Allochromatium vinosum: Alvin_0360
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Entry
Alvin_0360 CDS
T01168
Name
(GenBank) excinuclease ABC, B subunit
KO
K03702
excinuclease ABC subunit B
Organism
alv
Allochromatium vinosum
Pathway
alv03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
alv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Alvin_0360
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
alv03400
]
Alvin_0360
DNA repair and recombination proteins [BR:
alv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Alvin_0360
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Alvin_0360
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_22
AAA_16
AAA_30
AAA_33
UB2H
Ish1
SPD3_N
Kinesin
Motif
Other DBs
NCBI-ProteinID:
ADC61321
UniProt:
D3RN37
LinkDB
All DBs
Position
complement(423092..425110)
Genome browser
AA seq
672 aa
AA seq
DB search
MSNPSSPAFELVSPFAPAGDQPEAIRRLVEGLNDGEAGLTLLGVTGSGKTFTIANVIAQV
QRPALILAPNKTLAAQLYGEMREFFPRNAVEYFVSYYDYYQPEAYVPATDTYIEKDAAIN
EHIEQMRLSATKALLERRDVIIVATVSSIYGLGDPEAYLKMVLILKRGERIDQRAILRRL
AELQYTRNEIELSRGAYRVRGDVIDIHPAESDDEALRIALFDDEIETLSLFDPLTGEVRR
QVSRYTVFPKTHYATPRETILKAIDLIKPELRERLDWLRANDKLVEAQRLEQRTLFDLEM
MLEVGYCQGIENYSRYLSGRQPGEPPPTLYDYLPPDAILVIDESHVTVPQLGGMYRGDRS
RKENLVNYGFRLPSALDNRPLQFEEFQSRQPQTIYVSATPRAFEIEHSGAVIEQVVRPTG
LVDPEVEVRPALSQVDDLLSEIGPRVAADERVLVTTLTKRMAEDLTEYLDEHGVKVRYLH
SDIDTVERVEIIRDLRLGAFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSTDSLIQ
TIGRAARNANGKAILYADRITGSMQRAIEESERRRAKQIAANEAQGITPQTIRKAVADIL
EAHTPGAPMKAREYARVAEQVAEYGRLTPQQMAKRLKTLEKQMYQHAKNLEFEEAAAIRD
QIRELQARGLAA
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atgtccaacccgtccagtcccgccttcgaactcgtcagccccttcgccccggccggcgac
cagcccgaagccatccgccgtctggtcgagggcctgaacgacggcgaggccggcctgacc
ctgctcggcgtgaccggctcgggcaaaaccttcaccatcgccaacgtcatcgcccaggtc
cagcgtccggccctgatcctcgcacccaacaagacgctggccgcccagctctatggcgag
atgcgcgagttcttcccgcgcaacgcggtggagtatttcgtctcctattacgactactac
cagcccgaagcctatgtcccggcgaccgacacctatatcgagaaggacgccgcgatcaac
gagcacatcgaacagatgcgcctctcagcgaccaaggcgctgctggaacggcgcgacgtc
atcatcgtcgccaccgtctcgtcgatctacggtctgggcgatcccgaggcctatctgaag
atggtgctgatcctcaagcgcggcgagcgcatcgaccagcgcgccatcctgcgccggctc
gccgagctgcaatacacccgcaacgagatcgagctgtcgcgcggcgcctatcgcgtgcgc
ggcgacgtgatcgacatccatccggccgagtccgacgacgaggcgctgcgcatcgccctg
ttcgacgacgagatcgagacgctgtcgctgttcgatccgctcaccggcgaggtgcggcgg
caggtctcgcgctacacggtgttcccaaagacccactatgccaccccgcgcgagaccatt
ctgaaggccatcgatctcatcaaaccggaactcagggagcggctcgactggctgcgcgcc
aacgacaagctggtcgaggcccagcggctcgaacagcgcacattgttcgatctggagatg
atgctggaggtcggctactgccagggcatcgagaactacagccgctatctctccggacgc
caacccggcgagccgccgccgaccctgtacgactatctgccgcccgatgcgatcctcgtc
atcgacgagagccatgtcaccgtgccccagctcggcggcatgtatcgcggcgaccgctcg
cgcaaggagaatctggtcaactacggtttccggctgccctcggcgcttgacaaccgcccg
ctccagttcgaggagttccagtcacgccagccgcagaccatctatgtctcggccacgccg
cgcgccttcgagatcgagcactcgggcgcggtcatcgaacaggtggtgcgcccgaccggg
ctggtcgatcccgaggtcgaggtgcgcccggcgctcagtcaggtcgacgacctgctgtcc
gagatcggcccgcgcgtggccgccgacgagcgggtgctggtgacgacgctcaccaagcgc
atggctgaggatctgaccgagtatctcgacgagcacggcgtcaaggtgcgctatctgcat
tcggacatcgacaccgtcgagcgggtcgagatcatccgcgatctgcggctcggcgccttc
gacgtgctggtcggcatcaatctgctgcgcgaggggctggacatgcccgaggtgtcgctg
gtggcgatcctggatgccgacaaggaggggtttctgcgctcgaccgattcgctgatccaa
accatcggccgcgcggcgcgcaacgccaacggcaaggcgatcctctatgccgaccggatc
accggctcaatgcagcgcgcgatcgaggagagcgagcggcgccgcgccaagcagatcgcg
gcgaacgaagcccagggcatcacaccccagaccatccgcaaggcggttgccgacatcctg
gaagcccacacgcccggcgcaccgatgaaggcccgcgaatacgccagggtcgccgagcag
gtggccgagtacggtcgtctgacgccccagcagatggccaagcgtctcaagacgctggaa
aagcagatgtaccagcacgctaagaatctggagttcgaggaggcggcggcgattcgcgac
cagatccgcgagttgcaggcgcgaggactggccgcatga
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integrated database retrieval system
