcgggtaaagat
gtggttggaattgcgcaaactggtacagggaaaacctttgcctacatgttgcctatttta
aaaaacttaaagtattctgaacaagaaaatccaagagttttggttttagtaccaactcga
gaattagtggtacaagtggttgatgaaattgaaaagctatctaaatacattaacaatcgt
gttttaggtgtttatggaggcaccaacattaacacacaaaaaaaagctattgccgaaggt
ttagatatactagttgctacacctggtcgtttatacgatttggctttaacccgtgtttta
caattaaaatcaatacagaaattagtgattgatgaagttgatgtgatgctcgatttaggt
tttagacatcaacttatcaatatatttgatattcttccgcaacgaagacaaaatattatg
ttttcggcaaccatgacgcaagacgttgatttactaattaatgatttctttaaaagtcca
gagcgcgtttctattgctgtttcaggtacaccacttgaaaacattgcacaaaaacgttac
aatgttcctaatttttataccaaaattaatttgttggtagaaatgcttcaagatgaagaa
cattttaataaagtattaatttttgtggcgtttaaacgaatggcagacaaattgttcgat
aagctagatgaacattttaaagaggaattgtgtgttattcattctaacaaaacacaaaat
tataggctacgaagtatcgagcaatttagaaatggtgataaccgcattttaatagctacc
gatgttatggcacgtggtttagatatcgataatgtgagtcatgttattaattttgataca
cctgattacccagaaaactacatgcaccgtattggtagaactggtcgtgccgaacgtgaa
ggtgaagcactagtgtttactactgaaaaagatcaggaagctatagaaaatatagaagct
ttaatgaaaatgactattccggttgaagagcttcccgaaactgttgaaatttctaccgag
cttattgaagaagagcgtccacagataaaagaacgcaacaatccaaacaaacgtagcgac
gaagatgctccagggcctgcatttcatgagaaatcagctaaaaatcagaaagaaaattta
ggaggttcctataaatttaaaattgcggcaaagtataaaaagccaaaaactaaaggtgac
aagaattataaccgacgtaataagaattttaagaagtaa
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