Allochromatium vinosum: Alvin_0467
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Entry
Alvin_0467 CDS
T01168
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
alv
Allochromatium vinosum
Pathway
alv03030
DNA replication
alv03430
Mismatch repair
alv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
alv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Alvin_0467
03430 Mismatch repair
Alvin_0467
03440 Homologous recombination
Alvin_0467
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
alv03032
]
Alvin_0467
03400 DNA repair and recombination proteins [BR:
alv03400
]
Alvin_0467
Enzymes [BR:
alv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Alvin_0467
DNA replication proteins [BR:
alv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Alvin_0467
DNA repair and recombination proteins [BR:
alv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Alvin_0467
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
Intein_splicing
LAGLIDADG_3
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
PT-HINT
Hint
HROB
Motif
Other DBs
NCBI-ProteinID:
ADC61426
UniProt:
D3RNR6
LinkDB
All DBs
Position
533494..539703
Genome browser
AA seq
2069 aa
AA seq
DB search
MDPTFVHLHLHSEYSLVDGLVRIKPLVKTVAAAGMPAVAVTDQGNLFSLVRFYKAAVGAG
VKPIAGADLWVRNPEDANHPHRLVLLAQDEPGYRNLTRLISRGFVEGQHLGVAQVERDWI
LEAHQGLIALSGGPRGDVAEALLKGRDAIAEQRLDAWLSVFEDRYYLELMRTGRALEGEL
IESSVDLAIRRGVPVVATNDVRFLAAGDFEAHEARVCIHQGRTLDDPRRPRDYSEEQYLR
TPAEMAELFADLPEALENTVEIAKRCNLELKLGKNYLPVFPVPEGMTTDSFFAEQSRRGL
EWRLERILDRDAPDYAERRRVYEERLETELAVIIQMGFPGYFLIVADFIQWAKDNGIPVG
PGRGSGAGSLVAYALKITDLDPIEHELLFERFLNPERVSMPDFDIDFCMEGRDRVIDYVA
RKYGREAVSQIITFGTMAAKAVVRDVGRVMGHPYGFVDKIAKMVPFELGMTLEKALKESE
DLKRAYDQDEEVRAILDMARKLEGLTRNAGKHAGGVVIAPTVLTDFAPLYCEPGGANLVT
QYDKDDVEQVGLVKFDFLGLRTLTIIDWALKTINAGRAAKGEPPLDIERIDPRDQEAFDL
LKRCETTAVFQLESRGMKELIKKLQPDCFDEITALVALFRPGPLQSGMVDDFIERKHGRA
EVAYPHPDLEPILKPTYGIILYQEQVMQIAQVLAGYSLGGADILRRCLAGSTEVVDAATG
RRVTLSEIAAAPEVWIGREVFALDLKTQKIVHQPIDAVYHNGVQEVFEVTTRTGRRIQAT
ATHLFYTLMGWKPLGAFQPGDRIGLAGTLPIEHGCGITDAQIKLTAYLLGDGHLSTRKPA
NCYFCNSDPALIADFNRCVAELFGRSAPVDYQLHPGRQSVGYVRVGCLSEFNAWIDSHIQ
RAHSHDKVIPDWVDALSRDQLRLFIGTLWSTDGTFDTSIGHADYTSTSRRMIEQLQHLLL
RLGIVALFNIKTIQYQGQPHRSYRAQITGREEMLKFYDRIQPFLSRRKQDKAEICYRMIR
DKARNQSKHTIPAEVIGLIANAKYASGMTWAEIDQAVGMRPGTMSSGLNFKIPPRRALAR
HRVLNFATAFKSDELRAIADSEVFWDVIESIRPLGQMEVFDLTIPKHHNFIANDFIAHNC
MGKKKPEEMAKQRDTFEQGALARGIDGQLSSHVFNLIEYFSGYGFNKCIVGETLVADPAT
GERRKVKEIYRNGIASVASLMPDHRMGRSSVVQVMENGIKPVFRLRTSLGKTLRATGNHP
