Allochromatium vinosum: Alvin_0504
Help
Entry
Alvin_0504 CDS
T01168
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
alv
Allochromatium vinosum
Brite
KEGG Orthology (KO) [BR:
alv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
alv03016
]
Alvin_0504
Enzymes [BR:
alv01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Alvin_0504
Transfer RNA biogenesis [BR:
alv03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Alvin_0504
Prokaryotic type
Alvin_0504
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
ADC61461
UniProt:
D3RNV1
LinkDB
All DBs
Position
581559..582476
Genome browser
AA seq
305 aa
AA seq
DB search
MGRRRNSGRPVTGILLLDKPLGLSSNEALQRVKRYYRAAKAGHTGSLDPLATGLLPCCLG
DSTKFSAFLLDADKRYRVRVRLGETTATGDAEGEVLERAPIDGVTEARLREVLADFLGPI
DQLPPMYSAVKHQGQRLYELARQGLEVERQPRRIEIHALELLSMELPEIELDVHCSKGTY
VRTLAEDIGRELGCGAHVSALRRTGVGPYAEPDVSFVTGEQIAALAEAEDFAALDALLLP
LDSALGHCPALKLSADTAFYLGQGQAVQVPQAPTEGLVRLYDPSSHFLGVGEIRDDGKVQ
PKRLI
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgggacgccgccgtaattcgggacgccccgtgaccgggatcctgctgttggacaagccg
ctgggtctgtcctcgaacgaggccctgcaacgggtcaagcgttattatcgcgccgccaag
gcggggcataccgggagtctggaccccttggcgaccgggctgctgccctgttgtctgggc
gactcgaccaagttctcggcctttctgctggatgccgacaaacgctatcgcgtgcgtgtg
cgtctgggcgagaccacggccacgggcgatgcggaaggtgaagtgctggagcgcgcgccg
atcgatggcgtgaccgaagcccgtctgcgtgaagtgctagccgattttcttggtcccatc
gatcagttgccgcccatgtattcggcggtcaagcatcagggccagcggctctatgagctg
gcgcgtcagggtctggaagtcgagcgccagccgcgccgcatcgagatccatgcactcgaa
ctgctgtcgatggagctgcccgagatcgaactcgacgtgcactgttccaagggcacctat
gtccgcaccctggccgaggacatcggccgcgaactcggttgcggcgcccatgtgagcgcc
ctgcgccggaccggcgtcggcccctatgccgagccggacgtgagcttcgtcaccggcgag
cagatcgccgcgctggccgaggccgaggatttcgccgcgctcgacgccctgctgctgccg
ctcgacagcgcgctcggacactgcccggccctgaaactctcggccgacaccgccttctat
ctcgggcagggacaggcggtgcaggtgccccaggcgccgaccgaaggtctggtccggctc
tatgatccctcgtcgcacttcctgggtgtcggcgagatccgcgacgacggaaaagtccaa
cccaaacgattgatttga
DBGET
integrated database retrieval system
