Allochromatium vinosum: Alvin_0419
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Entry
Alvin_0419 CDS
T01168
Name
(GenBank) DNA polymerase III, subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
alv
Allochromatium vinosum
Pathway
alv03030
DNA replication
alv03430
Mismatch repair
alv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
alv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Alvin_0419
03430 Mismatch repair
Alvin_0419
03440 Homologous recombination
Alvin_0419
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
alv03032
]
Alvin_0419
03400 DNA repair and recombination proteins [BR:
alv03400
]
Alvin_0419
Enzymes [BR:
alv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Alvin_0419
DNA replication proteins [BR:
alv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Alvin_0419
DNA repair and recombination proteins [BR:
alv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Alvin_0419
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNAX_ATPase_lid
DNA_pol3_tau_5
AAA
RuvB_N
AAA_22
AAA_16
AAA_5
AAA_18
AAA_2
AAA_30
AAA_14
AAA_assoc_2
DUF3646
nSTAND3
Mg_chelatase
TsaE
PIF1
SKI
Rad17
AAA_24
AAA_28
AAA_19
ABC_tran
NACHT
ORC-CDC6-like
Herpes_Helicase
DUF7169
AAA_7
Motif
Other DBs
NCBI-ProteinID:
ADC61378
UniProt:
D3RN94
LinkDB
All DBs
Position
complement(479975..481624)
Genome browser
AA seq
549 aa
AA seq
DB search
MSYQVLARKWRPRSFDDMVGQQHVVRALSNALDRDQLHHAYLFTGTRGVGKTTLARILSK
ALNCEQGVGSHPCGVCSACREIDSGRFVDLLEVDAASRTKVDQTRELLENVPYAPARARF
KVYLIDEVHMFSSHSFNALLKTLEEPPPHVKFLLATTDPQKIPVTVLSRCLQLNLRRLLP
GEIADRLTYVLEHEGLAFEPAALPLLARAADGSLRDALSLLDQAIAFGGGRVIESETRAM
LGTVSGDLALDILDALADGDGAAVLGSVERVAAMTPDFAELLRELIGLLHRLALIQQVPA
TLTADDPDRTRLLALAGRLAPEDVQLFYQVALTGQADLPLAPDPRGGLEMVLLRALAFRP
APRATRMSDSPRTAATTEHAPTASVHPNVQASPVPLQPAGAPPQTEPGASESAPIQSGTP
TLETAADWQRLAARLSIGGIANQLAHNCAFREYSNGRLSLQLDPAAERLRAPSTVTRLKS
ALEQALGRSIELEIKVAHPEQETLAQRRTREAGERQQMAVEQMHADPVARSVRETFDADW
APGSIRPAD
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgtcctatcaagtgcttgcccgcaaatggcgtccccggtcgttcgacgatatggtcggg
caacagcatgtcgtgcgcgcgctctccaatgcgctcgaccgcgatcagctccaccacgcc
tatctgttcaccggcacccgcggcgtcggcaagaccacactcgcccgcatcctgtccaag
gcactcaactgcgagcagggcgtcggctcccatccctgcggggtctgctcggcctgtcgc
gagatcgatagcggtcgcttcgtcgatctgctcgaagtcgacgccgcctcgcgcaccaag
gtcgaccagacccgcgagttgctcgaaaacgtcccctatgctccggcgcgggcgcgcttc
aaggtgtacctcatcgacgaggtgcacatgttctcctcgcacagcttcaatgcgctgctc
aagactctggaggagccgccgccgcatgtgaagttcctgcttgcgaccaccgacccgcag
aagatcccggtcacggtgctctcgcgctgtctccagctcaatctgcgccggctgctgccg
ggcgagatcgccgatcggctgacctacgtcctggaacacgaggggctggcgttcgagccg
gccgccctgcccctgctcgcacgcgccgccgacggcagtctgcgtgacgcgctcagtctg
ctcgatcaggcgatcgccttcggcggcgggcgggtcatcgagtccgagacgcgcgccatg
ctcggcaccgtcagcggcgatctggcactcgacatcctcgacgcgctggccgacggcgat
ggcgctgccgtactggggtcggtcgagcgcgtggcggccatgacgcccgacttcgccgaa
ctgctgcgcgagctgatcggactcctgcaccggctggcgctgatccagcaggttccggcg
accctgacggcggacgacccggatcgcacacgtctgctggcgctcgccgggcggctggcc
ccggaggacgtgcaactcttctatcaggtggccctgaccggacaggccgatctgccgctg
gcgcccgatccgcgcggcgggctggagatggtcctgttgcgcgcactcgccttccggcct
gcgccccgtgcgacgcgcatgagcgacagccccaggaccgccgcaaccacggagcacgcg
ccaacggccagcgtgcacccgaacgttcaggcatcgccggtgccgcttcagccggccggc
gcaccgccacagactgaacccggcgcttcggagtcagcgcccatccagtccggcacgccg
acactcgagacggccgccgactggcagcggctcgccgcgcgtctgtcgatcggcggtatc
gccaatcagctcgcccacaattgcgcctttcgtgaatacagcaacggacggctcagcctc
cagctcgatccggccgccgagcgtctgcgcgccccgagcacggtgacgcgcctgaagagc
gcgctcgaacaggcactcggccgttcgatcgaactggaaatcaaggttgcgcaccccgag
caggagaccctggcgcagcggcgcacgcgcgaggccggagagcgtcagcagatggccgtc
gagcagatgcatgccgacccggtcgcccggtcggtgcgcgagaccttcgacgcggattgg
gcgccggggagcattcgtccagccgactga
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integrated database retrieval system