LLTASGWKRLDELKEGDRIASPSRLPIEGQERWSEHELITLGWVLSEGNTCHPSGFYFYN
KDEVARDDFLAAASAFPDTQPTVRLRPERADTWCVYVGTGRDTRIRVGGGYSFTPRSGAR
LWLEDLGMIGHKAPDKHFPASVFRLDNACLAVLLGRLWSGDGYIASTSGKDMIPYLASAS
QRLAGETQHLLLRLGIVSRLTEKRFAYKDGRIGYTLHLVGRRSIEAFVQVIGPHLVGRDV
QLNALRDYLAQTPADRESVDTLPPEVKDSVRCHKEASGLTWDQIAERSGVCVKEFYGTPK
THKKGFRRATIRKLADFFGADDLRQAANAEIFWERIVAIEPDGAAMTYDLEVDHTHNFVA
DDIIVHNSHSAAYALVSYQTLWLKAHYPAAFMAAVLSADMDNTDKVVTLIDECRTMKLRV
DPPAINRSDYHFTIADDKTVVYGLGAVKGVGESAIEAMLEARRAGGSFRDLWDFCGRIDL
QRVNRRVLESLIRAGALDELGPNRATLMAHLPLALKAAEQYHSTRAAGQVDLFGALEPSG
PPTPDPQLARETLADWEDEQRLQGEKETLGLYLTGHPIDRYEDELKAMGGARIARLLETD
RELGRRDRRDREKRTVVGLVVGVRHGKTQRGRMGSVVLDDRTGRIEATVFSELYEQARHL
LVADQILSITGALNFDEFRDAWSLRADSVRTFEDARATAADHLLLTLDLSDPAVHARGPE
RVEELRAVLLAHRDTARETSVPIRLIYRRPGAVGELMLGSAWRVRPADALLKQLRQLLGA
ESVRVSYERPVQQAAMSELQSPPRLRVVS
NT seq
6210 nt
NT seq
+upstream
nt +downstream
nt
gtggacccaaccttcgtacatctgcatctgcattccgagtattcactggtcgatggcttg
gtgcgcatcaagccgctggtcaagacggtcgcggcggccgggatgccggcggtcgccgtc
accgatcagggcaatctgttctcgctggtgcgcttctacaaggccgccgtgggcgccggg
gtcaagccgatcgcgggtgccgatctctgggtgcgcaatcccgaggacgccaatcatccg
catcgactggtgctgctggcgcaggacgagccgggttatcgcaacctgacgcggctgatc
tcgcgcggcttcgtcgaaggccagcatctgggcgtggcgcaggtcgagcgcgactggatc
ctggaggcgcatcaggggttgatcgcgctctcgggcgggccgcgcggtgacgtggccgaa
gcgctgctcaaggggcgggacgcgatcgccgagcagcggctcgatgcctggctgtccgtg
ttcgaggatcgctattacctggagctgatgcgcaccgggcgcgcgctggaaggcgagctg
atcgagtcgagcgtggatctggcgatccggcgcggcgtgcccgtggtggcgaccaatgac
gtgcgctttctggccgccggcgacttcgaggcccatgaggcgcgtgtctgcatccatcag
ggtcgcacgctcgatgacccgcgccgcccgcgtgactacagcgaggagcagtatctgcgc
accccggccgaaatggccgagctgttcgccgatctgcccgaggcgctggagaacacggtc
gagatcgccaagcgctgtaacctggaactcaagctcggcaagaactatctgccggtgttc
ccggtgcccgagggcatgaccaccgacagcttcttcgccgagcagtcgcgccgggggctg
gaatggcgtctggagcgcattctcgaccgcgacgcgcccgattatgccgagcggcgccgg
gtctacgaggagcggctcgaaaccgagcttgccgtcatcatccagatgggctttcccggc
tacttcctgatcgtggccgatttcatccagtgggccaaggacaacggcatcccggtcggg
ccggggcgcggttcgggcgcgggatcgctggtcgcctatgcgctcaagatcacggatctc
gacccgatcgagcatgaactgctgttcgagcgctttctgaaccccgagcgcgtgtccatg
cccgacttcgatatcgacttctgcatggaagggcgcgatcgggtcatcgactatgtggcg
cgcaagtacgggcgcgaggcggtgtcgcagatcatcaccttcggcaccatggcggccaag
gcggtggtgcgcgatgtcgggcgcgtcatggggcatccttacggcttcgtcgacaagatc
gccaagatggtgcccttcgagctggggatgacgctggagaaggcgctcaaggagagtgag
gatctcaaacgtgcctatgatcaggacgaggaggtgcgggccatcctcgacatggcgcgc
