KEGG   Allochromatium vinosum: Alvin_0656
Entry
Alvin_0656        CDS       T01168                                 
Name
(GenBank) CRISPR-associated helicase Cas3
  KO
K07012  CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
Organism
alv  Allochromatium vinosum
Brite
KEGG Orthology (KO) [BR:alv00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:alv02048]
    Alvin_0656
Enzymes [BR:alv01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Alvin_0656
Prokaryotic defense system [BR:alv02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Type I signiture cas proteins
    Alvin_0656
SSDB
Motif
Pfam: Cas3_HD Cas3-like_C_2 DEAD Helicase_C ResIII PhoH AAA_19 UvrD-helicase
Other DBs
NCBI-ProteinID: ADC61605
UniProt: D3RPM3
LinkDB
Position
complement(768865..771498)
AA seq 877 aa
MLSKDYWRYWAKADTGVEGANKWHPFAYHSLDAAVIAATFWRDSSAVRRTLMAAFDVEEA
EIQRLLAWILFFVALHDIGKLHALFQIKAPHILPQIWPDLASTKLIDTSGGHYDHGREGY
RLSMAELRGWFKPASRHALKAWSSWLAAVTGHHGEIPDNDDPLPAYAEATILEQDANARR
AWIQEAADLFLHPAGLSLEDPPPPCVTEARNLLAGFCSLCDWIGSNVDVFAYAPPALSPN
DYLHSRLEQIRRDDILRHFGLIATPLAYQGIPALLKTDEHPRGTQVMIDDLPLVPGLTIV
EAPTGSGKTEAALAYAWRLIDAGLAESIVFALPTQATANAMLGRCETFSKSAFGRANLVL
AHGHSRLNQAYQRLIEAGSKRTAQGETEAGVQCAAWLASSRKRVFLGQIGVCTVDQVLLS
VLPVRHNFVRAFGLHRSVLIVDEVHAYDAYMNGLLIEVLKRQKAVGGSAILLSATLPASI
RGKLLESWGHEPVADVANYPAIWNTAALSESDSPLSLPDTERPAQRTIEVSLSKLGGACP
DEPLIQRIIDAAESGALVGIVMNTVDDAQQLWIQLHKNAQVPVDLFHARFRLQDRQRIEQ
RVIEHYGRDAERTQGRILVATQVIEQSLDLDFDWLITQLCPVDLLFQRLGRLHRHSRKRP
DDFQVPTCTVLSVETDDYGLHELIYGDARLLWRTEFLLARHKQIHFPAAYREWIEPVYGE
APWDDEPGTVYGKHLAWRDDQSEAEKKAHRLTTMNLSKFRDDEERLTSLTRDGEMSLSVL
LTREDGRLLDGEDPDQMDEYTQAETLMLNTVPAPHSWGDRQLAGHVRDEDGRIRLKMHDD
GQQRWSSLDGGVCYTTELGLAKAETAGLMDPPTEAPR
NT seq 2634 nt   +upstreamnt  +downstreamnt
atgttatccaaggactattggcgttattgggcgaaggcagatacgggagtcgaaggggcc
aacaaatggcatcccttcgcttaccattccctcgatgcagcagtaattgcagcaacgttt
tggcgagattcgtcggcagtccgccgtactctcatggctgcctttgacgtggaagaggcg
gaaattcagcggcttctggcgtggatcctgtttttcgtcgcactccatgacatcggaaag
ctgcacgcgctgtttcagatcaaagccccccatatcctgcctcagatctggcccgatcta
gcctcgacgaagctgatcgatacctcgggcggacactacgatcatggccgtgaaggatac
cgtctgtcgatggccgagcttcgcggttggttcaaacccgcaagccgtcacgcattgaaa
gcttggtcctcgtggcttgccgccgtgacggggcatcacggagagatcccggataacgac
gatcctcttcctgcttatgccgaagcgactatattggagcaagacgccaatgcgcgccgt
gcatggatccaggaagcggccgatctcttcctccacccggctgggttgagcctcgaagat
ccaccaccgccatgcgtaaccgaagcccgaaacctgctggcgggattctgtagtctgtgc
gactggataggctccaatgtcgacgtctttgcctacgccccgcctgcactctctccaaac
gactatttgcattcacgcttggagcagatcagacgcgacgatatcttgaggcacttcggg
ctgatcgccacgccgctggcctatcagggaatcccggctctgctcaaaaccgacgagcat
ccgcgcggcactcaggtcatgatcgacgatctgccgcttgttccaggactgacgatcgtt
gaagctcccacgggcagcggcaagaccgaagcggcattggcctacgcctggcgcctgatc
gatgccggactggccgagtcgatcgtcttcgcgcttcccactcaggccacggcaaacgcg
atgcttggacgttgtgaaaccttctccaagagcgcctttggtcgcgcgaatctggttctg
gctcatgggcatagtcggctgaatcaggcgtaccaacggcttatcgaggccggatccaaa
cgcacggctcagggcgagaccgaggccggcgtccagtgtgccgcctggctggccagcagc
cgcaagcgtgtcttcctgggacagatcggcgtctgcacggtcgatcaggtcttgctgtcc
gtcctgccggtcagacacaatttcgtccgggctttcgggctgcaccgctccgttctgatc
gtcgacgaggtgcatgcctatgatgcctacatgaatgggctgctgatcgaggtgctcaag
cgccagaaggcggttgggggaagcgccatcctgctgtcggcgaccttgcccgccagcatt
cgcggcaagcttttggaatcatgggggcacgaaccagtcgcggatgtcgccaattatccg
gccatctggaatacggccgcgctatccgaatccgactcacccttgagcttgccggacacc
gagcgcccggcccaacgcaccatcgaagtcagcctctccaaactgggcggtgcttgcccc
gacgagccgctcatccaacgtatcatcgacgcagccgaatccggtgccctggttggcatc
gtgatgaacacggtcgacgatgctcagcaactctggattcagctccacaagaatgcccag
gtgcccgtcgatctcttccatgcccgcttcaggctccaggaccgacagcgtatcgagcag
cgggtgatcgagcactacggacgtgacgccgaacggactcaaggacgcatcctggtcgcg
acccaggtcatcgagcagagcctcgatctggacttcgattggctcatcactcagctctgc
ccggtcgacctcctattccagcgtctcggacgcttgcacagacactcgcgcaaacgtccc
gatgatttccaggttcccacctgcaccgtcctgtcggtcgaaacggacgattacggtctg
catgaactgatctacggcgatgcacgcctgctgtggcgaaccgagttcctgctggcccgg
cacaagcagatccattttccagcagcctatcgggaatggatcgagcctgtctatggagaa
gctccctgggatgatgagcctgggaccgtctatggcaaacatctggcgtggcgggacgac
caaagcgaggcagaaaagaaagcacatcgtctcacgaccatgaacctgagcaaatttcgc
gacgacgaagagcgcctgacctcgctcacacgagatggcgaaatgagcttatccgttctg
ctgactcgagaggatggtcgcctgctggacggcgaagatcctgaccagatggacgaatac
acccaagctgaaacgctcatgttgaacacggttcccgcaccgcacagttggggcgacagg
cagcttgcgggccacgtccgcgatgaggatggccgcattcggctcaagatgcatgacgac
ggccaacaacgctggagtagccttgatggaggagtctgctacacgactgagcttggcttg
gccaaagcagaaacggcgggcctcatggacccgccgacggaggcaccccgctaa

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