aagctggaggggctgacccgcaacgccggcaagcacgcgggcggcgtggtgatcgcgccc
acggtgctgaccgatttcgcgccgctctattgcgaaccgggcggggcgaacctggtcacg
cagtacgacaaggacgatgtggagcaggtcgggttggtcaagttcgacttcctgggattg
cgcacgctcaccatcatcgactgggcgctcaagaccatcaatgccgggcgtgcggccaag
ggcgaaccgccgctcgacatcgagcgcatcgatccgcgcgatcaggaggcgttcgacctg
ctcaagcgctgcgagacgacggcggtgttccagctcgaatcgcgcggcatgaaggagctg
atcaagaagctccagcccgattgcttcgacgagatcacggcactggtggcgctgttccgg
ccagggccgctgcaatcgggcatggtcgacgacttcatcgagcgcaagcatggacgtgcc
gaggtcgcctatccgcatccggacctggagccgattctcaagcccacttacggcatcatt
ctgtatcaggagcaggtgatgcagattgcgcaggtgttggcggggtattcgcttggtggg
gcggatattctgcgtcgctgtctggccggctcgaccgaagtggtcgatgccgcgaccggg
cggcgggtgacgctgagcgagatcgccgccgcgcccgaggtctggatcggacgcgaggtg
ttcgcgctcgacctgaagactcagaagatcgtgcatcagccgatcgacgctgtttatcac
aatggcgtgcaggaggtcttcgaggtcacgacccgcaccggacgccggattcaggccaca
gcgacgcatctgttctatacgctcatggggtggaagccgctgggggcctttcagccgggt
gatcggatcgggttggctgggacgctgccgatcgagcatgggtgtgggattacggatgct
cagatcaaactcacggcttatctattgggcgatggccatctctcgacccgaaagccagcg
aactgttatttctgcaatagcgatccggcgctgatcgccgatttcaaccgctgtgtggcc
gaactgttcggtcggtcggcccccgtcgattatcagctccatccggggcggcagtcggtc
ggttatgtgcgcgtcggctgtctgtcggagttcaatgcctggatcgattcgcacatccag
cgcgcccattcgcacgacaaagtcatccctgactgggtcgatgcgttgtccagggatcag
ttgcgtctgttcatcggcacgctctggtcgacggatgggacgttcgataccagcatcggt
cacgccgattacacctcgacctcgcgcagaatgatcgagcagcttcagcatcttttgctg
cggctcggcatcgttgcgctgttcaatatcaagaccattcaatatcaggggcaaccgcat
cgttcttatcgagcgcagatcaccggccgcgaggaaatgctgaagttctatgacaggatt
cagccgttcttgagtcgccgcaagcaggataaggctgaaatctgttatcggatgattcgt
gacaaggccaggaaccaatccaagcatacgattccggctgaagtcattggcctgattgcc
aatgccaaatatgccagcggcatgacctgggctgagatcgatcaggctgtcggcatgcgg
cctggaaccatgtcgtcgggtcttaatttcaagatcccaccacgtcgcgcgctcgccaga
catcgcgtcctgaattttgcgacggcctttaaaagcgacgaactacgcgctatcgctgac
tcagaggtcttttgggatgtgatcgagtcgatccgtcccttgggtcagatggaggtattc
gacctcactatccccaaacatcacaattttatcgccaacgattttattgcccacaattgc
atgggcaagaagaagcccgaggagatggccaagcagcgggataccttcgaacagggggcg
ctggcgcgtggaatcgatggccagctttcatcgcatgtctttaatttgatagagtatttt
tcaggttacggattcaataagtgtattgttggcgaaacactcgttgccgacccggcgacc
ggcgagcgtcgcaaggtcaaggagatctaccgtaacggtatcgcctcggtcgccagtctg
atgccggatcaccgcatgggccggagttcggtggtccaggtgatggagaacggcatcaag
ccggtctttcggctcagaacctcgctgggcaagacgctgcgtgcgaccggcaatcatccg
ctcctgacggcgagtggctggaagcgtctggatgagctgaaggagggcgaccgcattgcc
tcaccgtcacggctgccgatcgagggccaggaacgctggtccgagcacgaactcatcacg
ctgggctgggtcttgtcggagggcaatacctgtcatccgagcggcttctatttctacaac
aaggatgaagtcgccagagatgatttcctggctgccgcgagcgcctttcccgatacgcaa
cccacggtgcgtctcaggccggaacgggctgatacctggtgcgtctatgtcggaaccggg
cgcgatacgcgcattcgtgtcggcggtggttatagcttcacaccgcgctcgggcgcgcgt
ctgtggctcgaagatctgggcatgatcggtcacaaggcgccggacaagcattttcccgcc
agtgtgtttcgcctcgacaacgcctgcctagcggtcttacttggacggctctggtctggg
gatggctatatcgccagtacctcagggaaagacatgatcccctatctggcgagtgcttct
cagcgtctcgccggcgagactcagcatctgctgttgcgcctgggtatcgtcagtcgactg
accgaaaagcgctttgcttataaggatggacgcatcggttatacgctccatctcgtcggg
cgacgcagtatcgaagccttcgtccaggtcattggtccgcatctggtcggacgagatgtc
cagctcaatgccttgcgtgactatctagctcagacacctgccgatcgggagtcggtcgac
acgcttccgccagaggtcaaggacagcgttcggtgtcacaaggaggctagcggtctgact
tgggatcaaatcgccgaacgcagtggcgtatgcgtcaaggagttctatggcacgcccaag
acgcacaaaaaaggctttcgtcgcgccacgatccgcaagctggctgatttcttcggggcc
gacgatctgagacaggccgccaacgccgagatcttctgggagcgtatcgtcgccatcgaa
cccgatggcgcggccatgacctatgacctggaagtcgaccacactcataacttcgttgcc
gacgacatcatcgtccataactcacactcggccgcctacgccctagtcagctaccaaacc
ctctggctcaaggcgcactatccggccgccttcatggccgccgtgctctcggcggacatg
gacaacaccgacaaggtcgtcaccctgatcgacgaatgccggacgatgaagctcagggtc
gatccgccggccatcaatcgctccgactatcacttcaccatcgccgacgacaagaccgtc
gtctatggcctgggcgcggtcaagggcgtgggcgagtcggcgatcgaggccatgctggag
gcgcgtcgagccggcggttccttccgcgatctctgggatttctgcggacgcatcgacctg
caacgggtcaaccgccgcgtgctggagtcgctgatccgcgccggtgcgctcgacgaactc
ggacccaaccgcgccacgctcatggcgcatctgccgctggcgctcaaggccgctgagcag
tatcacagcacccgcgcggccggtcaggtcgatctgttcggcgcgctcgaacccagcggc
ccgcccacgcccgatccgcagctcgcccgcgagaccctcgccgactgggaggacgaacag
cgtctccagggtgaaaaggagacgctcggactctatctcaccggacatccgatcgaccgc
tacgaggacgaactcaaggcgatgggcggggcgcgtatcgcccgcttgctggagaccgat
cgcgaactcggacgccgcgaccggcgcgatcgcgaaaaacgcaccgtcgtcgggctggtg
gtcggtgtgcggcatggcaagacccagcgcggacgcatgggatcggtggtgctcgacgac
cgcaccggacgcatcgaggccacggtcttctccgaactctatgaacaggcgcgtcatctg
ctggtcgccgaccagatcctgagcatcacgggcgcgctcaacttcgacgagttccgcgac
gcctggtcgctgcgcgccgacagcgtgcgcaccttcgaggacgcgcgcgcgaccgccgcc
gatcatctgctcctgacgctggatctgtccgatccggccgtccatgcgcgtggaccggag
cgggtcgaggaactgcgcgcggtgctgctcgcccatcgcgacacagcgcgcgagaccagt
gtgccgatccggttgatctaccgtcgtcccggtgcagtcggcgagctgatgctgggaagc
gcctggcgcgttcggccggccgatgccctgctcaagcagttgcgccagttgttgggagcc
gagagtgtccgcgtctcttacgagcgcccggtccaacaggcggccatgtctgagttacag
tcgccgccgcgattgcgggtggtgtcctga
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integrated database retrieval system
